RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 TCTEX1D1Q8N7M0 179 aa9□□□□□ -0.97
DDX56-203ENST00000421223 SLC35D1Q9NTN3 355 aa9□□□□□ -0.97
DDX56-203ENST00000421223 CHTOPQ9Y3Y2 248 aaKnown RBP9□□□□□ -0.97
DDX56-203ENST00000421223 A0A1W2PPV4 95 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 PMS2P5A8MQ11 134 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 PPIHO43447 177 aaKnown RBP8.99□□□□□ -0.97
DDX56-203ENST00000421223 PAGE4O60829 102 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 RELBQ01201 579 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 MIC13Q5XKP0 118 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 DPPA3Q6W0C5 159 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 NECAP1Q8NC96 275 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 ACTR3CQ9C0K3 210 aaPredicted RBP8.99□□□□□ -0.97
DDX56-203ENST00000421223 TOLLIPQ9H0E2 274 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 ELOVL5Q9NYP7 299 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 WNK2Q9Y3S1 2297 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 IFNA1P01562 189 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 MDKP21741 143 aaPredicted RBP8.99□□□□□ -0.97
DDX56-203ENST00000421223 ATP6V1FQ16864 119 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 SMIM7Q9BQ49 75 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 GSN-AS1Q9NRJ2 163 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 IGHV3-72A0A0B4J1Y9 119 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 E7EQL1 145 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 IGHV2-5P01817 119 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 CGB3P0DN86 165 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 CGB7P0DN87 165 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 PSMB3P49720 205 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 OR13D1Q8NGV5 346 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 OR10X1Q8NGY0 326 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 MS4A5Q9H3V2 200 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 TMEM106BQ9NUM4 274 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 METTL1Q9UBP6 276 aaKnown RBP8.99□□□□□ -0.97
DDX56-203ENST00000421223 VAX2Q9UIW0 290 aa8.99□□□□□ -0.97
DDX56-203ENST00000421223 TGIF2-C20orf24A0A0A6YYL0 155 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 C17orf112F2Z3M2 114 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 NDUFB3O43676 98 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 ENSAO43768 121 aaKnown RBP8.98□□□□□ -0.97
DDX56-203ENST00000421223 GFRA3O60609 400 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 IGHV3-48P01763 117 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 MBP02144 154 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 DIAPH2-AS1Q14236 149 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 ETFRF1Q6IPR1 90 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 NUP37Q8NFH4 326 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 MBD3L1Q8WWY6 194 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 ZCCHC14Q8WYQ9 949 aaKnown RBP8.98□□□□□ -0.97
DDX56-203ENST00000421223 RNASE6Q93091 150 aaKnown RBP8.98□□□□□ -0.97
DDX56-203ENST00000421223 SEBOXQ9HB31 216 aaPredicted RBP8.98□□□□□ -0.97
DDX56-203ENST00000421223 RAB9BQ9NP90 201 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 NIT2Q9NQR4 276 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.98□□□□□ -0.97
DDX56-203ENST00000421223 ZNF729A6NN14 1252 aaPredicted RBP8.98□□□□□ -0.97
DDX56-203ENST00000421223 CCL21O00585 134 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 CYB5BO43169 146 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 ACTL6BO94805 426 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 APELAP0DMC3 54 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 CDC34P49427 236 aaPredicted RBP8.98□□□□□ -0.97
DDX56-203ENST00000421223 THBS3P49746 956 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 TMEM200BQ69YZ2 307 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 MOB3BQ86TA1 216 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 C1orf87Q8N0U7 546 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 FAM222BQ8WU58 562 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 NGBQ9NPG2 151 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 OR51B2Q9Y5P1 312 aa8.98□□□□□ -0.97
DDX56-203ENST00000421223 TET2Q6N021 2002 aaPredicted RBP8.98□□□□□ -0.97
DDX56-203ENST00000421223 CTXND1A0A1B0GTU2 59 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 SRRM4A7MD48 611 aaKnown RBP8.97□□□□□ -0.97
DDX56-203ENST00000421223 J3QR06 171 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 LY6HO94772 140 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 MLANAQ16655 118 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 FAM90A2PQ658T7 463 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 ZNF714Q96N38 554 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 ZNF251Q9BRH9 671 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 MRPL20Q9BYC9 149 aaKnown RBP8.97□□□□□ -0.97
DDX56-203ENST00000421223 CISD1Q9NZ45 108 aaKnown RBP8.97□□□□□ -0.97
DDX56-203ENST00000421223 RPUSD1Q9UJJ7 312 aaKnown RBP8.97□□□□□ -0.97
DDX56-203ENST00000421223 RAI1Q7Z5J4 1906 aaPredicted RBP8.97□□□□□ -0.97
DDX56-203ENST00000421223 TMEM178BH3BS89 294 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 DVL1O14640 695 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 CA2P00918 260 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 S100A8P05109 93 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 CT45A6P0DMU7 189 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 CT45A5P0DMU8 189 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 CT45A7P0DMV0 189 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 CHRNB4P30926 498 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 MEF2BQ02080 365 aaPredicted RBP8.97□□□□□ -0.97
DDX56-203ENST00000421223 ACOT6Q3I5F7 207 aaPredicted RBP8.97□□□□□ -0.97
DDX56-203ENST00000421223 C4orf17Q53FE4 359 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 HEPN1Q6WQI6 88 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 C1QL4Q86Z23 238 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 OR10W1Q8NGF6 305 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 OR51G1Q8NGK1 321 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 TRAV1-1A0A0B4J248 108 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 HRASP01112 189 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 CXCL1P09341 107 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 SMIM6P0DI80 62 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 HNF1AP20823 631 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 NPY1RP25929 384 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 GNB2P62879 340 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 FABP9Q0Z7S8 132 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 RTL8BQ17RB0 113 aa8.97□□□□□ -0.97
DDX56-203ENST00000421223 CR1LQ2VPA4 569 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms