RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 TICRRQ7Z2Z1 1910 aa11.87□□□□□ -0.51
ITGA6-202ENST00000409080 PTBP3O95758 552 aaKnown RBP11.87□□□□□ -0.51
ITGA6-202ENST00000409080 RPL13AP40429 203 aaKnown RBP11.87□□□□□ -0.51
ITGA6-202ENST00000409080 GAS1P54826 345 aa11.87□□□□□ -0.51
ITGA6-202ENST00000409080 ZNF343Q6P1L6 599 aa11.87□□□□□ -0.51
ITGA6-202ENST00000409080 GPR61Q9BZJ8 451 aa11.87□□□□□ -0.51
ITGA6-202ENST00000409080 LY6G6EA0A0G2JKS1 128 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 CGB1A6NKQ9 187 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 SRRM5B3KS81 715 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 EFNA2O43921 213 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 CLPSP04118 112 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 CXCL3P19876 107 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 HIST1H1AQ02539 215 aaPredicted RBP11.86□□□□□ -0.51
ITGA6-202ENST00000409080 CLDND2Q8NHS1 167 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 C5orf66Q9H5L9 145 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 U3KQA8 63 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 ARHGEF17Q96PE2 2063 aaPredicted RBP11.86□□□□□ -0.51
ITGA6-202ENST00000409080 CA2P00918 260 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 FAM159AQ6UWV7 190 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 TMEM178BH3BS89 294 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 TWIST1Q15672 202 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 C19orf54Q5BKX5 351 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 FAM53AQ6NSI3 398 aaPredicted RBP11.86□□□□□ -0.51
ITGA6-202ENST00000409080 MYOZ3Q8TDC0 251 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 RALGAPA1Q6GYQ0 2036 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 COL4A6Q14031 1691 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 M0R1W7 72 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 GPR183P32249 361 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 TEX45Q8NA69 505 aa11.86□□□□□ -0.51
ITGA6-202ENST00000409080 ITLN2Q8WWU7 325 aaPredicted RBP11.86□□□□□ -0.51
ITGA6-202ENST00000409080 BCL2P10415 239 aa11.85□□□□□ -0.51
ITGA6-202ENST00000409080 CD69Q07108 199 aa11.85□□□□□ -0.51
ITGA6-202ENST00000409080 SAPCD1Q5SSQ6 148 aa11.85□□□□□ -0.51
ITGA6-202ENST00000409080 WDR25Q64LD2 544 aaPredicted RBP11.85□□□□□ -0.51
ITGA6-202ENST00000409080 CYP2G1PQ6ZSU1 146 aa11.85□□□□□ -0.51
ITGA6-202ENST00000409080 OR11H7Q8NGC8 314 aa11.85□□□□□ -0.51
ITGA6-202ENST00000409080 CACNG8Q8WXS5 425 aa11.85□□□□□ -0.51
ITGA6-202ENST00000409080 GPR82Q96P67 336 aa11.85□□□□□ -0.51
ITGA6-202ENST00000409080 FABP4P15090 132 aa11.85□□□□□ -0.51
ITGA6-202ENST00000409080 CLEC19AQ6UXS0 136 aa11.85□□□□□ -0.51
ITGA6-202ENST00000409080 MARVELD3Q96A59 401 aa11.85□□□□□ -0.51
ITGA6-202ENST00000409080 INTS1Q8N201 2190 aaKnown RBP11.85□□□□□ -0.51
ITGA6-202ENST00000409080 PLPPR1Q8TBJ4 325 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 NABP2Q9BQ15 211 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 A6NNC1 897 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 CSN3P07498 182 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 ANOS1P23352 680 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 B3GALT5-AS1P59052 145 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 ZNF497Q6ZNH5 498 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 GTSCR1Q86UQ5 136 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 SAA2-SAA4A0A096LPE2 208 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 TRGC1P0CF51 173 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 SAA2P0DJI9 122 aaPredicted RBP11.84□□□□□ -0.51
ITGA6-202ENST00000409080 IGFBP3P17936 291 aaPredicted RBP11.84□□□□□ -0.51
ITGA6-202ENST00000409080 TMEM155Q4W5P6 130 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 RSG1Q9BU20 258 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 A0A0B4J293 547 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 MSGN1A6NI15 193 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 RUNX1Q01196 453 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 VMO1Q7Z5L0 202 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 FBLN5Q9UBX5 448 aa11.84□□□□□ -0.51
ITGA6-202ENST00000409080 FOXA2Q9Y261 457 aaPredicted RBP11.84□□□□□ -0.51
ITGA6-202ENST00000409080 TRBV6-7A0A0A0MS04 114 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 MORN2Q502X0 79 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 WNT10AQ9GZT5 417 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 SNURFLB1AK76 121 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 TMEM88Q6PEY1 159 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 LRP11Q86VZ4 500 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 NABP1Q96AH0 204 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 IGHV3-35A0A0C4DH35 117 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 RBFOX2O43251 390 aaKnown RBP eCLIP11.83□□□□□ -0.52
ITGA6-202ENST00000409080 C3orf36Q3SXR2 165 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 Q5PR19 223 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 MRPL54Q6P161 138 aaKnown RBP11.83□□□□□ -0.52
ITGA6-202ENST00000409080 ZNF474Q6S9Z5 364 aaPredicted RBP11.83□□□□□ -0.52
ITGA6-202ENST00000409080 IGF2-ASQ6U949 168 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 C2CD4CQ8TF44 421 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 ST6GAL2Q96JF0 529 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 OR5AC2Q9NZP5 309 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 PI4KAP42356 2102 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 RGP1Q92546 391 aaPredicted RBP11.83□□□□□ -0.52
ITGA6-202ENST00000409080 GPHA2Q96T91 129 aa11.83□□□□□ -0.52
ITGA6-202ENST00000409080 C17orf98A8MV24 154 aa11.82□□□□□ -0.52
ITGA6-202ENST00000409080 ZNF253O75346 499 aa11.82□□□□□ -0.52
ITGA6-202ENST00000409080 UCP1P25874 307 aa11.82□□□□□ -0.52
ITGA6-202ENST00000409080 LHFPL5Q8TAF8 219 aa11.82□□□□□ -0.52
ITGA6-202ENST00000409080 PSMB11A5LHX3 300 aa11.82□□□□□ -0.52
ITGA6-202ENST00000409080 IGHV3-11P01762 117 aa11.82□□□□□ -0.52
ITGA6-202ENST00000409080 NSUN5P1Q3KNT7 163 aa11.82□□□□□ -0.52
ITGA6-202ENST00000409080 FGFBP3Q8TAT2 258 aa11.82□□□□□ -0.52
ITGA6-202ENST00000409080 SRSF12Q8WXF0 261 aaKnown RBP11.82□□□□□ -0.52
ITGA6-202ENST00000409080 LYZL4Q96KX0 146 aa11.82□□□□□ -0.52
ITGA6-202ENST00000409080 RNF5Q99942 180 aa11.82□□□□□ -0.52
ITGA6-202ENST00000409080 UPK2O00526 184 aa11.82□□□□□ -0.52
ITGA6-202ENST00000409080 PRR30Q53SZ7 412 aaPredicted RBP11.82□□□□□ -0.52
ITGA6-202ENST00000409080 TBL2Q9Y4P3 447 aaKnown RBP11.82□□□□□ -0.52
ITGA6-202ENST00000409080 RNF114Q9Y508 228 aa11.82□□□□□ -0.52
ITGA6-202ENST00000409080 OR4C46A6NHA9 309 aa11.82□□□□□ -0.52
ITGA6-202ENST00000409080 TIMM23O14925 209 aa11.82□□□□□ -0.52
ITGA6-202ENST00000409080 IGKV3-15P01624 115 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms