RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 TMEM140Q9NV12 185 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 FKBP11Q9NYL4 201 aa6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 TECRQ9NZ01 308 aaKnown RBP6.94□□□□□ -1.3
SNORD88A-201ENST00000408314 MEIS3P1A6NDR6 274 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 MARCH11A6NNE9 402 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 C3orf84H3BNL1 204 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 LGALS9O00182 355 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 BMPR1BO00238 502 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 UPK2O00526 184 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 SNAPC5O75971 98 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 PRH1P02810 166 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 RLN1P04808 185 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 FCER2P06734 321 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 IL6RP08887 468 aaPredicted RBP6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 PTHLHP12272 177 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 CTRB1P17538 263 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 ARL3P36405 182 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 ZNF45Q02386 682 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 KLK9Q2XQG4 91 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 CTRB2Q6GPI1 263 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 OR1L8Q8NGR8 309 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 RCHY1Q96PM5 261 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 TUBA4BQ9H853 241 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 PALMDQ9NP74 551 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 SLC2A8Q9NY64 477 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 COMMD3Q9UBI1 195 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 KLK9Q9UKQ9 250 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 PRNDQ9UKY0 176 aa6.93□□□□□ -1.3
SNORD88A-201ENST00000408314 STAB2Q8WWQ8 2551 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 FAM25AB3EWG3 89 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 FAM25CB3EWG5 89 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 FAM25GB3EWG6 89 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 PGLYRP1O75594 196 aaPredicted RBP6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 S1PR2O95136 353 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 TRBV12-3P01733 135 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 PMP2P02689 132 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 IFNA6P05013 189 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 CSN3P07498 182 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 TRAPPC2P0DI81 140 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 TRAPPC2BP0DI82 140 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 IGHV4-30-4P0DP06 118 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 AREGP15514 252 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 TBPP20226 339 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 GNRHRP30968 328 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 HRH1P35367 487 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 TGFBR1P36897 503 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 BRWD1-AS2P59051 145 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 OR2B8PP59922 312 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 VBP1P61758 197 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 NCS1P62166 190 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 DEFA5Q01523 94 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 IL34Q6ZMJ4 242 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 GPHB5Q86YW7 130 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 SLC38A6Q8IZM9 456 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 OR5B3Q8NH48 314 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 GPX8Q8TED1 209 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 LSM10Q969L4 123 aaKnown RBP6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 MARC2Q969Z3 335 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 DGCR14Q96DF8 476 aaKnown RBP6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 TMEM56Q96MV1 263 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 ATP6V0BQ99437 205 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 SPATA25Q9BR10 227 aa6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 GAR1Q9NY12 217 aaKnown RBP6.92□□□□□ -1.3
SNORD88A-201ENST00000408314 IGLV11-55A0A075B6I3 123 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 A8MWP6 167 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 ATG12O94817 140 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 GABARAPO95166 117 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 EIF4EP06730 217 aaKnown RBP6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 HLA-DMAP28067 261 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 RFX2P48378 723 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 UCP3P55916 312 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 ANKRD55Q3KP44 614 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 RNASE10Q5GAN6 216 aaKnown RBP6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 CLEC19AQ6UXS0 136 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 SLC16A13Q7RTY0 426 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 HAPLN4Q86UW8 402 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 SNX29P2Q8IUI4 249 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 SBSPONQ8IVN8 264 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 GDPD1Q8N9F7 314 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 VN1R17PQ8TDU5 208 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 ZNF486Q96H40 463 aaPredicted RBP6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 GPHA2Q96T91 129 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 FXYD6Q9H0Q3 95 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 RABL2AQ9UBK7 228 aaPredicted RBP6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 RABL2BQ9UNT1 228 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 UFC1Q9Y3C8 167 aa6.91□□□□□ -1.3
SNORD88A-201ENST00000408314 IGLC7A0M8Q6 106 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 ZNF320A2RRD8 509 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 C2orf70A6NJV1 201 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 PPP5D1E7EU14 171 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 RBMXL2O75526 392 aaKnown RBP6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 NDUFB8O95169 186 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 SERPINE2P07093 398 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 FOLR2P14207 255 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 MYOD1P15172 320 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 RPA2P15927 270 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 ZNF182P17025 639 aaPredicted RBP6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 PTBP1P26599 531 aaKnown RBP eCLIP6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 LPAR6P43657 344 aa6.9□□□□□ -1.3
SNORD88A-201ENST00000408314 MECP2P51608 486 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms