RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 ALKBH7Q9BT30 221 aaPredicted RBP13.83□□□□□ -0.2
PKP4-204ENST00000421462 CLCF1Q9UBD9 225 aa13.83□□□□□ -0.2
PKP4-204ENST00000421462 SELENOKQ9Y6D0 94 aa13.83□□□□□ -0.2
PKP4-204ENST00000421462 LOC102723996A0A087X1L8 192 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 HELTA6NFD8 242 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 M0QZ24 198 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 RAB29O14966 203 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 CTRLP40313 264 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 KCNS1Q96KK3 526 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 OBP2BQ9NPH6 170 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 TIMM8BQ9Y5J9 83 aaPredicted RBP13.82□□□□□ -0.2
PKP4-204ENST00000421462 MRPL52Q86TS9 123 aaKnown RBP13.82□□□□□ -0.2
PKP4-204ENST00000421462 FZR1Q9UM11 496 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 V9GYV3 84 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 ABCA1O95477 2261 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 CADP27708 2225 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 TMEM30CPA0ZSE6 113 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 ZNF324O75467 553 aaPredicted RBP13.82□□□□□ -0.2
PKP4-204ENST00000421462 Q0VFX4 171 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 Q0VG73 95 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 EFNB3Q15768 340 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 MIR17HGQ75NE6 70 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 METRNQ9UJH8 293 aa13.82□□□□□ -0.2
PKP4-204ENST00000421462 OR7C2O60412 319 aa13.81□□□□□ -0.2
PKP4-204ENST00000421462 GPR6P46095 362 aaPredicted RBP13.81□□□□□ -0.2
PKP4-204ENST00000421462 CYB561P49447 251 aa13.81□□□□□ -0.2
PKP4-204ENST00000421462 MDP1Q86V88 176 aa13.81□□□□□ -0.2
PKP4-204ENST00000421462 STPG3Q8N7X2 389 aa13.81□□□□□ -0.2
PKP4-204ENST00000421462 HSD17B10Q99714 261 aaKnown RBP13.81□□□□□ -0.2
PKP4-204ENST00000421462 CLEC7AQ9BXN2 247 aa13.81□□□□□ -0.2
PKP4-204ENST00000421462 SLC35D1Q9NTN3 355 aa13.81□□□□□ -0.2
PKP4-204ENST00000421462 AHRRA9YTQ3 701 aa13.81□□□□□ -0.2
PKP4-204ENST00000421462 CA2P00918 260 aa13.81□□□□□ -0.2
PKP4-204ENST00000421462 P0C879 139 aa13.81□□□□□ -0.2
PKP4-204ENST00000421462 TSPOP30536 169 aa13.81□□□□□ -0.2
PKP4-204ENST00000421462 VWC2Q2TAL6 325 aa13.81□□□□□ -0.2
PKP4-204ENST00000421462 STUMQ69YW2 141 aa13.81□□□□□ -0.2
PKP4-204ENST00000421462 ZNF738Q8NE65 137 aa13.81□□□□□ -0.2
PKP4-204ENST00000421462 MBNL3Q9NUK0 354 aaKnown RBP13.81□□□□□ -0.2
PKP4-204ENST00000421462 BET1LQ9NYM9 111 aa13.81□□□□□ -0.2
PKP4-204ENST00000421462 TNRC6AQ8NDV7 1962 aaKnown RBP13.81□□□□□ -0.2
PKP4-204ENST00000421462 DCHS1Q96JQ0 3298 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 ZNF318Q5VUA4 2279 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 MYOD1P15172 320 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 ZNF718Q3SXZ3 478 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 Q6ZR03 302 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 TCTEX1D1Q8N7M0 179 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 OR2Y1Q8NGV0 311 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 PKIBQ9C010 78 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 NKX6-3A6NJ46 265 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 BMPR1BO00238 502 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 ESDP10768 282 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 ANKRD39Q53RE8 183 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 NIT1Q86X76 327 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 OR13A1Q8NGR1 328 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 TSKUQ8WUA8 353 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 PLEKHA3Q9HB20 300 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 GNG12Q9UBI6 72 aa13.8□□□□□ -0.2
PKP4-204ENST00000421462 M0R1X1 148 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 HSBP1O75506 76 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 ARR3P36575 388 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 OPRK1P41145 380 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 TRIP6Q15654 476 aaKnown RBP13.79□□□□□ -0.2
PKP4-204ENST00000421462 RNASEKQ6P5S7 137 aaKnown RBP13.79□□□□□ -0.2
PKP4-204ENST00000421462 TAAR6Q96RI8 345 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 WDR54Q9H977 334 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 POLDIP2Q9Y2S7 368 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 YLPM1P49750 1951 aaKnown RBP13.79□□□□□ -0.2
PKP4-204ENST00000421462 MED13Q9UHV7 2174 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 LY6G6EA0A0G2JKS1 128 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 MAGEA5P43359 124 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 FOXF2Q12947 444 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 UBE2V1Q13404 147 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 RPL39P5Q59GN2 51 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 PRR27Q6MZM9 219 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 ALKBH2Q6NS38 261 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 TMEM136Q6ZRR5 245 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 MOB3BQ86TA1 216 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 ARL6IP6Q8N6S5 226 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 RAB1CQ92928 201 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 LEAP2Q969E1 77 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 VPS25Q9BRG1 176 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 SSBP4Q9BWG4 385 aaPredicted RBP13.79□□□□□ -0.2
PKP4-204ENST00000421462 SFXN3Q9BWM7 321 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 U3KQA8 63 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 H0Y8G0 127 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 IGFBP2P18065 325 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 USF1P22415 310 aaPredicted RBP13.79□□□□□ -0.2
PKP4-204ENST00000421462 GPR12P47775 334 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 CAMPP49913 170 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 PRRX1P54821 245 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 PMCHL1Q16048 86 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 TIGITQ495A1 244 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 KLHDC1Q8N7A1 406 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 LINC00479Q96M42 142 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 GNB1LQ9BYB4 327 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 CDC42EP3Q9UKI2 254 aa13.79□□□□□ -0.2
PKP4-204ENST00000421462 CFIP05156 583 aa13.78□□□□□ -0.2
PKP4-204ENST00000421462 KLF3P57682 345 aaPredicted RBP13.78□□□□□ -0.2
PKP4-204ENST00000421462 RHOBP62745 196 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms