RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CTRLP40313 264 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 EFNB3Q15768 340 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 TBC1D28Q2M2D7 210 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 DOLPP1Q86YN1 238 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 OR4P4Q8NGL7 312 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 TXN2Q99757 166 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 FAM173AQ9BQD7 235 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 RNASE7Q9H1E1 156 aaKnown RBP11.59□□□□□ -0.55
APOB-202ENST00000399256 ARRDC1-AS1Q9H2J1 176 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 DOCK10Q96BY6 2186 aa11.59□□□□□ -0.55
APOB-202ENST00000399256 SMPD2O60906 423 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 CGAP01215 116 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 ZNF766Q5HY98 468 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 Q6ZN92 141 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 SLC25A40Q8TBP6 338 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 Q8TCH9 128 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 C1orf159Q96HA4 380 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 WNT10AQ9GZT5 417 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 OBP2BQ9NPH6 170 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 B4GALT7Q9UBV7 327 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 ACTL6BO94805 426 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 NDUFB8O95169 186 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 RPP30P78346 268 aaKnown RBP11.58□□□□□ -0.56
APOB-202ENST00000399256 CENPWQ5EE01 88 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 ATOH7Q8N100 152 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 BCL2L2Q92843 193 aaPredicted RBP11.58□□□□□ -0.56
APOB-202ENST00000399256 SFXN3Q9BWM7 321 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 GNB1LQ9BYB4 327 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 TRGV10A0A0A0MS01 117 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 A0A1W2PS18 150 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 PRSS46E5RG02 174 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 TCTEX1D1Q8N7M0 179 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 STPG3Q8N7X2 389 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 KCNS1Q96KK3 526 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 TUBG2Q9NRH3 451 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 SLC45A2Q9UMX9 530 aa11.58□□□□□ -0.56
APOB-202ENST00000399256 GFRA3O60609 400 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 HYPMO75409 117 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 OR5G3P0C626 314 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 VDAC2P45880 294 aaPredicted RBP11.57□□□□□ -0.56
APOB-202ENST00000399256 GPR12P47775 334 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 ZNF83P51522 516 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 HNRNPA3P51991 378 aaKnown RBP11.57□□□□□ -0.56
APOB-202ENST00000399256 FAM19A2Q8N3H0 131 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 CT55Q8WUE5 264 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 LOXL4Q96JB6 756 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 TTTY12Q9BZ98 90 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 UQCR10Q9UDW1 63 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 C9JCJ5 164 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 NTN3O00634 580 aaPredicted RBP11.57□□□□□ -0.56
APOB-202ENST00000399256 ZNF253O75346 499 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 PROP1O75360 226 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 DUTP33316 252 aaKnown RBP11.57□□□□□ -0.56
APOB-202ENST00000399256 GNG4P50150 75 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 RHOBP62745 196 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 EDDM3AQ14507 147 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 DCAF12Q5T6F0 453 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 FBXW9Q5XUX1 488 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 MRPL54Q6P161 138 aaKnown RBP11.57□□□□□ -0.56
APOB-202ENST00000399256 PQLC2Q6ZP29 291 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 Q6ZVH6 145 aa11.57□□□□□ -0.56
APOB-202ENST00000399256 NANOS1Q8WY41 292 aaKnown RBP11.57□□□□□ -0.56
APOB-202ENST00000399256 WISP2O76076 250 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 CRYBB3P26998 211 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 SRIP30626 198 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 PLGLB1Q02325 96 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 TMEM136Q6ZRR5 245 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 C11orf52Q96A22 123 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 HES4Q9HCC6 221 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 TRBV9A0A0B4J1U6 114 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 IGLC2P0DOY2 106 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 IGLC3P0DOY3 106 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 NTF3P20783 257 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 MPV17P39210 176 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 MIR17HGQ75NE6 70 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 TMEM251Q8N6I4 163 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 WDR31Q8NA23 367 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 GPR179Q6PRD1 2367 aa11.56□□□□□ -0.56
APOB-202ENST00000399256 HCFC1P51610 2035 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 LNP1A1A4G5 178 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 M0R1X1 148 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 MT-CO2P00403 227 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 C3orf79P0CE67 100 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 MAJINQ3KP22 176 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 RPL39P5Q59GN2 51 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 PLA2G2CQ5R387 149 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 TIPARPQ7Z3E1 657 aaKnown RBP11.55□□□□□ -0.56
APOB-202ENST00000399256 NPVFQ9HCQ7 196 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 LAMTOR2Q9Y2Q5 125 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 ZNF318Q5VUA4 2279 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 HELTA6NFD8 242 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 ASPHD1Q5U4P2 390 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 LSM4Q9Y4Z0 139 aaKnown RBP11.55□□□□□ -0.56
APOB-202ENST00000399256 GNG10P50151 68 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 CX3CL1P78423 397 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 PSG5Q15238 335 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 ACP7Q6ZNF0 438 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 LINC00696Q6ZRV3 163 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 C11orf53Q8IXP5 236 aa11.55□□□□□ -0.56
APOB-202ENST00000399256 ASCL3Q9NQ33 180 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms