RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	GNRHR	P30968	328 aa		13.43	□□□□□ -0.26
MRPL28-203	ENST00000429738	TAS2R20	P59543	309 aa		13.43	□□□□□ -0.26
MRPL28-203	ENST00000429738	LCN12	Q6JVE5	192 aa		13.43	□□□□□ -0.26
MRPL28-203	ENST00000429738	CCDC140	Q96MF4	163 aa		13.43	□□□□□ -0.26
MRPL28-203	ENST00000429738	VCX3A	Q9NNX9	186 aa		13.43	□□□□□ -0.26
MRPL28-203	ENST00000429738	IFT46	Q9NQC8	304 aa		13.43	□□□□□ -0.26
MRPL28-203	ENST00000429738	EHF	Q9NZC4	300 aa		13.43	□□□□□ -0.26
MRPL28-203	ENST00000429738	FBXL7	Q9UJT9	491 aa		13.43	□□□□□ -0.26
MRPL28-203	ENST00000429738	DPPA5	A6NC42	116 aa		13.42	□□□□□ -0.26
MRPL28-203	ENST00000429738	PPP5D1	E7EU14	171 aa		13.42	□□□□□ -0.26
MRPL28-203	ENST00000429738	NDUFB8	O95169	186 aa		13.42	□□□□□ -0.26
MRPL28-203	ENST00000429738	RFX2	P48378	723 aa		13.42	□□□□□ -0.26
MRPL28-203	ENST00000429738	OR2B8P	P59922	312 aa		13.42	□□□□□ -0.26
MRPL28-203	ENST00000429738	TMEM69	Q5SWH9	247 aa		13.42	□□□□□ -0.26
MRPL28-203	ENST00000429738	TMEM17	Q86X19	198 aa		13.42	□□□□□ -0.26
MRPL28-203	ENST00000429738	SAMD12	Q8N8I0	201 aa		13.42	□□□□□ -0.26
MRPL28-203	ENST00000429738	SLC25A46	Q96AG3	418 aa		13.42	□□□□□ -0.26
MRPL28-203	ENST00000429738	MOB3A	Q96BX8	217 aa		13.42	□□□□□ -0.26
MRPL28-203	ENST00000429738	PLEKHA2	Q9HB19	425 aa		13.42	□□□□□ -0.26
MRPL28-203	ENST00000429738	IGLV11-55	A0A075B6I3	123 aa		13.41	□□□□□ -0.26
MRPL28-203	ENST00000429738	TRAV3	A0A0B4J244	114 aa		13.41	□□□□□ -0.26
MRPL28-203	ENST00000429738	LGALS9	O00182	355 aa		13.41	□□□□□ -0.26
MRPL28-203	ENST00000429738	UPK2	O00526	184 aa		13.41	□□□□□ -0.26
MRPL28-203	ENST00000429738	GGCT	O75223	188 aa	Known RBP	13.41	□□□□□ -0.26
MRPL28-203	ENST00000429738	DHFR	P00374	187 aa		13.41	□□□□□ -0.26
MRPL28-203	ENST00000429738	PLEC	Q15149	4684 aa	Known RBP	13.41	□□□□□ -0.26
MRPL28-203	ENST00000429738	OR51H1	Q8NH63	302 aa		13.41	□□□□□ -0.26
MRPL28-203	ENST00000429738	CD300LF	Q8TDQ1	290 aa		13.41	□□□□□ -0.26
MRPL28-203	ENST00000429738	BORCS5	Q969J3	196 aa		13.41	□□□□□ -0.26
MRPL28-203	ENST00000429738	HRASLS	Q9HDD0	168 aa		13.41	□□□□□ -0.26
MRPL28-203	ENST00000429738	IGLC7	A0M8Q6	106 aa		13.4	□□□□□ -0.26
MRPL28-203	ENST00000429738	S1PR2	O95136	353 aa		13.4	□□□□□ -0.26
MRPL28-203	ENST00000429738	HLA-A	P01891	365 aa	Known RBP	13.4	□□□□□ -0.26
MRPL28-203	ENST00000429738	HIST1H1B	P16401	226 aa	Known RBP	13.4	□□□□□ -0.26
MRPL28-203	ENST00000429738	HERV-K104	P61576	105 aa		13.4	□□□□□ -0.26
MRPL28-203	ENST00000429738	AADACL3	Q5VUY0	350 aa		13.4	□□□□□ -0.26
MRPL28-203	ENST00000429738	GTSCR1	Q86UQ5	136 aa		13.4	□□□□□ -0.26
MRPL28-203	ENST00000429738	GPHB5	Q86YW7	130 aa		13.4	□□□□□ -0.26
MRPL28-203	ENST00000429738	CMTM3	Q96MX0	182 aa		13.4	□□□□□ -0.26
MRPL28-203	ENST00000429738	SRSF8	Q9BRL6	282 aa	Known RBP	13.4	□□□□□ -0.26
MRPL28-203	ENST00000429738	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.4	□□□□□ -0.26
MRPL28-203	ENST00000429738	TMEM140	Q9NV12	185 aa		13.4	□□□□□ -0.26
MRPL28-203	ENST00000429738	COMMD9	Q9P000	198 aa		13.4	□□□□□ -0.26
MRPL28-203	ENST00000429738	C2orf70	A6NJV1	201 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	OR2C1	O95371	312 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	PMP2	P02689	132 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	REG1A	P05451	166 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	EIF4E	P06730	217 aa	Known RBP	13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	EDN2	P20800	178 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	PRSS3	P35030	304 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	TAS2R46	P59540	309 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	NCS1	P62166	190 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	DEFB114	Q30KQ6	69 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	CD300E	Q496F6	205 aa	Predicted RBP	13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	LYSMD2	Q8IV50	215 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	LAX1	Q8IWV1	398 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	GPX8	Q8TED1	209 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	EEF1AKMT3	Q96AZ1	226 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	FUNDC2	Q9BWH2	189 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	FXYD6	Q9H0Q3	95 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	ZC4H2	Q9NQZ6	224 aa		13.39	□□□□□ -0.27
MRPL28-203	ENST00000429738	ZNF785	A8K8V0	405 aa		13.38	□□□□□ -0.27
MRPL28-203	ENST00000429738	PGLYRP1	O75594	196 aa	Predicted RBP	13.38	□□□□□ -0.27
MRPL28-203	ENST00000429738	IGHV3-23	P01764	117 aa		13.38	□□□□□ -0.27
MRPL28-203	ENST00000429738	DEFA4	P12838	97 aa		13.38	□□□□□ -0.27
MRPL28-203	ENST00000429738	F2R	P25116	425 aa		13.38	□□□□□ -0.27
MRPL28-203	ENST00000429738	ARL3	P36405	182 aa		13.38	□□□□□ -0.27
MRPL28-203	ENST00000429738	CLEC19A	Q6UXS0	136 aa		13.38	□□□□□ -0.27
MRPL28-203	ENST00000429738	CADM3	Q8N126	398 aa		13.38	□□□□□ -0.27
MRPL28-203	ENST00000429738	OR5H2	Q8NGV7	314 aa		13.38	□□□□□ -0.27
MRPL28-203	ENST00000429738	COMMD5	Q9GZQ3	224 aa		13.38	□□□□□ -0.27
MRPL28-203	ENST00000429738		S4R3C0	116 aa		13.38	□□□□□ -0.27
MRPL28-203	ENST00000429738	TRBV7-1	A0A0A6YYK4	115 aa		13.37	□□□□□ -0.27
MRPL28-203	ENST00000429738	MFSD2B	A6NFX1	497 aa		13.37	□□□□□ -0.27
MRPL28-203	ENST00000429738	MARCH11	A6NNE9	402 aa		13.37	□□□□□ -0.27
MRPL28-203	ENST00000429738		A8MWP6	167 aa		13.37	□□□□□ -0.27
MRPL28-203	ENST00000429738	APOA1	P02647	267 aa		13.37	□□□□□ -0.27
MRPL28-203	ENST00000429738	RLN1	P04808	185 aa		13.37	□□□□□ -0.27
MRPL28-203	ENST00000429738	FOLR2	P14207	255 aa		13.37	□□□□□ -0.27
MRPL28-203	ENST00000429738	HAGH	Q16775	308 aa		13.37	□□□□□ -0.27
MRPL28-203	ENST00000429738	THOC7	Q6I9Y2	204 aa	Known RBP	13.37	□□□□□ -0.27
MRPL28-203	ENST00000429738	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.37	□□□□□ -0.27
MRPL28-203	ENST00000429738	DMBX1	Q8NFW5	382 aa		13.37	□□□□□ -0.27
MRPL28-203	ENST00000429738	CXorf58	Q96LI9	332 aa		13.37	□□□□□ -0.27
MRPL28-203	ENST00000429738	SPATA25	Q9BR10	227 aa		13.37	□□□□□ -0.27
MRPL28-203	ENST00000429738	QTRT1	Q9BXR0	403 aa	Known RBP	13.37	□□□□□ -0.27
MRPL28-203	ENST00000429738	TMEM213	A2RRL7	107 aa		13.36	□□□□□ -0.27
MRPL28-203	ENST00000429738	JTB	O76095	146 aa		13.36	□□□□□ -0.27
MRPL28-203	ENST00000429738	HRH1	P35367	487 aa		13.36	□□□□□ -0.27
MRPL28-203	ENST00000429738	VBP1	P61758	197 aa		13.36	□□□□□ -0.27
MRPL28-203	ENST00000429738	ZNF585B	Q52M93	769 aa		13.36	□□□□□ -0.27
MRPL28-203	ENST00000429738	OR6F1	Q8NGZ6	308 aa		13.36	□□□□□ -0.27
MRPL28-203	ENST00000429738	DYNLRB2	Q8TF09	96 aa		13.36	□□□□□ -0.27
MRPL28-203	ENST00000429738	FCAMR	Q8WWV6	532 aa		13.36	□□□□□ -0.27
MRPL28-203	ENST00000429738	DGCR14	Q96DF8	476 aa	Known RBP	13.36	□□□□□ -0.27
MRPL28-203	ENST00000429738	SCPEP1	Q9HB40	452 aa		13.36	□□□□□ -0.27
MRPL28-203	ENST00000429738	TECR	Q9NZ01	308 aa	Known RBP	13.36	□□□□□ -0.27
MRPL28-203	ENST00000429738	COMMD3	Q9UBI1	195 aa		13.36	□□□□□ -0.27
MRPL28-203	ENST00000429738	TEX50	A0A1B0GTY4	177 aa		13.35	□□□□□ -0.27
MRPL28-203	ENST00000429738	GPR31	O00270	319 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms