RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 TSPAN5P62079 268 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 KLK9Q2XQG4 91 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 C15orf32Q32M92 178 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 IL34Q6ZMJ4 242 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 DMBX1Q8NFW5 382 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 TMEM140Q9NV12 185 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 FBXL7Q9UJT9 491 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 KLK9Q9UKQ9 250 aa12.58□□□□□ -0.4
LINC00404-201ENST00000418660 TRAV3A0A0B4J244 114 aa12.57□□□□□ -0.4
LINC00404-201ENST00000418660 BMPR1BO00238 502 aa12.57□□□□□ -0.4
LINC00404-201ENST00000418660 CTRB1P17538 263 aa12.57□□□□□ -0.4
LINC00404-201ENST00000418660 OR2B8PP59922 312 aa12.57□□□□□ -0.4
LINC00404-201ENST00000418660 CTRB2Q6GPI1 263 aa12.57□□□□□ -0.4
LINC00404-201ENST00000418660 LPCAT3Q6P1A2 487 aa12.57□□□□□ -0.4
LINC00404-201ENST00000418660 C19orf35Q6ZS72 473 aa12.57□□□□□ -0.4
LINC00404-201ENST00000418660 GPR141Q7Z602 305 aa12.57□□□□□ -0.4
LINC00404-201ENST00000418660 HAPLN4Q86UW8 402 aa12.57□□□□□ -0.4
LINC00404-201ENST00000418660 DGCR14Q96DF8 476 aaKnown RBP12.57□□□□□ -0.4
LINC00404-201ENST00000418660 FANCD2OSQ96PS1 177 aa12.57□□□□□ -0.4
LINC00404-201ENST00000418660 SRSF8Q9BRL6 282 aaKnown RBP12.57□□□□□ -0.4
LINC00404-201ENST00000418660 COMMD5Q9GZQ3 224 aa12.57□□□□□ -0.4
LINC00404-201ENST00000418660 SIGLEC8Q9NYZ4 499 aa12.57□□□□□ -0.4
LINC00404-201ENST00000418660 CSN3P07498 182 aa12.56□□□□□ -0.4
LINC00404-201ENST00000418660 HIST1H1BP16401 226 aaKnown RBP12.56□□□□□ -0.4
LINC00404-201ENST00000418660 LPAR6P43657 344 aa12.56□□□□□ -0.4
LINC00404-201ENST00000418660 ERVK-16P61578 105 aa12.56□□□□□ -0.4
LINC00404-201ENST00000418660 CADM3Q8N126 398 aa12.56□□□□□ -0.4
LINC00404-201ENST00000418660 PEMTQ9UBM1 199 aa12.56□□□□□ -0.4
LINC00404-201ENST00000418660 EXTL2Q9UBQ6 330 aa12.56□□□□□ -0.4
LINC00404-201ENST00000418660 DNAH9Q9NYC9 4486 aa12.55□□□□□ -0.4
LINC00404-201ENST00000418660 MARCH11A6NNE9 402 aa12.55□□□□□ -0.4
LINC00404-201ENST00000418660 TPPPO94811 219 aa12.55□□□□□ -0.4
LINC00404-201ENST00000418660 NDUFB8O95169 186 aa12.55□□□□□ -0.4
LINC00404-201ENST00000418660 DEFA4P12838 97 aa12.55□□□□□ -0.4
LINC00404-201ENST00000418660 RPA2P15927 270 aa12.55□□□□□ -0.4
LINC00404-201ENST00000418660 S100GP29377 79 aa12.55□□□□□ -0.4
LINC00404-201ENST00000418660 UCP3P55916 312 aa12.55□□□□□ -0.4
LINC00404-201ENST00000418660 ZNF585BQ52M93 769 aa12.55□□□□□ -0.4
LINC00404-201ENST00000418660 FCAMRQ8WWV6 532 aa12.55□□□□□ -0.4
LINC00404-201ENST00000418660 ASCL2Q99929 193 aa12.55□□□□□ -0.4
LINC00404-201ENST00000418660 DMRT1Q9Y5R6 373 aa12.55□□□□□ -0.4
LINC00404-201ENST00000418660 IGLV11-55A0A075B6I3 123 aa12.54□□□□□ -0.4
LINC00404-201ENST00000418660 IGLC7A0M8Q6 106 aa12.54□□□□□ -0.4
LINC00404-201ENST00000418660 H0Y980 276 aa12.54□□□□□ -0.4
LINC00404-201ENST00000418660 GGCTO75223 188 aaKnown RBP12.54□□□□□ -0.4
LINC00404-201ENST00000418660 KRASP01116 189 aa12.54□□□□□ -0.4
LINC00404-201ENST00000418660 REG1AP05451 166 aa12.54□□□□□ -0.4
LINC00404-201ENST00000418660 PHLDA2Q53GA4 152 aa12.54□□□□□ -0.4
LINC00404-201ENST00000418660 THOC7Q6I9Y2 204 aaKnown RBP12.54□□□□□ -0.4
LINC00404-201ENST00000418660 C15orf40Q8WUR7 153 aa12.54□□□□□ -0.4
LINC00404-201ENST00000418660 QTRT1Q9BXR0 403 aaKnown RBP12.54□□□□□ -0.4
LINC00404-201ENST00000418660 FAM212BQ9NTI7 297 aaPredicted RBP12.54□□□□□ -0.4
LINC00404-201ENST00000418660 U3KQK5 164 aa12.54□□□□□ -0.4
LINC00404-201ENST00000418660 COL7A1Q02388 2944 aa12.53□□□□□ -0.4
LINC00404-201ENST00000418660 TEX50A0A1B0GTY4 177 aa12.53□□□□□ -0.4
LINC00404-201ENST00000418660 PPP5D1E7EU14 171 aa12.53□□□□□ -0.4
LINC00404-201ENST00000418660 TRAPPC2P0DI81 140 aa12.53□□□□□ -0.4
LINC00404-201ENST00000418660 TRAPPC2BP0DI82 140 aa12.53□□□□□ -0.4
LINC00404-201ENST00000418660 MECP2P51608 486 aaKnown RBP12.53□□□□□ -0.4
LINC00404-201ENST00000418660 RNASE12Q5GAN4 147 aaKnown RBP12.53□□□□□ -0.4
LINC00404-201ENST00000418660 HSD17B13Q7Z5P4 300 aaPredicted RBP12.53□□□□□ -0.4
LINC00404-201ENST00000418660 SLC38A6Q8IZM9 456 aa12.53□□□□□ -0.4
LINC00404-201ENST00000418660 Q8N1Y9 231 aa12.53□□□□□ -0.4
LINC00404-201ENST00000418660 OR52I2Q8NH67 350 aa12.53□□□□□ -0.4
LINC00404-201ENST00000418660 EEF1AKMT3Q96AZ1 226 aa12.53□□□□□ -0.4
LINC00404-201ENST00000418660 WWC2-AS2Q96NR7 200 aa12.53□□□□□ -0.4
LINC00404-201ENST00000418660 ABHD1Q96SE0 405 aa12.53□□□□□ -0.4
LINC00404-201ENST00000418660 KLK11Q9UBX7 282 aa12.53□□□□□ -0.4
LINC00404-201ENST00000418660 SORL1Q92673 2214 aa12.53□□□□□ -0.4
LINC00404-201ENST00000418660 M0QYG6 137 aa12.52□□□□□ -0.41
LINC00404-201ENST00000418660 SNAPC5O75971 98 aa12.52□□□□□ -0.41
LINC00404-201ENST00000418660 IGHV3-23P01764 117 aa12.52□□□□□ -0.41
LINC00404-201ENST00000418660 IFNA6P05013 189 aa12.52□□□□□ -0.41
LINC00404-201ENST00000418660 G6PCP35575 357 aa12.52□□□□□ -0.41
LINC00404-201ENST00000418660 SPCS2Q15005 226 aa12.52□□□□□ -0.41
LINC00404-201ENST00000418660 RNASE10Q5GAN6 216 aaKnown RBP12.52□□□□□ -0.41
LINC00404-201ENST00000418660 CLEC19AQ6UXS0 136 aa12.52□□□□□ -0.41
LINC00404-201ENST00000418660 TBC1D26Q86UD7 250 aa12.52□□□□□ -0.41
LINC00404-201ENST00000418660 Q8N402 240 aa12.52□□□□□ -0.41
LINC00404-201ENST00000418660 OR10W1Q8NGF6 305 aa12.52□□□□□ -0.41
LINC00404-201ENST00000418660 OR1L8Q8NGR8 309 aa12.52□□□□□ -0.41
LINC00404-201ENST00000418660 CXorf58Q96LI9 332 aa12.52□□□□□ -0.41
LINC00404-201ENST00000418660 CCDC140Q96MF4 163 aa12.52□□□□□ -0.41
LINC00404-201ENST00000418660 MIXL1Q9H2W2 232 aa12.52□□□□□ -0.41
LINC00404-201ENST00000418660 MTFP1Q9UDX5 166 aa12.52□□□□□ -0.41
LINC00404-201ENST00000418660 TRBV7-1A0A0A6YYK4 115 aa12.51□□□□□ -0.41
LINC00404-201ENST00000418660 LGALS9O00182 355 aa12.51□□□□□ -0.41
LINC00404-201ENST00000418660 CYB5BO43169 146 aa12.51□□□□□ -0.41
LINC00404-201ENST00000418660 OR2C1O95371 312 aa12.51□□□□□ -0.41
LINC00404-201ENST00000418660 HLA-AP01891 365 aaKnown RBP12.51□□□□□ -0.41
LINC00404-201ENST00000418660 FRMD6-AS1P0C7T7 363 aa12.51□□□□□ -0.41
LINC00404-201ENST00000418660 TBPP20226 339 aa12.51□□□□□ -0.41
LINC00404-201ENST00000418660 ARL3P36405 182 aa12.51□□□□□ -0.41
LINC00404-201ENST00000418660 LCN12Q6JVE5 192 aa12.51□□□□□ -0.41
LINC00404-201ENST00000418660 GPHB5Q86YW7 130 aa12.51□□□□□ -0.41
LINC00404-201ENST00000418660 CLVS1Q8IUQ0 354 aaPredicted RBP12.51□□□□□ -0.41
LINC00404-201ENST00000418660 SBSPONQ8IVN8 264 aa12.51□□□□□ -0.41
LINC00404-201ENST00000418660 ARRDC1Q8N5I2 433 aa12.51□□□□□ -0.41
LINC00404-201ENST00000418660 OR2K2Q8NGT1 345 aa12.51□□□□□ -0.41
LINC00404-201ENST00000418660 NDUFA4L2Q9NRX3 87 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms