RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 SNF8Q96H20 258 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 TMEM141Q96I45 108 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 PANX3Q96QZ0 392 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR5B12Q96R08 314 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 GPX7Q96SL4 187 aaPredicted RBP-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 CHP1Q99653 195 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 MICU1Q9BPX6 476 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 PARD6BQ9BYG5 372 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 SPATC1LQ9H0A9 340 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 ZWILCHQ9H900 591 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 CDH20Q9HBT6 801 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 RIC8AQ9NPQ8 531 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 IDI2-AS1Q9NZ38 188 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 LARSQ9P2J5 1176 aaKnown RBP-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 NAT8Q9UHE5 227 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 COPS3Q9UNS2 423 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 TMEM131LA2VDJ0 1609 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 NUP155O75694 1391 aa-2.5□□□□□ -2.81
RNU4-88P-201ENST00000411220 IFT172Q9UG01 1749 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 CHD2O14647 1828 aaKnown RBP-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 CCDC88AQ3V6T2 1871 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 CCDC196A0A1B0GTZ2 297 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 ATP6AP2A0A1C7CYW4 349 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 BICDL2A1A5D9 508 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 ANKRD62A6NC57 917 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 C5orf51A6NDU8 294 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 LYRM9A8MSI8 78 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 TMEM114B3SHH9 223 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 H3BMQ9 156 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 I3L3M4 83 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 SH2D1BO14796 132 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 DNPH1O43598 174 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR7A10O76100 309 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 APOMO95445 188 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 GYPBP06028 91 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 ANXA2P07355 339 aaKnown RBP-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 C8orf89P0DMQ9 161 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 CXCL8P10145 99 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 CALB2P22676 271 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 MSNP26038 577 aaKnown RBP-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 GABRB3P28472 473 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 RAB9AP51151 201 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 ADKP55263 362 aaKnown RBP-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 BPIFB3P59826 476 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 GRB2P62993 217 aaKnown RBP-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 HERV-K104P63124 156 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 EIF5AP63241 154 aaKnown RBP-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 RPP38P78345 283 aaKnown RBP-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 CCZ1BP86790 482 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 CCZ1P86791 482 aaPredicted RBP-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 KDSRQ06136 332 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 FGL1Q08830 312 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 GPR176Q14439 515 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR1Q1Q15612 314 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 MAPRE1Q15691 268 aaKnown RBP-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 UBE2V2Q15819 145 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 GALNTL6Q49A17 601 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 RNASEH2BQ5TBB1 312 aaKnown RBP-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 NKAIN2Q5VXU1 208 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 TMEM215Q68D42 235 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 LPCAT3Q6P1A2 487 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 CYP4V2Q6ZWL3 525 aaPredicted RBP-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 RAB43Q86YS6 212 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 C15orf54Q8N8G6 183 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 MFSD9Q8NBP5 474 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 OR10R2Q8NGX6 335 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 STYXQ8WUJ0 223 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 LRRC29Q8WV35 223 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 TEKT4Q8WW24 435 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 GGHQ92820 318 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 CIDECQ96AQ7 238 aaPredicted RBP-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 SLC25A36Q96CQ1 311 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 TCHPQ9BT92 498 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 ACPTQ9BZG2 426 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 CCDC113Q9H0I3 377 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 METTL9Q9H1A3 318 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 TAOK3Q9H2K8 898 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 TMEM9BQ9NQ34 198 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 TAS2R13Q9NYV9 303 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 ADA2Q9NZK5 511 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 GALPQ9UBC7 116 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 RUVBL2Q9Y230 463 aaKnown RBP-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 ALG5Q9Y673 324 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 KIF21BO75037 1637 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 RAD50Q92878 1312 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 TOGARAM1Q9Y4F4 1720 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 SCN11AQ9UI33 1791 aa-2.51□□□□□ -2.81
RNU4-88P-201ENST00000411220 A0A1W2PPV9 198 aa-2.52□□□□□ -2.81
RNU4-88P-201ENST00000411220 hCG_1642624A0A1W2PR95 340 aa-2.52□□□□□ -2.81
RNU4-88P-201ENST00000411220 RBAKDNA6NC62 111 aa-2.52□□□□□ -2.81
RNU4-88P-201ENST00000411220 TRIM64CA6NLI5 447 aa-2.52□□□□□ -2.81
RNU4-88P-201ENST00000411220 DEGS1O15121 323 aa-2.52□□□□□ -2.81
RNU4-88P-201ENST00000411220 ARPC5O15511 151 aa-2.52□□□□□ -2.81
RNU4-88P-201ENST00000411220 DHRS3O75911 302 aa-2.52□□□□□ -2.81
RNU4-88P-201ENST00000411220 DIRAS3O95661 229 aa-2.52□□□□□ -2.81
RNU4-88P-201ENST00000411220 FGFR1OPO95684 399 aaKnown RBP-2.52□□□□□ -2.81
RNU4-88P-201ENST00000411220 DHFRP00374 187 aa-2.52□□□□□ -2.81
RNU4-88P-201ENST00000411220 IFNB1P01574 187 aa-2.52□□□□□ -2.81
RNU4-88P-201ENST00000411220 GSTA2P09210 222 aa-2.52□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms