RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 DEFA4P12838 97 aa11.38□□□□□ -0.59
DDX56-202ENST00000415758 NFYAP23511 347 aaPredicted RBP11.38□□□□□ -0.59
DDX56-202ENST00000415758 PTBP1P26599 531 aaKnown RBP eCLIP11.38□□□□□ -0.59
DDX56-202ENST00000415758 ODF3L2Q3SX64 289 aa11.38□□□□□ -0.59
DDX56-202ENST00000415758 MFSD4AQ8N468 514 aa11.38□□□□□ -0.59
DDX56-202ENST00000415758 DCSTAMPQ9H295 470 aa11.38□□□□□ -0.59
DDX56-202ENST00000415758 DUSP21Q9H596 190 aa11.38□□□□□ -0.59
DDX56-202ENST00000415758 MAP6D1Q9H9H5 199 aa11.38□□□□□ -0.59
DDX56-202ENST00000415758 BET1LQ9NYM9 111 aa11.38□□□□□ -0.59
DDX56-202ENST00000415758 ELF5Q9UKW6 265 aaPredicted RBP11.38□□□□□ -0.59
DDX56-202ENST00000415758 TRAV1-2A0A0B4J238 106 aa11.37□□□□□ -0.59
DDX56-202ENST00000415758 HLA-GP17693 338 aa11.37□□□□□ -0.59
DDX56-202ENST00000415758 GPR183P32249 361 aa11.37□□□□□ -0.59
DDX56-202ENST00000415758 PLET1Q6UQ28 207 aa11.37□□□□□ -0.59
DDX56-202ENST00000415758 ZNF66Q6ZN08 573 aa11.37□□□□□ -0.59
DDX56-202ENST00000415758 OR4A5Q8NH83 315 aa11.37□□□□□ -0.59
DDX56-202ENST00000415758 TCTEX1D2Q8WW35 142 aa11.37□□□□□ -0.59
DDX56-202ENST00000415758 GALNT14Q96FL9 552 aa11.37□□□□□ -0.59
DDX56-202ENST00000415758 UBQLN2Q9UHD9 624 aa11.37□□□□□ -0.59
DDX56-202ENST00000415758 SPATA2Q9UM82 520 aa11.37□□□□□ -0.59
DDX56-202ENST00000415758 PDCD5O14737 125 aa11.36□□□□□ -0.59
DDX56-202ENST00000415758 REG1AP05451 166 aa11.36□□□□□ -0.59
DDX56-202ENST00000415758 CRHBPP24387 322 aa11.36□□□□□ -0.59
DDX56-202ENST00000415758 OR10A3P58181 314 aa11.36□□□□□ -0.59
DDX56-202ENST00000415758 OR2B8PP59922 312 aa11.36□□□□□ -0.59
DDX56-202ENST00000415758 RCN1Q15293 331 aa11.36□□□□□ -0.59
DDX56-202ENST00000415758 LAMTOR1Q6IAA8 161 aa11.36□□□□□ -0.59
DDX56-202ENST00000415758 CNIH2Q6PI25 160 aa11.36□□□□□ -0.59
DDX56-202ENST00000415758 TMEM190Q8WZ59 177 aa11.36□□□□□ -0.59
DDX56-202ENST00000415758 MGLLQ99685 303 aa11.36□□□□□ -0.59
DDX56-202ENST00000415758 SRSF8Q9BRL6 282 aaKnown RBP11.36□□□□□ -0.59
DDX56-202ENST00000415758 AIFM2Q9BRQ8 373 aa11.36□□□□□ -0.59
DDX56-202ENST00000415758 DAZ1Q9NQZ3 744 aaKnown RBP11.36□□□□□ -0.59
DDX56-202ENST00000415758 THYN1Q9P016 225 aa11.36□□□□□ -0.59
DDX56-202ENST00000415758 TPRKBQ9Y3C4 175 aa11.36□□□□□ -0.59
DDX56-202ENST00000415758 KIAA1109Q2LD37 5005 aa11.35□□□□□ -0.59
DDX56-202ENST00000415758 IGHV3-35A0A0C4DH35 117 aa11.35□□□□□ -0.59
DDX56-202ENST00000415758 IGLC7A0M8Q6 106 aa11.35□□□□□ -0.59
DDX56-202ENST00000415758 FGF2P09038 288 aa11.35□□□□□ -0.59
DDX56-202ENST00000415758 MSMO1Q15800 293 aa11.35□□□□□ -0.59
DDX56-202ENST00000415758 TIMM50Q3ZCQ8 353 aa11.35□□□□□ -0.59
DDX56-202ENST00000415758 CDNFQ49AH0 187 aa11.35□□□□□ -0.59
DDX56-202ENST00000415758 HACD4Q5VWC8 232 aa11.35□□□□□ -0.59
DDX56-202ENST00000415758 SSX9Q7RTT3 188 aa11.35□□□□□ -0.59
DDX56-202ENST00000415758 VN1R17PQ8TDU5 208 aa11.35□□□□□ -0.59
DDX56-202ENST00000415758 OR4C46A6NHA9 309 aa11.34□□□□□ -0.59
DDX56-202ENST00000415758 TGOLN2O43493 480 aa11.34□□□□□ -0.59
DDX56-202ENST00000415758 POU2AF1Q16633 256 aa11.34□□□□□ -0.59
DDX56-202ENST00000415758 GATAD1Q8WUU5 269 aa11.34□□□□□ -0.59
DDX56-202ENST00000415758 ATP6V0BQ99437 205 aa11.34□□□□□ -0.59
DDX56-202ENST00000415758 ATG5Q9H1Y0 275 aa11.34□□□□□ -0.59
DDX56-202ENST00000415758 TAS2R8Q9NYW2 309 aa11.34□□□□□ -0.59
DDX56-202ENST00000415758 VPS13DQ5THJ4 4388 aa11.33□□□□□ -0.6
DDX56-202ENST00000415758 K7EMT4 169 aa11.33□□□□□ -0.6
DDX56-202ENST00000415758 EBAG9O00559 213 aa11.33□□□□□ -0.6
DDX56-202ENST00000415758 RBFOX2O43251 390 aaKnown RBP eCLIP11.33□□□□□ -0.67e-8■□□□□ 9
DDX56-202ENST00000415758 RGS10O43665 173 aa11.33□□□□□ -0.6
DDX56-202ENST00000415758 S1PR2O95136 353 aa11.33□□□□□ -0.6
DDX56-202ENST00000415758 RPL35AP18077 110 aaKnown RBP11.33□□□□□ -0.6
DDX56-202ENST00000415758 RAB3BP20337 219 aa11.33□□□□□ -0.6
DDX56-202ENST00000415758 TCTAP57738 103 aa11.33□□□□□ -0.6
DDX56-202ENST00000415758 SPSB3Q6PJ21 355 aa11.33□□□□□ -0.6
DDX56-202ENST00000415758 MFFQ9GZY8 342 aa11.33□□□□□ -0.6
DDX56-202ENST00000415758 VCXQ9H320 206 aa11.33□□□□□ -0.6
DDX56-202ENST00000415758 ANXA10Q9UJ72 324 aa11.33□□□□□ -0.6
DDX56-202ENST00000415758 NDUFA4O00483 81 aa11.32□□□□□ -0.6
DDX56-202ENST00000415758 CYB5BO43169 146 aa11.32□□□□□ -0.6
DDX56-202ENST00000415758 FCGR2BP31994 310 aaPredicted RBP11.32□□□□□ -0.6
DDX56-202ENST00000415758 TAS2R31P59538 309 aa11.32□□□□□ -0.6
DDX56-202ENST00000415758 PRR20EP86478 221 aa11.32□□□□□ -0.6
DDX56-202ENST00000415758 PRR20CP86479 221 aa11.32□□□□□ -0.6
DDX56-202ENST00000415758 PRR20DP86480 221 aa11.32□□□□□ -0.6
DDX56-202ENST00000415758 PRR20BP86481 221 aa11.32□□□□□ -0.6
DDX56-202ENST00000415758 PRR20AP86496 221 aa11.32□□□□□ -0.6
DDX56-202ENST00000415758 PRSS48Q7RTY5 328 aa11.32□□□□□ -0.6
DDX56-202ENST00000415758 BSCL2Q96G97 398 aaPredicted RBP11.32□□□□□ -0.6
DDX56-202ENST00000415758 GPHA2Q96T91 129 aa11.32□□□□□ -0.6
DDX56-202ENST00000415758 C6orf62Q9GZU0 229 aaPredicted RBP11.32□□□□□ -0.6
DDX56-202ENST00000415758 CSTL1Q9H114 145 aa11.32□□□□□ -0.6
DDX56-202ENST00000415758 C11orf68Q9H3H3 251 aaKnown RBP11.32□□□□□ -0.6
DDX56-202ENST00000415758 HRASLSQ9HDD0 168 aa11.32□□□□□ -0.6
DDX56-202ENST00000415758 UPK2O00526 184 aa11.31□□□□□ -0.6
DDX56-202ENST00000415758 HPRT1P00492 218 aa11.31□□□□□ -0.6
DDX56-202ENST00000415758 RPA2P15927 270 aa11.31□□□□□ -0.6
DDX56-202ENST00000415758 CMC4P56277 68 aaPredicted RBP11.31□□□□□ -0.6
DDX56-202ENST00000415758 THOC7Q6I9Y2 204 aaKnown RBP11.31□□□□□ -0.6
DDX56-202ENST00000415758 NR2C2APQ86WQ0 139 aa11.31□□□□□ -0.6
DDX56-202ENST00000415758 SPAG16Q8N0X2 631 aa11.31□□□□□ -0.6
DDX56-202ENST00000415758 GDPD1Q8N9F7 314 aa11.31□□□□□ -0.6
DDX56-202ENST00000415758 ZBTB34Q8NCN2 500 aa11.31□□□□□ -0.6
DDX56-202ENST00000415758 C11orf45Q8TAV5 145 aa11.31□□□□□ -0.6
DDX56-202ENST00000415758 NUDCD2Q8WVJ2 157 aa11.31□□□□□ -0.6
DDX56-202ENST00000415758 RARRES2Q99969 163 aa11.31□□□□□ -0.6
DDX56-202ENST00000415758 COMMD5Q9GZQ3 224 aa11.31□□□□□ -0.6
DDX56-202ENST00000415758 TRAV3A0A0B4J244 114 aa11.3□□□□□ -0.6
DDX56-202ENST00000415758 TRDV1A0A1B0GX56 115 aa11.3□□□□□ -0.6
DDX56-202ENST00000415758 OR2T8A6NH00 312 aa11.3□□□□□ -0.6
DDX56-202ENST00000415758 MPTX1A8MV57 137 aa11.3□□□□□ -0.6
DDX56-202ENST00000415758 SSX5O60225 188 aa11.3□□□□□ -0.6
DDX56-202ENST00000415758 IFNA4P05014 189 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms