RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 CA2P00918 260 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 OPN1MWP04001 364 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 CRYBA1P05813 215 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 OPN1MW2P0DN77 364 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 OPN1MW3P0DN78 364 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 PRCDQ00LT1 54 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 FAM90A2PQ658T7 463 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 FAM71F2Q6NXP2 309 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 RBMS3Q6XE24 437 aaKnown RBP11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 C8orf31Q8N9H6 132 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 OSR1Q8TAX0 266 aaPredicted RBP11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 ZNF596Q8TC21 504 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 RAB24Q969Q5 203 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 HIST1H2BAQ96A08 127 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 TMEM186Q96B77 213 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 TVP23CQ96ET8 276 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 HARBI1Q96MB7 349 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 P2RX4Q99571 388 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 TUBA4BQ9H853 241 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 BET1LQ9NYM9 111 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 ZNF257Q9Y2Q1 563 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 KALRNO60229 2985 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 ADGRG4Q8IZF6 3080 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 SMG1Q96Q15 3661 aaKnown RBP11.4□□□□□ -0.59
APOBEC3D-202ENST00000427494 TRBV23-1A0A0A0MS06 115 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 KBTBD11O94819 623 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 IGHV1-8P0DP01 117 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 DEFA4P12838 97 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 CDC34P49427 236 aaPredicted RBP11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 PPOXP50336 477 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 LY6DQ14210 128 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 DIAPH2-AS1Q14236 149 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 IQCF2Q8IXL9 164 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 OR5AN1Q8NGI8 311 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 MGST2Q99735 147 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 FKBP11Q9NYL4 201 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 TEX50A0A1B0GTY4 177 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 TAGLN2P37802 199 aaKnown RBP11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 OPRK1P41145 380 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 PMS2P11Q13670 270 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 GCSAMLQ5JQS6 135 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 OR9G1Q8NH87 305 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 FLYWCH2Q96CP2 140 aaKnown RBP11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 NABP2Q9BQ15 211 aa11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 RALYQ9UKM9 306 aaKnown RBP11.39□□□□□ -0.59
APOBEC3D-202ENST00000427494 A0A087X0M5 115 aa11.38□□□□□ -0.59
APOBEC3D-202ENST00000427494 A0A1B0GX30 115 aa11.38□□□□□ -0.59
APOBEC3D-202ENST00000427494 IGHV2-70P01814 119 aa11.38□□□□□ -0.59
APOBEC3D-202ENST00000427494 TMEM177Q53S58 311 aa11.38□□□□□ -0.59
APOBEC3D-202ENST00000427494 ARSJQ5FYB0 599 aaPredicted RBP11.38□□□□□ -0.59
APOBEC3D-202ENST00000427494 SLC35E3Q7Z769 313 aa11.38□□□□□ -0.59
APOBEC3D-202ENST00000427494 TMEM204Q9BSN7 226 aa11.38□□□□□ -0.59
APOBEC3D-202ENST00000427494 GGTLC1Q9BX51 225 aa11.38□□□□□ -0.59
APOBEC3D-202ENST00000427494 SOX15O60248 233 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 OR2C1O95371 312 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 MT-ND4LP03901 98 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 PSMB3P49720 205 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 MIC13Q5XKP0 118 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 PDPNQ86YL7 162 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 OR4C13Q8NGP0 309 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 GATAD1Q8WUU5 269 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 ST6GALNAC6Q969X2 333 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 TMEM133Q9H2Q1 129 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 NPVFQ9HCQ7 196 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 MANBALQ9NQG1 85 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 PXMP4Q9Y6I8 212 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 SEC14L6B5MCN3 397 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 YIF1AO95070 293 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 FOLR2P14207 255 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 IL3RAP26951 378 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 CD81P60033 236 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 MEF2BQ02080 365 aaPredicted RBP11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 ZNF841Q6ZN19 808 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 TGIF2LXQ8IUE1 241 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 C11orf42Q8N5U0 333 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 OR5B3Q8NH48 314 aa11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 PATZ1Q9HBE1 687 aaKnown RBP11.37□□□□□ -0.59
APOBEC3D-202ENST00000427494 SPTBN4Q9H254 2564 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 A0A1W2PPV4 95 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 ZNF727A8MUV8 499 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 CTRB1P17538 263 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 ZNF137PP52743 207 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 CTRB2Q6GPI1 263 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 ZFP82Q8N141 532 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 FAM24BQ8N5W8 94 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 SSMEM1Q8WWF3 244 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 NEIL1Q96FI4 390 aaPredicted RBP11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 PRORYQ9H606 182 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 KCNIP2Q9NS61 270 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 WASHC3Q9Y3C0 194 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 LSM4Q9Y4Z0 139 aaKnown RBP11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 SPTA1P02549 2419 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 A0A087WWC5 75 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 FSTL3O95633 263 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 RAB13P51153 203 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 RPL8P62917 257 aaKnown RBP11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 TEPPQ6URK8 271 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 C1orf159Q96HA4 380 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 PCGF1Q9BSM1 259 aa11.36□□□□□ -0.59
APOBEC3D-202ENST00000427494 COMMD5Q9GZQ3 224 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms