RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 SMCO1Q147U7 214 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 GGNBP1Q5YKI7 109 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 GSG1LQ6UXU4 331 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 LHFPL5Q8TAF8 219 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 GON7Q9BXV9 100 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 MED28Q9H204 178 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 OR51J1Q9H342 316 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 PLSCR3Q9NRY6 295 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.72□□□□□ -1.33
TRIM48-201ENST00000417545 CACFD1Q9UGQ2 172 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 ALG5Q9Y673 324 aa6.72□□□□□ -1.33
TRIM48-201ENST00000417545 FN1P02751 2386 aaKnown RBP6.72□□□□□ -1.33
TRIM48-201ENST00000417545 NSD1Q96L73 2696 aaPredicted RBP6.71□□□□□ -1.33
TRIM48-201ENST00000417545 A0A1W2PN81 502 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 CEBPZOSA8MTT3 80 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 CCSO14618 274 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 ATP6V0E1O15342 81 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 CYB5BO43169 146 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 ADAP1O75689 374 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 NXPH3O95157 252 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 IGHG2P01859 326 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 TRAPPC2P0DI81 140 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 TRAPPC2BP0DI82 140 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 CHRNA7P36544 502 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 CX3CL1P78423 397 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 PJVKQ0ZLH3 352 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 FOXL1Q12952 345 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 OXA1LQ15070 435 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 IZUMO4Q1ZYL8 232 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 UNQ5815/PRO19632Q6UWF5 114 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 ZNF562Q6V9R5 426 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 Q6ZSV7 163 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 CENPVQ7Z7K6 275 aaPredicted RBP6.71□□□□□ -1.34
TRIM48-201ENST00000417545 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.71□□□□□ -1.34
TRIM48-201ENST00000417545 LRTM2Q8N967 370 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 OR1L8Q8NGR8 309 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 SRSF12Q8WXF0 261 aaKnown RBP6.71□□□□□ -1.34
TRIM48-201ENST00000417545 TMEM158Q8WZ71 300 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 GPR146Q96CH1 333 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 HSPB9Q9BQS6 159 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 FAM103A1Q9BTL3 118 aaKnown RBP6.71□□□□□ -1.34
TRIM48-201ENST00000417545 QTRT1Q9BXR0 403 aaKnown RBP6.71□□□□□ -1.34
TRIM48-201ENST00000417545 ZNF702PQ9H963 129 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 PLEKHA3Q9HB20 300 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 ZNF355PQ9NSJ1 428 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 GSKIPQ9P0R6 139 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 MGAT4CQ9UBM8 478 aa6.71□□□□□ -1.34
TRIM48-201ENST00000417545 IGHV7-81A0A0B4J1V7 117 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 TRAV3A0A0B4J244 114 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 TRAV41A0A0B4J266 112 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 A0A1B0GU03 582 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 A0A1B0GUS0 222 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 FCN1O00602 326 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 NDUFA7O95182 113 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 CRYGBP07316 175 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 APELAP0DMC3 54 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 HKR1P10072 659 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 COMPP49747 757 aaPredicted RBP6.7□□□□□ -1.34
TRIM48-201ENST00000417545 RELBQ01201 579 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 IAH1Q2TAA2 248 aaPredicted RBP6.7□□□□□ -1.34
TRIM48-201ENST00000417545 TMEM95Q3KNT9 176 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 KHDC1LQ5JSQ8 128 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 TMEM65Q6PI78 240 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 OR5B3Q8NH48 314 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 LINC00527Q9UJ94 153 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 FOXA2Q9Y261 457 aaPredicted RBP6.7□□□□□ -1.34
TRIM48-201ENST00000417545 RNF114Q9Y508 228 aa6.7□□□□□ -1.34
TRIM48-201ENST00000417545 ANK3Q12955 4377 aaKnown RBP6.7□□□□□ -1.34
TRIM48-201ENST00000417545 A0A0G2JRQ6 117 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 CLPSL1A2RUU4 121 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 PSMB11A5LHX3 300 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 MSGN1A6NI15 193 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 ST8SIA3O43173 380 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 MED6O75586 246 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 TSPAN9O75954 239 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 AMY1AP04745 511 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 DEFA4P12838 97 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 SNCAP37840 140 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 SMCPP49901 116 aaPredicted RBP6.69□□□□□ -1.34
TRIM48-201ENST00000417545 RIPPLY3P57055 190 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 S100A10P60903 97 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 HSPE1P61604 102 aaKnown RBP6.69□□□□□ -1.34
TRIM48-201ENST00000417545 ERHP84090 104 aaKnown RBP6.69□□□□□ -1.34
TRIM48-201ENST00000417545 SPINK9Q5DT21 86 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 C10orf55Q5SWW7 151 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 HSD17B13Q7Z5P4 300 aaPredicted RBP6.69□□□□□ -1.34
TRIM48-201ENST00000417545 PRIMA1Q86XR5 153 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 CADM3Q8N126 398 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 STPG2Q8N412 459 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 KLHDC1Q8N7A1 406 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 LFNGQ8NES3 379 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 OR4X2Q8NGF9 303 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 SGMS2Q8NHU3 365 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 TAF15Q92804 592 aaKnown RBP eCLIP6.69□□□□□ -1.34
TRIM48-201ENST00000417545 TMEM68Q96MH6 324 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 NOL4LQ96MY1 436 aaPredicted RBP6.69□□□□□ -1.34
TRIM48-201ENST00000417545 HIPK2Q9H2X6 1198 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 C16orf95Q9H693 158 aa6.69□□□□□ -1.34
TRIM48-201ENST00000417545 HEYLQ9NQ87 328 aaPredicted RBP6.69□□□□□ -1.34
TRIM48-201ENST00000417545 TMEM14BQ9NUH8 114 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms