RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 PYDC2Q56P42 97 aa6.91□□□□□ -1.3
LINC01238-201ENST00000416204 IDNKQ5T6J7 187 aa6.91□□□□□ -1.3
LINC01238-201ENST00000416204 CNIH2Q6PI25 160 aa6.91□□□□□ -1.3
LINC01238-201ENST00000416204 RBPMS2Q6ZRY4 209 aaKnown RBP6.91□□□□□ -1.3
LINC01238-201ENST00000416204 TMEM217Q8N7C4 229 aa6.91□□□□□ -1.3
LINC01238-201ENST00000416204 STPG3Q8N7X2 389 aa6.91□□□□□ -1.3
LINC01238-201ENST00000416204 NECAP1Q8NC96 275 aa6.91□□□□□ -1.3
LINC01238-201ENST00000416204 C11orf45Q8TAV5 145 aa6.91□□□□□ -1.3
LINC01238-201ENST00000416204 CCDC140Q96MF4 163 aa6.91□□□□□ -1.3
LINC01238-201ENST00000416204 OR2D2Q9H210 308 aa6.91□□□□□ -1.3
LINC01238-201ENST00000416204 ZNF430Q9H8G1 570 aaPredicted RBP6.91□□□□□ -1.3
LINC01238-201ENST00000416204 TP53TG1Q9Y2A0 90 aa6.91□□□□□ -1.3
LINC01238-201ENST00000416204 FAM25AB3EWG3 89 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 FAM25CB3EWG5 89 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 FAM25GB3EWG6 89 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 M0R2N4 97 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 ITGB1BP1O14713 200 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 BET1O15155 118 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 SOCS1O15524 211 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 HPGDSO60760 199 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 CRYZL1O95825 349 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 RANBP1P43487 201 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 SCAND1P57086 179 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 RPS27AP62979 156 aaKnown RBP6.9□□□□□ -1.3
LINC01238-201ENST00000416204 UNC119Q13432 240 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 IL18Q14116 193 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 BAK1Q16611 211 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 ANKRD55Q3KP44 614 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 HSD17B12Q53GQ0 312 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 TMEM177Q53S58 311 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 TRIQKQ629K1 86 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 MZT2BQ6NZ67 158 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 CADM3Q8N126 398 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 OR2C3Q8N628 320 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 C2CD4CQ8TF44 421 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 PTX4Q96A99 478 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 DERL3Q96Q80 235 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 TMEM59Q9BXS4 323 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 PLEKHJ1Q9NW61 149 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 SDHAF2Q9NX18 166 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 TBC1D24Q9ULP9 559 aa6.9□□□□□ -1.3
LINC01238-201ENST00000416204 IGHV3OR16-8A0A075B7F1 116 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 LGALS9O00182 355 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 RAB27BO00194 218 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 REG1AP05451 166 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 TRAPPC2P0DI81 140 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 TRAPPC2BP0DI82 140 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 RPA2P15927 270 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 SRMP19623 302 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 UBE2KP61086 200 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 CBX3Q13185 183 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 ODF3L2Q3SX64 289 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 VMA21Q3ZAQ7 101 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 FAM106AQ4KMX7 169 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 OR2B11Q5JQS5 317 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 MOB1BQ7L9L4 216 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 NR2C2APQ86WQ0 139 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 ZNF575Q86XF7 245 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 GPHB5Q86YW7 130 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 APRG1Q8IVJ8 170 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 VKORC1L1Q8N0U8 176 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 C15orf40Q8WUR7 153 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 MAFIPQ8WZ33 124 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 FYTTD1Q96QD9 318 aaKnown RBP6.89□□□□□ -1.31
LINC01238-201ENST00000416204 Q9N2K0 584 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 EXTL2Q9UBQ6 330 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 SPATA2Q9UM82 520 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 MUC4Q99102 2169 aa6.89□□□□□ -1.31
LINC01238-201ENST00000416204 MFSD2BA6NFX1 497 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 PRSS29PA6NIE9 313 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 LINC00473A8K010 186 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 E7EUB6 86 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 UBE2CO00762 179 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 CTDSPLO15194 276 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 ACTL6BO94805 426 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 SAA1P0DJI8 122 aaPredicted RBP6.88□□□□□ -1.31
LINC01238-201ENST00000416204 MYOD1P15172 320 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 AREGP15514 252 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 ATF4P18848 351 aaPredicted RBP6.88□□□□□ -1.31
LINC01238-201ENST00000416204 ELK1P19419 428 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 INPP1P49441 399 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 P2RY14Q15391 338 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 RTL8BQ17RB0 113 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 IGSF11Q5DX21 431 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 SLC38A6Q8IZM9 456 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 TTC9CQ8N5M4 171 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 TEX45Q8NA69 505 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 DUSP18Q8NEJ0 188 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 OR6M1Q8NGM8 313 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 SPIN2AQ99865 258 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 RARRES2Q99969 163 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 SPIN2BQ9BPZ2 258 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 UQCC2Q9BRT2 126 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 PLA2G2EQ9NZK7 142 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 APLNQ9ULZ1 77 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 ETV7Q9Y603 341 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 V9GY05 133 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
LINC01238-201ENST00000416204 A0A1B0GW64 132 aa6.87□□□□□ -1.31
LINC01238-201ENST00000416204 SMIM30A4D0T7 59 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms