RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 NUDT2P50583 147 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 TSPEAR-AS2P59090 65 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 FABP9Q0Z7S8 132 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 MRPL51Q4U2R6 128 aaKnown RBP1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 LDLRAD2Q5SZI1 272 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 C5orf46Q6UWT4 87 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 GOLT1AQ6ZVE7 132 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 SCXQ7RTU7 201 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 SPATA12Q7Z6I5 190 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 SMG6Q86US8 1419 aaKnown RBP1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 OOSP2Q86WS3 158 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 PHF13Q86YI8 300 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 EXOC3-AS1Q8N2X6 119 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 DAND5Q8N907 189 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 OR11H6Q8NGC7 330 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 OR4K13Q8NH42 304 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 MCFD2Q8NI22 146 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 CD200R1Q8TD46 325 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 MS4A6EQ96DS6 147 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 PYURFQ96I23 114 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 KLF6Q99612 283 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 PKMYT1Q99640 499 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 UPK3BQ9BT76 320 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 MIXL1Q9H2W2 232 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 C11orf1Q9H5F2 150 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 GPR84Q9NQS5 396 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 CYSLTR1Q9Y271 337 aa1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 YLPM1P49750 1951 aaKnown RBP1.7□□□□□ -2.14
HMGB1P49-201ENST00000418882 ARHGAP35Q9NRY4 1499 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 CEP170Q5SW79 1584 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 A0A1B0GV72 72 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 TRAPPC13A5PLN9 417 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 C17orf51A8MQB3 221 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 C9JCJ5 164 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 SH2D1AO60880 128 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 ATG12O94817 140 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 IFNA21P01568 189 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 SERPINE1P05121 402 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 IGHV3-30-3P0DP02 117 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 PSMD8P48556 350 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 SERPINB10P48595 397 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 GNG5P63218 68 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 CST6Q15828 149 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 FAM229BQ4G0N7 80 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 TMPPEQ6ZT21 453 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 SLC22A24Q8N4F4 322 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 OR10J5Q8NHC4 309 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 CT55Q8WUE5 264 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 OR5P3Q8WZ94 311 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 IGF2BP2-AS1Q96M15 143 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 C11orf68Q9H3H3 251 aaKnown RBP1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 C19orf12Q9NSK7 152 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 RSL24D1Q9UHA3 163 aaKnown RBP1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 PRNDQ9UKY0 176 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 ABCC12Q96J65 1359 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 NAV1Q8NEY1 1877 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 DENND4BO75064 1496 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 LRRC9Q6ZRR7 1453 aa1.69□□□□□ -2.14
HMGB1P49-201ENST00000418882 CHD5Q8TDI0 1954 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 MYO5BQ9ULV0 1848 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 GCC2Q8IWJ2 1684 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 SPATA31E1Q6ZUB1 1445 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 UACAQ9BZF9 1416 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 CNTLNQ9NXG0 1405 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 A0A1B0GV50 99 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 MDFIC2A0A1B0GVS7 189 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 IGSF23A1L1A6 192 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 LEUTXA8MZ59 168 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 OR11H12B2RN74 326 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 H3BQ85 93 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 GPR31O00270 319 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 SLC25A20O43772 301 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 IFNA14P01570 189 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 GUSBP08236 651 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 GZMHP20718 246 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 SERPINB1P30740 379 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 GLRXP35754 106 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 TFAMQ00059 246 aaKnown RBP1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 GDPD1Q8N9F7 314 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 OR11H1Q8NG94 326 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 OR13C8Q8NGS7 320 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 OR13D1Q8NGV5 346 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 OR11H2Q8NH07 326 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 OR13C6PQ8NH95 151 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 NMNAT3Q96T66 252 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 WDR61Q9GZS3 305 aaKnown RBP1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 FBXL12Q9NXK8 326 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 ZNF443Q9Y2A4 671 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 KLK5Q9Y337 293 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 KMT2EQ8IZD2 1858 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 PTPN23Q9H3S7 1636 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 SORL1Q92673 2214 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 NUP155O75694 1391 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 LRRIQ1Q96JM4 1722 aa1.68□□□□□ -2.14
HMGB1P49-201ENST00000418882 E9PCH4 1651 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 HFM1A2PYH4 1435 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 ZMYM4Q5VZL5 1548 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 BCORL1Q5H9F3 1711 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 TRBV20OR9-2A0A075B6H5 130 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 TRBV24-1A0A075B6N3 115 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms