RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 RAB13P51153 203 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 RBMS3Q6XE24 437 aaKnown RBP13.24□□□□□ -0.29
MBD4-203ENST00000429544 SLC24A4Q8NFF2 622 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 P2RX4Q99571 388 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 GGACTQ9BVM4 153 aa13.24□□□□□ -0.29
MBD4-203ENST00000429544 LYNX1G3V0Z9 82 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 APOA2P02652 100 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 OPN1MWP04001 364 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 OPN1MW2P0DN77 364 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 OPN1MW3P0DN78 364 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 LYNX1P0DP58 116 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 CDSNQ15517 529 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 GCSAMLQ5JQS6 135 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 SLC35E3Q7Z769 313 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 KAAG1Q9UBP8 84 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 SPTBN4Q9H254 2564 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 CYB5BO43169 146 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 CA2P00918 260 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 SAA1P0DJI8 122 aaPredicted RBP13.23□□□□□ -0.29
MBD4-203ENST00000429544 CDC34P49427 236 aaPredicted RBP13.23□□□□□ -0.29
MBD4-203ENST00000429544 ADORA2A-AS1P86434 159 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 PMS2P11Q13670 270 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 OR10X1Q8NGY0 326 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 GATAD1Q8WUU5 269 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 MGST2Q99735 147 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 TNCP24821 2201 aa13.23□□□□□ -0.29
MBD4-203ENST00000429544 MPDU1O75352 247 aa13.22□□□□□ -0.29
MBD4-203ENST00000429544 IL6RP08887 468 aaPredicted RBP13.22□□□□□ -0.29
MBD4-203ENST00000429544 MUC15Q8N387 334 aa13.22□□□□□ -0.29
MBD4-203ENST00000429544 H0YJW9 148 aa13.22□□□□□ -0.29
MBD4-203ENST00000429544 J3QR06 171 aa13.22□□□□□ -0.29
MBD4-203ENST00000429544 PSMB3P49720 205 aa13.22□□□□□ -0.29
MBD4-203ENST00000429544 DLX6P56179 175 aa13.22□□□□□ -0.29
MBD4-203ENST00000429544 CD81P60033 236 aa13.22□□□□□ -0.29
MBD4-203ENST00000429544 MEF2BQ02080 365 aaPredicted RBP13.22□□□□□ -0.29
MBD4-203ENST00000429544 HABP2Q14520 560 aaPredicted RBP13.22□□□□□ -0.29
MBD4-203ENST00000429544 HARBI1Q96MB7 349 aa13.22□□□□□ -0.29
MBD4-203ENST00000429544 PLEKHA3Q9HB20 300 aa13.22□□□□□ -0.29
MBD4-203ENST00000429544 KBTBD11O94819 623 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 RAB5AP20339 215 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 DIAPH2-AS1Q14236 149 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 TMEM155Q4W5P6 130 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 ARSJQ5FYB0 599 aaPredicted RBP13.21□□□□□ -0.29
MBD4-203ENST00000429544 GGTLC1Q9BX51 225 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 ATRXP46100 2492 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 A0A087WWC5 75 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 C1orf196B1AJZ1 125 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 TSPAN9O75954 239 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 YIF1AO95070 293 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 OPRK1P41145 380 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 RAB5BP61020 215 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 PRCDQ00LT1 54 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 RNF212Q495C1 297 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 MIC13Q5XKP0 118 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 PATZ1Q9HBE1 687 aaKnown RBP13.21□□□□□ -0.29
MBD4-203ENST00000429544 MANBALQ9NQG1 85 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 BET1LQ9NYM9 111 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 ZNF257Q9Y2Q1 563 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 PXMP4Q9Y6I8 212 aa13.21□□□□□ -0.29
MBD4-203ENST00000429544 NDUFA2O43678 99 aa13.2□□□□□ -0.3
MBD4-203ENST00000429544 COL8A2P25067 703 aa13.2□□□□□ -0.3
MBD4-203ENST00000429544 ZNF672Q499Z4 452 aaPredicted RBP13.2□□□□□ -0.3
MBD4-203ENST00000429544 OSR1Q8TAX0 266 aaPredicted RBP13.2□□□□□ -0.3
MBD4-203ENST00000429544 C1orf159Q96HA4 380 aa13.2□□□□□ -0.3
MBD4-203ENST00000429544 YPEL4Q96NS1 127 aa13.2□□□□□ -0.3
MBD4-203ENST00000429544 ANKHD1Q8IWZ3 2542 aaKnown RBP13.2□□□□□ -0.3
MBD4-203ENST00000429544 TEX50A0A1B0GTY4 177 aa13.2□□□□□ -0.3
MBD4-203ENST00000429544 SEC14L6B5MCN3 397 aa13.2□□□□□ -0.3
MBD4-203ENST00000429544 OR5AN1Q8NGI8 311 aa13.2□□□□□ -0.3
MBD4-203ENST00000429544 NPVFQ9HCQ7 196 aa13.2□□□□□ -0.3
MBD4-203ENST00000429544 LINC00311Q8N616 119 aa13.19□□□□□ -0.3
MBD4-203ENST00000429544 SSMEM1Q8WWF3 244 aa13.19□□□□□ -0.3
MBD4-203ENST00000429544 NABP2Q9BQ15 211 aa13.19□□□□□ -0.3
MBD4-203ENST00000429544 BIN3Q9NQY0 253 aa13.19□□□□□ -0.3
MBD4-203ENST00000429544 A0A1W2PPV4 95 aa13.19□□□□□ -0.3
MBD4-203ENST00000429544 PAGE4O60829 102 aa13.19□□□□□ -0.3
MBD4-203ENST00000429544 IGHV1-8P0DP01 117 aa13.19□□□□□ -0.3
MBD4-203ENST00000429544 ZNF674Q2M3X9 581 aa13.19□□□□□ -0.3
MBD4-203ENST00000429544 TMEM177Q53S58 311 aa13.19□□□□□ -0.3
MBD4-203ENST00000429544 WDR25Q64LD2 544 aaPredicted RBP13.19□□□□□ -0.3
MBD4-203ENST00000429544 ZNF343Q6P1L6 599 aa13.19□□□□□ -0.3
MBD4-203ENST00000429544 ZNF596Q8TC21 504 aa13.19□□□□□ -0.3
MBD4-203ENST00000429544 LSM4Q9Y4Z0 139 aaKnown RBP13.19□□□□□ -0.3
MBD4-203ENST00000429544 ZZEF1O43149 2961 aa13.18□□□□□ -0.3
MBD4-203ENST00000429544 NBASA2RRP1 2371 aa13.18□□□□□ -0.3
MBD4-203ENST00000429544 C8orf31Q8N9H6 132 aa13.18□□□□□ -0.3
MBD4-203ENST00000429544 OR4F5Q8NH21 305 aa13.18□□□□□ -0.3
MBD4-203ENST00000429544 TMEM186Q96B77 213 aa13.18□□□□□ -0.3
MBD4-203ENST00000429544 RPUSD4Q96CM3 377 aaKnown RBP13.18□□□□□ -0.3
MBD4-203ENST00000429544 FLYWCH2Q96CP2 140 aaKnown RBP13.18□□□□□ -0.3
MBD4-203ENST00000429544 OR4F4Q96R69 305 aa13.18□□□□□ -0.3
MBD4-203ENST00000429544 SMIM7Q9BQ49 75 aa13.18□□□□□ -0.3
MBD4-203ENST00000429544 SDF2L1Q9HCN8 221 aa13.18□□□□□ -0.3
MBD4-203ENST00000429544 FKBP11Q9NYL4 201 aa13.18□□□□□ -0.3
MBD4-203ENST00000429544 SOX15O60248 233 aa13.18□□□□□ -0.3
MBD4-203ENST00000429544 PNRC1Q12796 327 aaPredicted RBP13.18□□□□□ -0.3
MBD4-203ENST00000429544 FAM71F2Q6NXP2 309 aa13.18□□□□□ -0.3
MBD4-203ENST00000429544 TEPPQ6URK8 271 aa13.18□□□□□ -0.3
MBD4-203ENST00000429544 OR9G1Q8NH87 305 aa13.18□□□□□ -0.3
MBD4-203ENST00000429544 ST6GALNAC6Q969X2 333 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms