RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 OR13F1Q8NGS4 319 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 TMEM167AQ8TBQ9 72 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 NUDCD2Q8WVJ2 157 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 CENPOQ9BU64 300 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 RNF167Q9H6Y7 350 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 SLC2A9Q9NRM0 540 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 TAS2R8Q9NYW2 309 aa9.53□□□□□ -0.88
LINC00339-203ENST00000420503 DNAH6Q9C0G6 4158 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 DPPA5A6NC42 116 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 PDCD5O14737 125 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 TNFSF12O43508 249 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 CRYGCP07315 174 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 C8orf88P0DMB2 117 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 CTRB1P17538 263 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 RAB3BP20337 219 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 MYL9P24844 172 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 PSMD7P51665 324 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 ARFRP1Q13795 201 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 CTRB2Q6GPI1 263 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 WFDC3Q8IUB2 231 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 OR1L6Q8NGR2 347 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 TCTEX1D2Q8WW35 142 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 EEF1AKMT3Q96AZ1 226 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 OR2A7Q96R45 310 aa9.52□□□□□ -0.89
LINC00339-203ENST00000420503 MRPS26Q9BYN8 205 aaKnown RBP9.52□□□□□ -0.89
LINC00339-203ENST00000420503 RYR1P21817 5038 aa9.51□□□□□ -0.89
LINC00339-203ENST00000420503 IGHV3-21A0A0B4J1V1 117 aa9.51□□□□□ -0.89
LINC00339-203ENST00000420503 IFITM5A6NNB3 132 aa9.51□□□□□ -0.89
LINC00339-203ENST00000420503 ZNF207O43670 478 aaKnown RBP9.51□□□□□ -0.89
LINC00339-203ENST00000420503 DIRAS3O95661 229 aa9.51□□□□□ -0.89
LINC00339-203ENST00000420503 HLA-DQB1P01920 261 aa9.51□□□□□ -0.89
LINC00339-203ENST00000420503 ALDH3B2P48448 385 aa9.51□□□□□ -0.89
LINC00339-203ENST00000420503 TIMM50Q3ZCQ8 353 aa9.51□□□□□ -0.89
LINC00339-203ENST00000420503 FAM106AQ4KMX7 169 aa9.51□□□□□ -0.89
LINC00339-203ENST00000420503 FAM209BQ5JX69 171 aa9.51□□□□□ -0.89
LINC00339-203ENST00000420503 SLC25A42Q86VD7 318 aa9.51□□□□□ -0.89
LINC00339-203ENST00000420503 TPRA1Q86W33 373 aa9.51□□□□□ -0.89
LINC00339-203ENST00000420503 ZNF502Q8TBZ5 544 aa9.51□□□□□ -0.89
LINC00339-203ENST00000420503 PHLDA1Q8WV24 401 aaPredicted RBP9.51□□□□□ -0.89
LINC00339-203ENST00000420503 ZNF414Q96IQ9 312 aa9.51□□□□□ -0.89
LINC00339-203ENST00000420503 FUNDC2Q9BWH2 189 aa9.51□□□□□ -0.89
LINC00339-203ENST00000420503 OR2W1Q9Y3N9 320 aa9.51□□□□□ -0.89
LINC00339-203ENST00000420503 LOC100506127A0A0U1RQW1 187 aa9.5□□□□□ -0.89
LINC00339-203ENST00000420503 IGLC7A0M8Q6 106 aa9.5□□□□□ -0.89
LINC00339-203ENST00000420503 SSX5O60225 188 aa9.5□□□□□ -0.89
LINC00339-203ENST00000420503 SDC2P34741 201 aa9.5□□□□□ -0.89
LINC00339-203ENST00000420503 BMI1P35226 326 aa9.5□□□□□ -0.89
LINC00339-203ENST00000420503 TGFBR1P36897 503 aa9.5□□□□□ -0.89
LINC00339-203ENST00000420503 TALDO1P37837 337 aa9.5□□□□□ -0.89
LINC00339-203ENST00000420503 NANOS2P60321 138 aaKnown RBP9.5□□□□□ -0.89
LINC00339-203ENST00000420503 KLK9Q2XQG4 91 aa9.5□□□□□ -0.89
LINC00339-203ENST00000420503 RBPMS2Q6ZRY4 209 aaKnown RBP9.5□□□□□ -0.89
LINC00339-203ENST00000420503 Q6ZS49 121 aa9.5□□□□□ -0.89
LINC00339-203ENST00000420503 Q6ZWC4 215 aa9.5□□□□□ -0.89
LINC00339-203ENST00000420503 OR5B3Q8NH48 314 aa9.5□□□□□ -0.89
LINC00339-203ENST00000420503 RNF183Q96D59 192 aa9.5□□□□□ -0.89
LINC00339-203ENST00000420503 KLK9Q9UKQ9 250 aa9.5□□□□□ -0.89
LINC00339-203ENST00000420503 TMEM235A6NFC5 223 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 NOTOA8MTQ0 251 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 CREBL2O60519 120 aaPredicted RBP9.49□□□□□ -0.89
LINC00339-203ENST00000420503 FCER2P06734 321 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 CLEC2LP0C7M8 214 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 HLA-GP17693 338 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 OR2B8PP59922 312 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 RPL8P62917 257 aaKnown RBP9.49□□□□□ -0.89
LINC00339-203ENST00000420503 CDNFQ49AH0 187 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 OR4A47Q6IF82 309 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 APRG1Q8IVJ8 170 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 MFSD4AQ8N468 514 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 OR2C3Q8N628 320 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 OR10W1Q8NGF6 305 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 OR4S2Q8NH73 311 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 ATG5Q9H1Y0 275 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 CCL28Q9NRJ3 127 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 MRPS7Q9Y2R9 242 aaKnown RBP9.49□□□□□ -0.89
LINC00339-203ENST00000420503 PRELID3BQ9Y3B1 194 aa9.49□□□□□ -0.89
LINC00339-203ENST00000420503 OR2T8A6NH00 312 aa9.48□□□□□ -0.89
LINC00339-203ENST00000420503 DEFB4AO15263 64 aa9.48□□□□□ -0.89
LINC00339-203ENST00000420503 DEFA4P12838 97 aa9.48□□□□□ -0.89
LINC00339-203ENST00000420503 RAB6AP20340 208 aa9.48□□□□□ -0.89
LINC00339-203ENST00000420503 MFAP2P55001 183 aa9.48□□□□□ -0.89
LINC00339-203ENST00000420503 APOC4P55056 127 aa9.48□□□□□ -0.89
LINC00339-203ENST00000420503 SFXN4Q6P4A7 337 aa9.48□□□□□ -0.89
LINC00339-203ENST00000420503 TMEM190Q8WZ59 177 aa9.48□□□□□ -0.89
LINC00339-203ENST00000420503 CHRDL1Q9BU40 450 aa9.48□□□□□ -0.89
LINC00339-203ENST00000420503 ZNF436Q9C0F3 470 aaPredicted RBP9.48□□□□□ -0.89
LINC00339-203ENST00000420503 TP53TG1Q9Y2A0 90 aa9.48□□□□□ -0.89
LINC00339-203ENST00000420503 FAT2Q9NYQ8 4349 aa9.47□□□□□ -0.89
LINC00339-203ENST00000420503 IGHV3-49A0A0A0MS15 119 aa9.47□□□□□ -0.89
LINC00339-203ENST00000420503 TRAV25A0A0B4J276 109 aa9.47□□□□□ -0.89
LINC00339-203ENST00000420503 F8W735 103 aaPredicted RBP9.47□□□□□ -0.89
LINC00339-203ENST00000420503 GABARAPO95166 117 aa9.47□□□□□ -0.89
LINC00339-203ENST00000420503 DTYMKP23919 212 aa9.47□□□□□ -0.89
LINC00339-203ENST00000420503 RANBP1P43487 201 aa9.47□□□□□ -0.89
LINC00339-203ENST00000420503 LSM3P62310 102 aaKnown RBP9.47□□□□□ -0.89
LINC00339-203ENST00000420503 MXD1Q05195 221 aa9.47□□□□□ -0.89
LINC00339-203ENST00000420503 CTF1Q16619 201 aa9.47□□□□□ -0.89
LINC00339-203ENST00000420503 ANKRD55Q3KP44 614 aa9.47□□□□□ -0.89
LINC00339-203ENST00000420503 PLET1Q6UQ28 207 aa9.47□□□□□ -0.89
LINC00339-203ENST00000420503 SPAG8Q99932 426 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms