RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 MRPL41Q8IXM3 137 aaKnown RBP7.92□□□□□ -1.14
POLR1A-202ENST00000409024 OR1S2Q8NGQ3 325 aa7.92□□□□□ -1.14
POLR1A-202ENST00000409024 NRGNQ92686 78 aa7.92□□□□□ -1.14
POLR1A-202ENST00000409024 PINX1Q96BK5 328 aaKnown RBP7.92□□□□□ -1.14
POLR1A-202ENST00000409024 MALSU1Q96EH3 234 aa7.92□□□□□ -1.14
POLR1A-202ENST00000409024 SMR3AQ99954 134 aa7.92□□□□□ -1.14
POLR1A-202ENST00000409024 GINS3Q9BRX5 216 aa7.92□□□□□ -1.14
POLR1A-202ENST00000409024 MS4A7Q9GZW8 240 aaPredicted RBP7.92□□□□□ -1.14
POLR1A-202ENST00000409024 MED9Q9NWA0 146 aa7.92□□□□□ -1.14
POLR1A-202ENST00000409024 ZNRD1Q9P1U0 126 aa7.92□□□□□ -1.14
POLR1A-202ENST00000409024 NUP50Q9UKX7 468 aa7.92□□□□□ -1.14
POLR1A-202ENST00000409024 STRAPQ9Y3F4 350 aaKnown RBP7.92□□□□□ -1.14
POLR1A-202ENST00000409024 MALRD1Q5VYJ5 2156 aa7.92□□□□□ -1.14
POLR1A-202ENST00000409024 YLPM1P49750 1951 aaKnown RBP7.91□□□□□ -1.14
POLR1A-202ENST00000409024 DOCK11Q5JSL3 2073 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 HIVEP2P31629 2446 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 IGHV4-61A0A0C4DH41 118 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 IGSF23A1L1A6 192 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 LINC00862A6NCI5 91 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 B4DSR2 109 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 KCNAB3O43448 404 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 TSPAN9O75954 239 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 OR8U8P0C7N1 319 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 COX7A1P24310 79 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 HTR2BP41595 481 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 VDAC2P45880 294 aaPredicted RBP7.91□□□□□ -1.14
POLR1A-202ENST00000409024 RAB5CP51148 216 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 NHLH2Q02577 135 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 CLEC12BQ2HXU8 276 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 DEFB113Q30KQ7 82 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 CLEC9AQ6UXN8 241 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 SSX9Q7RTT3 188 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 MOB3BQ86TA1 216 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 OR1L8Q8NGR8 309 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 RNF141Q8WVD5 230 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 GNPNAT1Q96EK6 184 aaPredicted RBP7.91□□□□□ -1.14
POLR1A-202ENST00000409024 PERPQ96FX8 193 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 ATP5SQ99766 215 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 GGACTQ9BVM4 153 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 QTRT1Q9BXR0 403 aaKnown RBP7.91□□□□□ -1.14
POLR1A-202ENST00000409024 ENY2Q9NPA8 101 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 TCF19Q9Y242 345 aa7.91□□□□□ -1.14
POLR1A-202ENST00000409024 IGHV4-30-2A0A087WSY4 118 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 TRAV20A0A0B4J274 112 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 A0A1W2PN81 502 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 A0A1W2PPI3 338 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 SRRM4A7MD48 611 aaKnown RBP7.9□□□□□ -1.14
POLR1A-202ENST00000409024 RNASEK-C17orf49H0YIS7 233 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 IFNA5P01569 189 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 IGLV2-23P01705 113 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 SAA1P0DJI8 122 aaPredicted RBP7.9□□□□□ -1.14
POLR1A-202ENST00000409024 IAPPP10997 89 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 CHRNA7P36544 502 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 REG1BP48304 166 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 RAB11AP62491 216 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 RPL8P62917 257 aaKnown RBP7.9□□□□□ -1.14
POLR1A-202ENST00000409024 PRCDQ00LT1 54 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 LOXL1Q08397 574 aaPredicted RBP7.9□□□□□ -1.14
POLR1A-202ENST00000409024 SPANXN5Q5MJ07 72 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 RPL7L1Q6DKI1 246 aaKnown RBP7.9□□□□□ -1.14
POLR1A-202ENST00000409024 ALKAL2Q6UX46 152 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 THNSL2Q86YJ6 484 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 PDZD9Q8IXQ8 264 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 MMD2Q8IY49 270 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 OR10P1Q8NGE3 313 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 OR5C1Q8NGR4 320 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 SAT2Q96F10 170 aaPredicted RBP7.9□□□□□ -1.14
POLR1A-202ENST00000409024 TBX15Q96SF7 602 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 SRSF8Q9BRL6 282 aaKnown RBP7.9□□□□□ -1.14
POLR1A-202ENST00000409024 SIRT7Q9NRC8 400 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 MMP26Q9NRE1 261 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 OR51B2Q9Y5P1 312 aa7.9□□□□□ -1.14
POLR1A-202ENST00000409024 USF3Q68DE3 2245 aa7.9□□□□□ -1.15
POLR1A-202ENST00000409024 RPS10-NUDT3A0A1W2PQS6 291 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 NUDT19A8MXV4 375 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 FAM157AC9JC47 383 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 FNDC10F2Z333 226 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 SOX15O60248 233 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 NXPH3O95157 252 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 MOSP00540 346 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 CRYGBP07316 175 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 MSMBP08118 114 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 SPP1P10451 314 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 COMPP49747 757 aaPredicted RBP7.89□□□□□ -1.15
POLR1A-202ENST00000409024 DYNLT3P51808 116 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 F2RL1P55085 397 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 BPIFB3P59826 476 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 EBI3Q14213 229 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 DIAPH2-AS1Q14236 149 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 HSD17B13Q7Z5P4 300 aaPredicted RBP7.89□□□□□ -1.15
POLR1A-202ENST00000409024 VKORC1L1Q8N0U8 176 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 NPBQ8NG41 125 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 COMMD5Q9GZQ3 224 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 PLEKHA3Q9HB20 300 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 HEYLQ9NQ87 328 aaPredicted RBP7.89□□□□□ -1.15
POLR1A-202ENST00000409024 AUP1Q9Y679 476 aa7.89□□□□□ -1.15
POLR1A-202ENST00000409024 HRNRQ86YZ3 2850 aaPredicted RBP7.89□□□□□ -1.15
POLR1A-202ENST00000409024 TRAV3A0A0B4J244 114 aa7.88□□□□□ -1.15
POLR1A-202ENST00000409024 TEX50A0A1B0GTY4 177 aa7.88□□□□□ -1.15
POLR1A-202ENST00000409024 PMS2P5A8MQ11 134 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms