RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 LEAP2Q969E1 77 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 NEU1Q99519 415 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 RARRES2Q99969 163 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 C2orf88Q9BSF0 95 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 HAX1O00165 279 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 MDKP21741 143 aaPredicted RBP10.83□□□□□ -0.68
LDB3-205ENST00000429277 ZIC4Q8N9L1 334 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 JMJD8Q96S16 334 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 PEMTQ9UBM1 199 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 SCN4AP35499 1836 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 H3BRM9 83 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 H7C2G1 150 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 CRYBA2P53672 197 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 SUMO2P61956 95 aaKnown RBP10.83□□□□□ -0.68
LDB3-205ENST00000429277 FAM74A4Q5TZK3 123 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 PPP1R27Q86WC6 154 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 TEX45Q8NA69 505 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 ZNRF1Q8ND25 227 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 NEUROG1Q92886 237 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 REPIN1Q9BWE0 567 aaKnown RBP10.83□□□□□ -0.68
LDB3-205ENST00000429277 FBXL7Q9UJT9 491 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 ZFC3H1O60293 1989 aaKnown RBP10.83□□□□□ -0.68
LDB3-205ENST00000429277 IGHV2OR16-5A0A0B4J2B6 119 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 TCF21O43680 179 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 MOSP00540 346 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 MYOD1P15172 320 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 ZNF385CQ66K41 422 aaPredicted RBP10.83□□□□□ -0.68
LDB3-205ENST00000429277 SGK494Q96LW2 274 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 ATG2BQ96BY7 2078 aa10.83□□□□□ -0.68
LDB3-205ENST00000429277 TRIP12Q14669 1992 aaPredicted RBP10.82□□□□□ -0.68
LDB3-205ENST00000429277 CABIN1Q9Y6J0 2220 aa10.82□□□□□ -0.68
LDB3-205ENST00000429277 TGIF2-C20orf24A0A0A6YYL0 155 aa10.82□□□□□ -0.68
LDB3-205ENST00000429277 ICAM4Q14773 271 aa10.82□□□□□ -0.68
LDB3-205ENST00000429277 LRTM2Q8N967 370 aa10.82□□□□□ -0.68
LDB3-205ENST00000429277 FAM168AQ92567 244 aa10.82□□□□□ -0.68
LDB3-205ENST00000429277 ARPC1AQ92747 370 aa10.82□□□□□ -0.68
LDB3-205ENST00000429277 STRCP1A6NGW2 1772 aa10.82□□□□□ -0.68
LDB3-205ENST00000429277 LINC01560Q8TB33 94 aa10.82□□□□□ -0.68
LDB3-205ENST00000429277 COL5A3P25940 1745 aaPredicted RBP10.82□□□□□ -0.68
LDB3-205ENST00000429277 TIAF1O95411 115 aa10.82□□□□□ -0.68
LDB3-205ENST00000429277 STAG3L3P0CL85 134 aa10.82□□□□□ -0.68
LDB3-205ENST00000429277 ATP1A1-AS1Q5TC04 95 aa10.82□□□□□ -0.68
LDB3-205ENST00000429277 ZNF414Q96IQ9 312 aa10.82□□□□□ -0.68
LDB3-205ENST00000429277 PLAURQ03405 335 aa10.82□□□□□ -0.68
LDB3-205ENST00000429277 ZNF418Q8TF45 676 aaPredicted RBP10.82□□□□□ -0.68
LDB3-205ENST00000429277 GTF3AQ92664 365 aaKnown RBP10.82□□□□□ -0.68
LDB3-205ENST00000429277 RCC1LQ96I51 464 aaKnown RBP10.82□□□□□ -0.68
LDB3-205ENST00000429277 C7orf71A4D174 169 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 IMMP1LQ96LU5 166 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 SIGLEC12Q96PQ1 595 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 TUBA4BQ9H853 241 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 IGLV3-12A0A075B6K2 115 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 IL36BQ9NZH7 164 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 SOD3P08294 240 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 CSRP1P21291 193 aaKnown RBP10.81□□□□□ -0.68
LDB3-205ENST00000429277 RPL39P5Q59GN2 51 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 VKORC1L1Q8N0U8 176 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 RNASE6Q93091 150 aaKnown RBP10.81□□□□□ -0.68
LDB3-205ENST00000429277 A0A1B0GUT8 65 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 C17orf100A8MU93 164 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 PEX7O00628 323 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 RRHO14718 337 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 CD69Q07108 199 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 SEMA5BQ9P283 1151 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 MYO16Q9Y6X6 1858 aa10.81□□□□□ -0.68
LDB3-205ENST00000429277 A1L4Q6 167 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 RFPL3SP0C7P2 107 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 SLC50A1Q9BRV3 221 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 RPRMQ9NS64 109 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 FBLN5Q9UBX5 448 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 ZIC3O60481 467 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 DDTP30046 118 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 TBR1Q16650 682 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 MRPL14Q6P1L8 145 aaKnown RBP10.8□□□□□ -0.68
LDB3-205ENST00000429277 LINC00114Q6XXX2 140 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 FBXL15Q9H469 300 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 IGKV1D-33P01593 117 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 IGKV1-33P01594 117 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 FAM27E3Q08E93 113 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 OR52E5Q8NH55 327 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 DPH3Q96FX2 82 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 KCNS1Q96KK3 526 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 CCDC88CQ9P219 2028 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 SPTA1P02549 2419 aa10.8□□□□□ -0.68
LDB3-205ENST00000429277 TRAV24A0A0B4J272 114 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 CTSBP07858 339 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 LINC00271P0C7V0 271 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 BSPH1Q075Z2 132 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 PEAR1Q5VY43 1037 aaPredicted RBP10.79□□□□□ -0.68
LDB3-205ENST00000429277 PVRIGQ6DKI7 326 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 NPFFR1Q9GZQ6 430 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 LOC102723996A0A087X1L8 192 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 TTC9CQ8N5M4 171 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 MRPL13Q9BYD1 178 aaKnown RBP10.79□□□□□ -0.68
LDB3-205ENST00000429277 SDF2L1Q9HCN8 221 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 RP1P56715 2156 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 TNS1Q9HBL0 1735 aaKnown RBP10.79□□□□□ -0.68
LDB3-205ENST00000429277 ADAMTSL1Q8N6G6 1762 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 YPEL1O60688 119 aa10.79□□□□□ -0.68
LDB3-205ENST00000429277 YPEL2Q96QA6 119 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms