RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 CCDC140Q96MF4 163 aa13.97□□□□□ -0.17
PSPC1-202ENST00000427943 AIFM2Q9BRQ8 373 aa13.97□□□□□ -0.17
PSPC1-202ENST00000427943 TMEM140Q9NV12 185 aa13.97□□□□□ -0.17
PSPC1-202ENST00000427943 UPK2O00526 184 aa13.96□□□□□ -0.17
PSPC1-202ENST00000427943 NAT1P18440 290 aa13.96□□□□□ -0.17
PSPC1-202ENST00000427943 HLA-DMAP28067 261 aa13.96□□□□□ -0.17
PSPC1-202ENST00000427943 HRH1P35367 487 aa13.96□□□□□ -0.17
PSPC1-202ENST00000427943 OR2B8PP59922 312 aa13.96□□□□□ -0.17
PSPC1-202ENST00000427943 POU2AF1Q16633 256 aa13.96□□□□□ -0.17
PSPC1-202ENST00000427943 DHRS11Q6UWP2 260 aa13.96□□□□□ -0.17
PSPC1-202ENST00000427943 CLEC19AQ6UXS0 136 aa13.96□□□□□ -0.17
PSPC1-202ENST00000427943 ADAMTSL5Q6ZMM2 481 aa13.96□□□□□ -0.17
PSPC1-202ENST00000427943 Q8N402 240 aa13.96□□□□□ -0.17
PSPC1-202ENST00000427943 BORCS5Q969J3 196 aa13.96□□□□□ -0.17
PSPC1-202ENST00000427943 THAP7Q9BT49 309 aaPredicted RBP13.96□□□□□ -0.17
PSPC1-202ENST00000427943 ZMAT4Q9H898 229 aa13.96□□□□□ -0.17
PSPC1-202ENST00000427943 C19orf73Q9NVV2 129 aa13.96□□□□□ -0.17
PSPC1-202ENST00000427943 COMMD9Q9P000 198 aa13.96□□□□□ -0.17
PSPC1-202ENST00000427943 HUWE1Q7Z6Z7 4374 aaKnown RBP13.95□□□□□ -0.18
PSPC1-202ENST00000427943 GGCTO75223 188 aaKnown RBP13.95□□□□□ -0.18
PSPC1-202ENST00000427943 OR2C1O95371 312 aa13.95□□□□□ -0.18
PSPC1-202ENST00000427943 DHFRP00374 187 aa13.95□□□□□ -0.18
PSPC1-202ENST00000427943 DEFA4P12838 97 aa13.95□□□□□ -0.18
PSPC1-202ENST00000427943 ARL3P36405 182 aa13.95□□□□□ -0.18
PSPC1-202ENST00000427943 GTSCR1Q86UQ5 136 aa13.95□□□□□ -0.18
PSPC1-202ENST00000427943 SNX29P2Q8IUI4 249 aa13.95□□□□□ -0.18
PSPC1-202ENST00000427943 CD300LFQ8TDQ1 290 aa13.95□□□□□ -0.18
PSPC1-202ENST00000427943 DYNLRB2Q8TF09 96 aa13.95□□□□□ -0.18
PSPC1-202ENST00000427943 EEF1AKMT3Q96AZ1 226 aa13.95□□□□□ -0.18
PSPC1-202ENST00000427943 COMMD5Q9GZQ3 224 aa13.95□□□□□ -0.18
PSPC1-202ENST00000427943 PLEKHA2Q9HB19 425 aa13.95□□□□□ -0.18
PSPC1-202ENST00000427943 IGLV11-55A0A075B6I3 123 aa13.94□□□□□ -0.18
PSPC1-202ENST00000427943 IGLC7A0M8Q6 106 aa13.94□□□□□ -0.18
PSPC1-202ENST00000427943 MFSD2BA6NFX1 497 aa13.94□□□□□ -0.18
PSPC1-202ENST00000427943 HPGDSO60760 199 aa13.94□□□□□ -0.18
PSPC1-202ENST00000427943 PGLYRP1O75594 196 aaPredicted RBP13.94□□□□□ -0.18
PSPC1-202ENST00000427943 HIST1H1BP16401 226 aaKnown RBP13.94□□□□□ -0.18
PSPC1-202ENST00000427943 CD300EQ496F6 205 aaPredicted RBP13.94□□□□□ -0.18
PSPC1-202ENST00000427943 FAM209BQ5JX69 171 aa13.94□□□□□ -0.18
PSPC1-202ENST00000427943 LYSMD2Q8IV50 215 aa13.94□□□□□ -0.18
PSPC1-202ENST00000427943 GPX8Q8TED1 209 aa13.94□□□□□ -0.18
PSPC1-202ENST00000427943 NAA50Q9GZZ1 169 aaKnown RBP13.94□□□□□ -0.18
PSPC1-202ENST00000427943 SELENOKQ9Y6D0 94 aa13.94□□□□□ -0.18
PSPC1-202ENST00000427943 C2orf70A6NJV1 201 aa13.93□□□□□ -0.18
PSPC1-202ENST00000427943 MARCH11A6NNE9 402 aa13.93□□□□□ -0.18
PSPC1-202ENST00000427943 A8MZ25 164 aa13.93□□□□□ -0.18
PSPC1-202ENST00000427943 APOA1P02647 267 aa13.93□□□□□ -0.18
PSPC1-202ENST00000427943 SMIM18P0DKX4 95 aa13.93□□□□□ -0.18
PSPC1-202ENST00000427943 ELK1P19419 428 aa13.93□□□□□ -0.18
PSPC1-202ENST00000427943 F2RP25116 425 aa13.93□□□□□ -0.18
PSPC1-202ENST00000427943 MECP2P51608 486 aaKnown RBP13.93□□□□□ -0.18
PSPC1-202ENST00000427943 ERVK-16P61578 105 aa13.93□□□□□ -0.18
PSPC1-202ENST00000427943 OR10W1Q8NGF6 305 aa13.93□□□□□ -0.18
PSPC1-202ENST00000427943 OR2K2Q8NGT1 345 aa13.93□□□□□ -0.18
PSPC1-202ENST00000427943 OR6F1Q8NGZ6 308 aa13.93□□□□□ -0.18
PSPC1-202ENST00000427943 CACNG8Q8WXS5 425 aa13.93□□□□□ -0.18
PSPC1-202ENST00000427943 TM2D3Q9BRN9 247 aa13.93□□□□□ -0.18
PSPC1-202ENST00000427943 ZC4H2Q9NQZ6 224 aa13.93□□□□□ -0.18
PSPC1-202ENST00000427943 SMIM31A0A1B0GVY4 71 aa13.92□□□□□ -0.18
PSPC1-202ENST00000427943 GPR31O00270 319 aa13.92□□□□□ -0.18
PSPC1-202ENST00000427943 LPAR6P43657 344 aa13.92□□□□□ -0.18
PSPC1-202ENST00000427943 KLK9Q2XQG4 91 aa13.92□□□□□ -0.18
PSPC1-202ENST00000427943 PHLDA2Q53GA4 152 aa13.92□□□□□ -0.18
PSPC1-202ENST00000427943 RNASE12Q5GAN4 147 aaKnown RBP13.92□□□□□ -0.18
PSPC1-202ENST00000427943 FCAMRQ8WWV6 532 aa13.92□□□□□ -0.18
PSPC1-202ENST00000427943 QTRT1Q9BXR0 403 aaKnown RBP13.92□□□□□ -0.18
PSPC1-202ENST00000427943 KLK9Q9UKQ9 250 aa13.92□□□□□ -0.18
PSPC1-202ENST00000427943 NSG2Q9Y328 171 aa13.92□□□□□ -0.18
PSPC1-202ENST00000427943 KRASP01116 189 aa13.91□□□□□ -0.18
PSPC1-202ENST00000427943 FOLR2P14207 255 aa13.91□□□□□ -0.18
PSPC1-202ENST00000427943 G6PCP35575 357 aa13.91□□□□□ -0.18
PSPC1-202ENST00000427943 CD81P60033 236 aa13.91□□□□□ -0.18
PSPC1-202ENST00000427943 TSPAN5P62079 268 aa13.91□□□□□ -0.18
PSPC1-202ENST00000427943 ZNF585BQ52M93 769 aa13.91□□□□□ -0.18
PSPC1-202ENST00000427943 CMTM1Q8IZ96 169 aa13.91□□□□□ -0.18
PSPC1-202ENST00000427943 MUC7Q8TAX7 377 aa13.91□□□□□ -0.18
PSPC1-202ENST00000427943 DGCR14Q96DF8 476 aaKnown RBP13.91□□□□□ -0.18
PSPC1-202ENST00000427943 CMTM3Q96MX0 182 aa13.91□□□□□ -0.18
PSPC1-202ENST00000427943 HINT2Q9BX68 163 aa13.91□□□□□ -0.18
PSPC1-202ENST00000427943 TUBA4BQ9H853 241 aa13.91□□□□□ -0.18
PSPC1-202ENST00000427943 PLEKHA3Q9HB20 300 aa13.91□□□□□ -0.18
PSPC1-202ENST00000427943 TRBV7-1A0A0A6YYK4 115 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 TEX50A0A1B0GTY4 177 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 ZNF320A2RRD8 509 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 FAM25AB3EWG3 89 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 FAM25CB3EWG5 89 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 FAM25GB3EWG6 89 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 C3orf84H3BNL1 204 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 LGALS9O00182 355 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 TRAPPC2P0DI81 140 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 TRAPPC2BP0DI82 140 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 GPR183P32249 361 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 RCVRNP35243 200 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 RORCP51449 518 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 DEFB114Q30KQ6 69 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 GPHB5Q86YW7 130 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 CXorf58Q96LI9 332 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 SRSF8Q9BRL6 282 aaKnown RBP13.9□□□□□ -0.18
PSPC1-202ENST00000427943 SCPEP1Q9HB40 452 aa13.9□□□□□ -0.18
PSPC1-202ENST00000427943 DNAH7Q8WXX0 4024 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms