RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 RAB5AP20339 215 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 RAB5BP61020 215 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 HABP2Q14520 560 aaPredicted RBP11.28□□□□□ -0.6
CDCA3-202ENST00000422785 FBXL19-AS1Q494R0 122 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 TREML4Q6UXN2 200 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 RAB24Q969Q5 203 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 YPEL4Q96NS1 127 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 BIN3Q9NQY0 253 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 ZNRD1Q9P1U0 126 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 KAAG1Q9UBP8 84 aa11.28□□□□□ -0.6
CDCA3-202ENST00000422785 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.27□□□□□ -0.61
CDCA3-202ENST00000422785 HMGB3O15347 200 aaKnown RBP11.27□□□□□ -0.61
CDCA3-202ENST00000422785 PLA2G5P39877 138 aa11.27□□□□□ -0.61
CDCA3-202ENST00000422785 MEF2BQ02080 365 aaPredicted RBP11.27□□□□□ -0.61
CDCA3-202ENST00000422785 RBM14Q96PK6 669 aaKnown RBP11.27□□□□□ -0.61
CDCA3-202ENST00000422785 ENY2Q9NPA8 101 aa11.27□□□□□ -0.61
CDCA3-202ENST00000422785 OR51B2Q9Y5P1 312 aa11.27□□□□□ -0.61
CDCA3-202ENST00000422785 SMCO3A2RU48 225 aa11.27□□□□□ -0.61
CDCA3-202ENST00000422785 C1orf196B1AJZ1 125 aa11.27□□□□□ -0.61
CDCA3-202ENST00000422785 B4DEV8 164 aa11.27□□□□□ -0.61
CDCA3-202ENST00000422785 IGKV1-16P04430 117 aa11.27□□□□□ -0.61
CDCA3-202ENST00000422785 IFNA4P05014 189 aa11.27□□□□□ -0.61
CDCA3-202ENST00000422785 PNRC1Q12796 327 aaPredicted RBP11.27□□□□□ -0.61
CDCA3-202ENST00000422785 H1FXQ92522 213 aaKnown RBP11.27□□□□□ -0.61
CDCA3-202ENST00000422785 TMPRSS5Q9H3S3 457 aa11.27□□□□□ -0.61
CDCA3-202ENST00000422785 NIT2Q9NQR4 276 aa11.27□□□□□ -0.61
CDCA3-202ENST00000422785 ZNF257Q9Y2Q1 563 aa11.27□□□□□ -0.61
CDCA3-202ENST00000422785 SEC14L6B5MCN3 397 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 UPK2O00526 184 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 DVL1O14640 695 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 OPRK1P41145 380 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 PSMB3P49720 205 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 CD81P60033 236 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 SLC24A4Q8NFF2 622 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 MALSU1Q96EH3 234 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 MANBALQ9NQG1 85 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 SIRT7Q9NRC8 400 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 CTSZQ9UBR2 303 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 POLEQ07864 2286 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 IGHV1-69-2A0A0G2JMI3 117 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 CXorf65A6NEN9 183 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 SRRM4A7MD48 611 aaKnown RBP11.26□□□□□ -0.61
CDCA3-202ENST00000422785 AGAP20933 346 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 NPY1RP25929 384 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 KLRB1Q12918 225 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 C8orf31Q8N9H6 132 aa11.26□□□□□ -0.61
CDCA3-202ENST00000422785 PKDREJQ9NTG1 2253 aa11.25□□□□□ -0.61
CDCA3-202ENST00000422785 hCG_1809904A0A1W2PP81 198 aa11.25□□□□□ -0.61
CDCA3-202ENST00000422785 A0A1W2PR64 198 aa11.25□□□□□ -0.61
CDCA3-202ENST00000422785 A0A1W2PRV1 198 aa11.25□□□□□ -0.61
CDCA3-202ENST00000422785 LOXP28300 417 aaPredicted RBP11.25□□□□□ -0.61
CDCA3-202ENST00000422785 CHRNB4P30926 498 aa11.25□□□□□ -0.61
CDCA3-202ENST00000422785 CDC34P49427 236 aaPredicted RBP11.25□□□□□ -0.61
CDCA3-202ENST00000422785 ST6GALNAC3Q8NDV1 305 aa11.25□□□□□ -0.61
CDCA3-202ENST00000422785 OSR1Q8TAX0 266 aaPredicted RBP11.25□□□□□ -0.61
CDCA3-202ENST00000422785 NPVFQ9HCQ7 196 aa11.25□□□□□ -0.61
CDCA3-202ENST00000422785 ZNF727A8MUV8 499 aa11.25□□□□□ -0.61
CDCA3-202ENST00000422785 TMEM249Q2WGJ8 235 aa11.25□□□□□ -0.61
CDCA3-202ENST00000422785 WDR25Q64LD2 544 aaPredicted RBP11.25□□□□□ -0.61
CDCA3-202ENST00000422785 LINC00311Q8N616 119 aa11.25□□□□□ -0.61
CDCA3-202ENST00000422785 LINC01560Q8TB33 94 aa11.25□□□□□ -0.61
CDCA3-202ENST00000422785 ZNF596Q8TC21 504 aa11.25□□□□□ -0.61
CDCA3-202ENST00000422785 RAB1CQ92928 201 aa11.25□□□□□ -0.61
CDCA3-202ENST00000422785 MGST2Q99735 147 aa11.25□□□□□ -0.61
CDCA3-202ENST00000422785 MRPL20Q9BYC9 149 aaKnown RBP11.25□□□□□ -0.61
CDCA3-202ENST00000422785 BET1LQ9NYM9 111 aa11.25□□□□□ -0.61
CDCA3-202ENST00000422785 LSM4Q9Y4Z0 139 aaKnown RBP11.25□□□□□ -0.61
CDCA3-202ENST00000422785 FAM90A27PA6NNH2 459 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 TMEM250H0YL14 139 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 J3QR06 171 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 KBTBD11O94819 623 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 CA2P00918 260 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 APOA2P02652 100 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 DLX6P56179 175 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 PRCDQ00LT1 54 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 FAM71F2Q6NXP2 309 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 OR5AN1Q8NGI8 311 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 SDF2L1Q9HCN8 221 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 FKBP11Q9NYL4 201 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 ARFGEF3Q5TH69 2177 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 H0YJW9 148 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 CCL21O00585 134 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 YIF1AO95070 293 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 PLAUP00749 431 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 MYOD1P15172 320 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 CYB5R2Q6BCY4 276 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 GGTLC1Q9BX51 225 aa11.24□□□□□ -0.61
CDCA3-202ENST00000422785 SAA1P0DJI8 122 aaPredicted RBP11.23□□□□□ -0.61
CDCA3-202ENST00000422785 TMEM155Q4W5P6 130 aa11.23□□□□□ -0.61
CDCA3-202ENST00000422785 ARSJQ5FYB0 599 aaPredicted RBP11.23□□□□□ -0.61
CDCA3-202ENST00000422785 GCSAMLQ5JQS6 135 aa11.23□□□□□ -0.61
CDCA3-202ENST00000422785 OR10X1Q8NGY0 326 aa11.23□□□□□ -0.61
CDCA3-202ENST00000422785 HINT2Q9BX68 163 aa11.23□□□□□ -0.61
CDCA3-202ENST00000422785 PLEKHA3Q9HB20 300 aa11.23□□□□□ -0.61
CDCA3-202ENST00000422785 KCNIP2Q9NS61 270 aa11.23□□□□□ -0.61
CDCA3-202ENST00000422785 ADGRG4Q8IZF6 3080 aa11.23□□□□□ -0.61
CDCA3-202ENST00000422785 IGF2RP11717 2491 aa11.23□□□□□ -0.61
CDCA3-202ENST00000422785 A0A087X0M5 115 aa11.23□□□□□ -0.61
CDCA3-202ENST00000422785 A0A1B0GX30 115 aa11.23□□□□□ -0.61
CDCA3-202ENST00000422785 DEFA4P12838 97 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms