RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 PRSS3P35030 304 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 OR2B8PP59922 312 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 POU2AF1Q16633 256 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 LYSMD2Q8IV50 215 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 SGPP2Q8IWX5 399 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 MOB3AQ96BX8 217 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 CCDC140Q96MF4 163 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 COMMD3Q9UBI1 195 aa14.63□□□□□ -0.07
SMARCB1-204ENST00000407422 OR2C1O95371 312 aa14.62□□□□□ -0.07
SMARCB1-204ENST00000407422 RLN1P04808 185 aa14.62□□□□□ -0.07
SMARCB1-204ENST00000407422 LCN12Q6JVE5 192 aa14.62□□□□□ -0.07
SMARCB1-204ENST00000407422 CLEC19AQ6UXS0 136 aa14.62□□□□□ -0.07
SMARCB1-204ENST00000407422 OR5H2Q8NGV7 314 aa14.62□□□□□ -0.07
SMARCB1-204ENST00000407422 KCTD12Q96CX2 325 aaKnown RBP14.62□□□□□ -0.07
SMARCB1-204ENST00000407422 PLEKHA2Q9HB19 425 aa14.62□□□□□ -0.07
SMARCB1-204ENST00000407422 TMEM140Q9NV12 185 aa14.62□□□□□ -0.07
SMARCB1-204ENST00000407422 A8MZ25 164 aa14.61□□□□□ -0.07
SMARCB1-204ENST00000407422 PGLYRP1O75594 196 aaPredicted RBP14.61□□□□□ -0.07
SMARCB1-204ENST00000407422 HLA-DMAP28067 261 aa14.61□□□□□ -0.07
SMARCB1-204ENST00000407422 TAS2R46P59540 309 aa14.61□□□□□ -0.07
SMARCB1-204ENST00000407422 KLK9Q2XQG4 91 aa14.61□□□□□ -0.07
SMARCB1-204ENST00000407422 Q8N402 240 aa14.61□□□□□ -0.07
SMARCB1-204ENST00000407422 DMBX1Q8NFW5 382 aa14.61□□□□□ -0.07
SMARCB1-204ENST00000407422 ZMAT4Q9H898 229 aa14.61□□□□□ -0.07
SMARCB1-204ENST00000407422 KLK9Q9UKQ9 250 aa14.61□□□□□ -0.07
SMARCB1-204ENST00000407422 CSMD3Q7Z407 3707 aa14.6□□□□□ -0.07
SMARCB1-204ENST00000407422 IGLV11-55A0A075B6I3 123 aa14.6□□□□□ -0.07
SMARCB1-204ENST00000407422 IGLC7A0M8Q6 106 aa14.6□□□□□ -0.07
SMARCB1-204ENST00000407422 GGCTO75223 188 aaKnown RBP14.6□□□□□ -0.07
SMARCB1-204ENST00000407422 DHFRP00374 187 aa14.6□□□□□ -0.07
SMARCB1-204ENST00000407422 DEFA4P12838 97 aa14.6□□□□□ -0.07
SMARCB1-204ENST00000407422 HRH1P35367 487 aa14.6□□□□□ -0.07
SMARCB1-204ENST00000407422 CD300EQ496F6 205 aaPredicted RBP14.6□□□□□ -0.07
SMARCB1-204ENST00000407422 CD300LFQ8TDQ1 290 aa14.6□□□□□ -0.07
SMARCB1-204ENST00000407422 TM2D3Q9BRN9 247 aa14.6□□□□□ -0.07
SMARCB1-204ENST00000407422 FXYD6Q9H0Q3 95 aa14.6□□□□□ -0.07
SMARCB1-204ENST00000407422 BATF3Q9NR55 127 aa14.6□□□□□ -0.07
SMARCB1-204ENST00000407422 FAM209BQ5JX69 171 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 GTSCR1Q86UQ5 136 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 OR10W1Q8NGF6 305 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 GPX8Q8TED1 209 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 BORCS5Q969J3 196 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 COMMD5Q9GZQ3 224 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 MFSD2BA6NFX1 497 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 C2orf70A6NJV1 201 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 APOA1P02647 267 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 ARL3P36405 182 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 SNX29P2Q8IUI4 249 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 OR6F1Q8NGZ6 308 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 FCAMRQ8WWV6 532 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 EEF1AKMT3Q96AZ1 226 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 COMMD9Q9P000 198 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 SELENOKQ9Y6D0 94 aa14.59□□□□□ -0.07
SMARCB1-204ENST00000407422 MARCH11A6NNE9 402 aa14.58□□□□□ -0.08
SMARCB1-204ENST00000407422 HPGDSO60760 199 aa14.58□□□□□ -0.08
SMARCB1-204ENST00000407422 FOLR2P14207 255 aa14.58□□□□□ -0.08
SMARCB1-204ENST00000407422 HIST1H1BP16401 226 aaKnown RBP14.58□□□□□ -0.08
SMARCB1-204ENST00000407422 ELK1P19419 428 aa14.58□□□□□ -0.08
SMARCB1-204ENST00000407422 F2RP25116 425 aa14.58□□□□□ -0.08
SMARCB1-204ENST00000407422 DEFB114Q30KQ6 69 aa14.58□□□□□ -0.08
SMARCB1-204ENST00000407422 DGCR14Q96DF8 476 aaKnown RBP14.58□□□□□ -0.08
SMARCB1-204ENST00000407422 QTRT1Q9BXR0 403 aaKnown RBP14.58□□□□□ -0.08
SMARCB1-204ENST00000407422 NAA50Q9GZZ1 169 aaKnown RBP14.58□□□□□ -0.08
SMARCB1-204ENST00000407422 ZC4H2Q9NQZ6 224 aa14.58□□□□□ -0.08
SMARCB1-204ENST00000407422 SMIM31A0A1B0GVY4 71 aa14.57□□□□□ -0.08
SMARCB1-204ENST00000407422 ZNF785A8K8V0 405 aa14.57□□□□□ -0.08
SMARCB1-204ENST00000407422 C3orf84H3BNL1 204 aa14.57□□□□□ -0.08
SMARCB1-204ENST00000407422 LPAR6P43657 344 aa14.57□□□□□ -0.08
SMARCB1-204ENST00000407422 ZNF585BQ52M93 769 aa14.57□□□□□ -0.08
SMARCB1-204ENST00000407422 GPHB5Q86YW7 130 aa14.57□□□□□ -0.08
SMARCB1-204ENST00000407422 OR2K2Q8NGT1 345 aa14.57□□□□□ -0.08
SMARCB1-204ENST00000407422 DYNLRB2Q8TF09 96 aa14.57□□□□□ -0.08
SMARCB1-204ENST00000407422 CACNG8Q8WXS5 425 aa14.57□□□□□ -0.08
SMARCB1-204ENST00000407422 DYNC2H1Q8NCM8 4307 aaKnown RBP14.57□□□□□ -0.08
SMARCB1-204ENST00000407422 TEX50A0A1B0GTY4 177 aa14.56□□□□□ -0.08
SMARCB1-204ENST00000407422 LGALS9O00182 355 aa14.56□□□□□ -0.08
SMARCB1-204ENST00000407422 GPR31O00270 319 aa14.56□□□□□ -0.08
SMARCB1-204ENST00000407422 KRASP01116 189 aa14.56□□□□□ -0.08
SMARCB1-204ENST00000407422 CLEC3BP05452 202 aa14.56□□□□□ -0.08
SMARCB1-204ENST00000407422 HAGHQ16775 308 aa14.56□□□□□ -0.08
SMARCB1-204ENST00000407422 PHLDA2Q53GA4 152 aa14.56□□□□□ -0.08
SMARCB1-204ENST00000407422 CMTM1Q8IZ96 169 aa14.56□□□□□ -0.08
SMARCB1-204ENST00000407422 MUC7Q8TAX7 377 aa14.56□□□□□ -0.08
SMARCB1-204ENST00000407422 CMTM3Q96MX0 182 aa14.56□□□□□ -0.08
SMARCB1-204ENST00000407422 NSG2Q9Y328 171 aa14.56□□□□□ -0.08
SMARCB1-204ENST00000407422 ZNF320A2RRD8 509 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 FGF2P09038 288 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 SMIM18P0DKX4 95 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 G6PCP35575 357 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 CD81P60033 236 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 ERVK-16P61578 105 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 WT1-ASQ06250 92 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 SRSF8Q9BRL6 282 aaKnown RBP14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 TUBA4BQ9H853 241 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 PLEKHA3Q9HB20 300 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 SCPEP1Q9HB40 452 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 STARD9Q9P2P6 4700 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 TRBV7-1A0A0A6YYK4 115 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 CD7P09564 240 aa14.55□□□□□ -0.08
SMARCB1-204ENST00000407422 OR13C7P0DN81 318 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms