RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 RGS21Q2M5E4 152 aa12.54□□□□□ -0.4
HMGA1-204ENST00000401473 AWAT1Q58HT5 328 aa12.54□□□□□ -0.4
HMGA1-204ENST00000401473 ARSJQ5FYB0 599 aaPredicted RBP12.54□□□□□ -0.4
HMGA1-204ENST00000401473 NMSQ5H8A3 153 aa12.54□□□□□ -0.4
HMGA1-204ENST00000401473 C10orf99Q6UWK7 81 aa12.54□□□□□ -0.4
HMGA1-204ENST00000401473 MITD1Q8WV92 249 aa12.54□□□□□ -0.4
HMGA1-204ENST00000401473 GPR146Q96CH1 333 aa12.54□□□□□ -0.4
HMGA1-204ENST00000401473 RRNAD1Q96FB5 475 aaKnown RBP12.54□□□□□ -0.4
HMGA1-204ENST00000401473 PARP11Q9NR21 331 aa12.54□□□□□ -0.4
HMGA1-204ENST00000401473 SHPKQ9UHJ6 478 aa12.54□□□□□ -0.4
HMGA1-204ENST00000401473 WSB1Q9Y6I7 421 aa12.54□□□□□ -0.4
HMGA1-204ENST00000401473 MSGN1A6NI15 193 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 KCNAB3O43448 404 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 IL5P05113 134 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 HLA-GP17693 338 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 VDAC1P21796 283 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 GRPEL2Q8TAA5 225 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 ARPC1AQ92747 370 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 TMEM14BQ9NUH8 114 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 HAX1O00165 279 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 AP4M1O00189 453 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 ADAP1O75689 374 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 ACTL6BO94805 426 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 APELAP0DMC3 54 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 OR2B8PP59922 312 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 SRPXP78539 464 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 OXA1LQ15070 435 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 ASPHD1Q5U4P2 390 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 ZNF329Q86UD4 541 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 STPG2Q8N412 459 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 LFNGQ8NES3 379 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 SGMS2Q8NHU3 365 aa12.53□□□□□ -0.4
HMGA1-204ENST00000401473 ZNF431Q8TF32 576 aaPredicted RBP12.53□□□□□ -0.4
HMGA1-204ENST00000401473 SRSF12Q8WXF0 261 aaKnown RBP12.53□□□□□ -0.4
HMGA1-204ENST00000401473 LSM10Q969L4 123 aaKnown RBP12.53□□□□□ -0.4
HMGA1-204ENST00000401473 TEX50A0A1B0GTY4 177 aa12.52□□□□□ -0.41
HMGA1-204ENST00000401473 MPTX1A8MV57 137 aa12.52□□□□□ -0.41
HMGA1-204ENST00000401473 ATG12O94817 140 aa12.52□□□□□ -0.41
HMGA1-204ENST00000401473 HOXB5P09067 269 aa12.52□□□□□ -0.41
HMGA1-204ENST00000401473 C19orf54Q5BKX5 351 aa12.52□□□□□ -0.41
HMGA1-204ENST00000401473 FOXRED2Q8IWF2 684 aa12.52□□□□□ -0.41
HMGA1-204ENST00000401473 WIPF2Q8TF74 440 aaPredicted RBP12.52□□□□□ -0.41
HMGA1-204ENST00000401473 C15orf61A6NNL5 157 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 SNAPC5O75971 98 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 FGF2P09038 288 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 PPIFP30405 207 aaKnown RBP12.51□□□□□ -0.41
HMGA1-204ENST00000401473 MAS1LP35410 378 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 KRTAP10-3P60369 221 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 HIST2H2BDQ6DRA6 164 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 FAM219AQ8IW50 185 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 OR4A16Q8NH70 328 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 COQ8AQ8NI60 647 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 RNASE11Q8TAA1 199 aaKnown RBP12.51□□□□□ -0.41
HMGA1-204ENST00000401473 QTRT1Q9BXR0 403 aaKnown RBP12.51□□□□□ -0.41
HMGA1-204ENST00000401473 HMX3A6NHT5 357 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 TEX22C9J3V5 150 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 SOX15O60248 233 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 CREBL2O60519 120 aaPredicted RBP12.51□□□□□ -0.41
HMGA1-204ENST00000401473 CRIP2P52943 208 aaPredicted RBP12.51□□□□□ -0.41
HMGA1-204ENST00000401473 SRSF4Q08170 494 aaKnown RBP12.51□□□□□ -0.41
HMGA1-204ENST00000401473 AKIRIN2Q53H80 203 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 CENPVQ7Z7K6 275 aaPredicted RBP12.51□□□□□ -0.41
HMGA1-204ENST00000401473 KLHDC1Q8N7A1 406 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 UXS1Q8NBZ7 420 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 OR10W1Q8NGF6 305 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 ABHD5Q8WTS1 349 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 PHB2Q99623 299 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 COMMD5Q9GZQ3 224 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 CACNG5Q9UF02 275 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 FOXA2Q9Y261 457 aaPredicted RBP12.51□□□□□ -0.41
HMGA1-204ENST00000401473 OR51B2Q9Y5P1 312 aa12.51□□□□□ -0.41
HMGA1-204ENST00000401473 A0A1B0GUS0 222 aa12.5□□□□□ -0.41
HMGA1-204ENST00000401473 DHFRP00374 187 aa12.5□□□□□ -0.41
HMGA1-204ENST00000401473 RPL27AP46776 148 aaKnown RBP12.5□□□□□ -0.41
HMGA1-204ENST00000401473 CFHR3Q02985 330 aa12.5□□□□□ -0.41
HMGA1-204ENST00000401473 TATDN3Q17R31 274 aa12.5□□□□□ -0.41
HMGA1-204ENST00000401473 ECSCRQ19T08 205 aa12.5□□□□□ -0.41
HMGA1-204ENST00000401473 GGNBP1Q5YKI7 109 aa12.5□□□□□ -0.41
HMGA1-204ENST00000401473 ZNF429Q86V71 674 aa12.5□□□□□ -0.41
HMGA1-204ENST00000401473 MINDY2Q8NBR6 621 aa12.5□□□□□ -0.41
HMGA1-204ENST00000401473 FYTTD1Q96QD9 318 aaKnown RBP12.5□□□□□ -0.41
HMGA1-204ENST00000401473 NDUFA4L2Q9NRX3 87 aa12.5□□□□□ -0.41
HMGA1-204ENST00000401473 PRNDQ9UKY0 176 aa12.5□□□□□ -0.41
HMGA1-204ENST00000401473 TMED3Q9Y3Q3 217 aa12.5□□□□□ -0.41
HMGA1-204ENST00000401473 TRAV41A0A0B4J266 112 aa12.49□□□□□ -0.41
HMGA1-204ENST00000401473 DUXBA0A1W2PPF3 345 aa12.49□□□□□ -0.41
HMGA1-204ENST00000401473 ST8SIA3O43173 380 aa12.49□□□□□ -0.41
HMGA1-204ENST00000401473 PRAF2O60831 178 aa12.49□□□□□ -0.41
HMGA1-204ENST00000401473 RBMXL2O75526 392 aaKnown RBP12.49□□□□□ -0.41
HMGA1-204ENST00000401473 C2orf68Q2NKX9 166 aa12.49□□□□□ -0.41
HMGA1-204ENST00000401473 C12orf45Q8N5I9 185 aaPredicted RBP12.49□□□□□ -0.41
HMGA1-204ENST00000401473 CHPT1Q8WUD6 406 aa12.49□□□□□ -0.41
HMGA1-204ENST00000401473 ZNF580Q9UK33 172 aa12.49□□□□□ -0.41
HMGA1-204ENST00000401473 HSPE1P61604 102 aaKnown RBP12.48□□□□□ -0.41
HMGA1-204ENST00000401473 AARDQ4LEZ3 155 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 TCTEX1D4Q5JR98 221 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 UNQ5815/PRO19632Q6UWF5 114 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 OR5T1Q8NG75 326 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 OR1L8Q8NGR8 309 aa12.48□□□□□ -0.41
HMGA1-204ENST00000401473 SPIN2AQ99865 258 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms