RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 NUDCD2Q8WVJ2 157 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 EEF1AKMT3Q96AZ1 226 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 MGLLQ99685 303 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 BATF3Q9NR55 127 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 PRELID3BQ9Y3B1 194 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 OR2W1Q9Y3N9 320 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 ABCA13Q86UQ4 5058 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 IGLV11-55A0A075B6I3 123 aa6□□□□□ -1.45
VIM-202ENST00000421459 TMEM235A6NFC5 223 aa6□□□□□ -1.45
VIM-202ENST00000421459 A6NHS1 94 aa6□□□□□ -1.45
VIM-202ENST00000421459 A8MWP6 167 aa6□□□□□ -1.45
VIM-202ENST00000421459 ZNF207O43670 478 aaKnown RBP6□□□□□ -1.45
VIM-202ENST00000421459 SSX5O60225 188 aa6□□□□□ -1.45
VIM-202ENST00000421459 DIRAS3O95661 229 aa6□□□□□ -1.45
VIM-202ENST00000421459 C8orf88P0DMB2 117 aa6□□□□□ -1.45
VIM-202ENST00000421459 DEFA4P12838 97 aa6□□□□□ -1.45
VIM-202ENST00000421459 RAB6AP20340 208 aa6□□□□□ -1.45
VIM-202ENST00000421459 FCGR2BP31994 310 aaPredicted RBP6□□□□□ -1.45
VIM-202ENST00000421459 TRAM1Q15629 374 aa6□□□□□ -1.45
VIM-202ENST00000421459 FAM209BQ5JX69 171 aa6□□□□□ -1.45
VIM-202ENST00000421459 RBPMS2Q6ZRY4 209 aaKnown RBP6□□□□□ -1.45
VIM-202ENST00000421459 Q6ZS49 121 aa6□□□□□ -1.45
VIM-202ENST00000421459 OR2C3Q8N628 320 aa6□□□□□ -1.45
VIM-202ENST00000421459 OR10W1Q8NGF6 305 aa6□□□□□ -1.45
VIM-202ENST00000421459 OR1L6Q8NGR2 347 aa6□□□□□ -1.45
VIM-202ENST00000421459 OR5B3Q8NH48 314 aa6□□□□□ -1.45
VIM-202ENST00000421459 OR4S2Q8NH73 311 aa6□□□□□ -1.45
VIM-202ENST00000421459 CCL28Q9NRJ3 127 aa6□□□□□ -1.45
VIM-202ENST00000421459 MRPS7Q9Y2R9 242 aaKnown RBP6□□□□□ -1.45
VIM-202ENST00000421459 TRAV1-2A0A0B4J238 106 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 NUPR2A6NF83 97 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 OR2T8A6NH00 312 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 SULT1C2O00338 296 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 PDCD5O14737 125 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 CREBL2O60519 120 aaPredicted RBP5.99□□□□□ -1.45
VIM-202ENST00000421459 HLA-GP17693 338 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 RAB3BP20337 219 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 DTYMKP23919 212 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 PSMA1P25786 263 aaKnown RBP5.99□□□□□ -1.45
VIM-202ENST00000421459 OR2B8PP59922 312 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 RPL8P62917 257 aaKnown RBP5.99□□□□□ -1.45
VIM-202ENST00000421459 PRR20EP86478 221 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 PRR20CP86479 221 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 PRR20DP86480 221 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 PRR20BP86481 221 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 PRR20AP86496 221 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 KLK9Q2XQG4 91 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 ODF3L2Q3SX64 289 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 UBE2UQ5VVX9 321 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 HACD4Q5VWC8 232 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 C22orf42Q6IC83 251 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 OR4A47Q6IF82 309 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 WFDC3Q8IUB2 231 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 APRG1Q8IVJ8 170 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 GVQW1Q8N7I0 195 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 ZNF502Q8TBZ5 544 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 PHLDA1Q8WV24 401 aaPredicted RBP5.99□□□□□ -1.45
VIM-202ENST00000421459 SECTM1Q8WVN6 248 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 FCGR1BQ92637 280 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 RNF183Q96D59 192 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 HRASLSQ9HDD0 168 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 VCX3AQ9NNX9 186 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 ACOT13Q9NPJ3 140 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 KLK9Q9UKQ9 250 aa5.99□□□□□ -1.45
VIM-202ENST00000421459 TRBV7-1A0A0A6YYK4 115 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 SMIM31A0A1B0GVY4 71 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 IGLC7A0M8Q6 106 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 METTL21EPA6NDL7 271 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 CD36P16671 472 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 BMI1P35226 326 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 MAS1LP35410 378 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 MFAP2P55001 183 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 NANOS2P60321 138 aaKnown RBP5.98□□□□□ -1.45
VIM-202ENST00000421459 ANKRD55Q3KP44 614 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 TIMM50Q3ZCQ8 353 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 CNIH2Q6PI25 160 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 PLET1Q6UQ28 207 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 Q6ZWC4 215 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 SPAG16Q8N0X2 631 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 OR13F1Q8NGS4 319 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 VSTM2AQ8TAG5 236 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 ZNF414Q96IQ9 312 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 HSD17B10Q99714 261 aaKnown RBP5.98□□□□□ -1.45
VIM-202ENST00000421459 CHRDL1Q9BU40 450 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 ZNF436Q9C0F3 470 aaPredicted RBP5.98□□□□□ -1.45
VIM-202ENST00000421459 RBM38Q9H0Z9 239 aaKnown RBP5.98□□□□□ -1.45
VIM-202ENST00000421459 NDUFA13Q9P0J0 144 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 MRPL27Q9P0M9 148 aaKnown RBP5.98□□□□□ -1.45
VIM-202ENST00000421459 ANXA10Q9UJ72 324 aa5.98□□□□□ -1.45
VIM-202ENST00000421459 IGKV3-7A0A075B6H7 116 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 IGHV3-49A0A0A0MS15 119 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 TRAV25A0A0B4J276 109 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 UPK2O00526 184 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 TSPAN4O14817 238 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 DEFB4AO15263 64 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 TGOLN2O43493 480 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 DHFRP00374 187 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 HRASP01112 189 aa5.97□□□□□ -1.45
VIM-202ENST00000421459 CTSDP07339 412 aaPredicted RBP5.97□□□□□ -1.45
VIM-202ENST00000421459 CTXN2P0C2S0 81 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms