RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 MYOD1P15172 320 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 SSBP2P81877 361 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 PARP11Q9NR21 331 aa18.66■□□□□ 0.58
TSPAN4-203ENST00000397397 C15orf61A6NNL5 157 aa18.65■□□□□ 0.58
TSPAN4-203ENST00000397397 SULT1A3P0DMM9 295 aa18.65■□□□□ 0.58
TSPAN4-203ENST00000397397 SULT1A4P0DMN0 295 aa18.65■□□□□ 0.58
TSPAN4-203ENST00000397397 NDPQ00604 133 aa18.65■□□□□ 0.58
TSPAN4-203ENST00000397397 Q8N2B8 174 aa18.65■□□□□ 0.58
TSPAN4-203ENST00000397397 GRPEL2Q8TAA5 225 aa18.65■□□□□ 0.58
TSPAN4-203ENST00000397397 ARPC1AQ92747 370 aa18.65■□□□□ 0.58
TSPAN4-203ENST00000397397 COMMD5Q9GZQ3 224 aa18.65■□□□□ 0.58
TSPAN4-203ENST00000397397 OR51B2Q9Y5P1 312 aa18.65■□□□□ 0.58
TSPAN4-203ENST00000397397 TNCP24821 2201 aa18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 NDUFA7O95182 113 aa18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 OPN1MWP04001 364 aa18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 FGF2P09038 288 aa18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 OPN1MW2P0DN77 364 aa18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 OPN1MW3P0DN78 364 aa18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 COMPP49747 757 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 SMCO1Q147U7 214 aa18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 TMEM95Q3KNT9 176 aa18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 C10orf55Q5SWW7 151 aa18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 THOC7Q6I9Y2 204 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 FOXRED2Q8IWF2 684 aa18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 OR2T6Q8NHC8 308 aa18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 QTRT1Q9BXR0 403 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 TMEM14BQ9NUH8 114 aa18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 FKBP11Q9NYL4 201 aa18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 FOXA2Q9Y261 457 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-203ENST00000397397 A0A1B0GU03 582 aa18.63■□□□□ 0.57
TSPAN4-203ENST00000397397 CCSO14618 274 aa18.63■□□□□ 0.57
TSPAN4-203ENST00000397397 VDAC2P45880 294 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-203ENST00000397397 RPL27AP46776 148 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-203ENST00000397397 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-203ENST00000397397 SRSF12Q8WXF0 261 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-203ENST00000397397 TEX50A0A1B0GTY4 177 aa18.62■□□□□ 0.57
TSPAN4-203ENST00000397397 MPTX1A8MV57 137 aa18.62■□□□□ 0.57
TSPAN4-203ENST00000397397 ATP6V0E1O15342 81 aa18.62■□□□□ 0.57
TSPAN4-203ENST00000397397 C2orf68Q2NKX9 166 aa18.62■□□□□ 0.57
TSPAN4-203ENST00000397397 OR1L8Q8NGR8 309 aa18.62■□□□□ 0.57
TSPAN4-203ENST00000397397 FYTTD1Q96QD9 318 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-203ENST00000397397 SPIN2AQ99865 258 aa18.62■□□□□ 0.57
TSPAN4-203ENST00000397397 SPIN2BQ9BPZ2 258 aa18.62■□□□□ 0.57
TSPAN4-203ENST00000397397 FAM103A1Q9BTL3 118 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-203ENST00000397397 C16orf95Q9H693 158 aa18.62■□□□□ 0.57
TSPAN4-203ENST00000397397 TET2Q6N021 2002 aaPredicted RBP18.62■□□□□ 0.57
TSPAN4-203ENST00000397397 C13orf42A0A1B0GVH6 325 aa18.61■□□□□ 0.57
TSPAN4-203ENST00000397397 FAM25EA8MYX2 175 aa18.61■□□□□ 0.57
TSPAN4-203ENST00000397397 ST8SIA3O43173 380 aa18.61■□□□□ 0.57
TSPAN4-203ENST00000397397 HKR1P10072 659 aa18.61■□□□□ 0.57
TSPAN4-203ENST00000397397 SLC25A6P12236 298 aa18.61■□□□□ 0.57
TSPAN4-203ENST00000397397 ZNF429Q86V71 674 aa18.61■□□□□ 0.57
TSPAN4-203ENST00000397397 OR4F5Q8NH21 305 aa18.61■□□□□ 0.57
TSPAN4-203ENST00000397397 OR1S1Q8NH92 325 aa18.61■□□□□ 0.57
TSPAN4-203ENST00000397397 COA4Q9NYJ1 87 aa18.61■□□□□ 0.57
TSPAN4-203ENST00000397397 LINC00527Q9UJ94 153 aa18.61■□□□□ 0.57
TSPAN4-203ENST00000397397 FBXO7Q9Y3I1 522 aa18.61■□□□□ 0.57
TSPAN4-203ENST00000397397 MSGN1A6NI15 193 aa18.6■□□□□ 0.57
TSPAN4-203ENST00000397397 E7EUB6 86 aa18.6■□□□□ 0.57
TSPAN4-203ENST00000397397 AP4M1O00189 453 aa18.6■□□□□ 0.57
TSPAN4-203ENST00000397397 GOSR2O14653 212 aa18.6■□□□□ 0.57
TSPAN4-203ENST00000397397 EGR2P11161 476 aaPredicted RBP18.6■□□□□ 0.57
TSPAN4-203ENST00000397397 OR5B3Q8NH48 314 aa18.6■□□□□ 0.57
TSPAN4-203ENST00000397397 NOL4LQ96MY1 436 aaPredicted RBP18.6■□□□□ 0.57
TSPAN4-203ENST00000397397 PDCD10Q9BUL8 212 aa18.6■□□□□ 0.57
TSPAN4-203ENST00000397397 HINT2Q9BX68 163 aa18.6■□□□□ 0.57
TSPAN4-203ENST00000397397 C5orf51A6NDU8 294 aa18.59■□□□□ 0.57
TSPAN4-203ENST00000397397 NXPH3O95157 252 aa18.59■□□□□ 0.57
TSPAN4-203ENST00000397397 IFNA17P01571 189 aa18.59■□□□□ 0.57
TSPAN4-203ENST00000397397 HSPE1P61604 102 aaKnown RBP18.59■□□□□ 0.57
TSPAN4-203ENST00000397397 IAH1Q2TAA2 248 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-203ENST00000397397 GSG1LQ6UXU4 331 aa18.59■□□□□ 0.57
TSPAN4-203ENST00000397397 SGMS2Q8NHU3 365 aa18.59■□□□□ 0.57
TSPAN4-203ENST00000397397 OR10C1Q96KK4 312 aa18.59■□□□□ 0.57
TSPAN4-203ENST00000397397 SERTAD4Q9NUC0 356 aa18.59■□□□□ 0.57
TSPAN4-203ENST00000397397 ZNF257Q9Y2Q1 563 aa18.59■□□□□ 0.57
TSPAN4-203ENST00000397397 WSB1Q9Y6I7 421 aa18.59■□□□□ 0.57
TSPAN4-203ENST00000397397 IGF1P05019 195 aa18.58■□□□□ 0.57
TSPAN4-203ENST00000397397 TRAPPC2P0DI81 140 aa18.58■□□□□ 0.57
TSPAN4-203ENST00000397397 TRAPPC2BP0DI82 140 aa18.58■□□□□ 0.57
TSPAN4-203ENST00000397397 ECSCRQ19T08 205 aa18.58■□□□□ 0.57
TSPAN4-203ENST00000397397 KRTAP24-1Q3LI83 254 aa18.58■□□□□ 0.57
TSPAN4-203ENST00000397397 Q6ZNX1 250 aa18.58■□□□□ 0.57
TSPAN4-203ENST00000397397 LINC01006Q8NI28 216 aa18.58■□□□□ 0.57
TSPAN4-203ENST00000397397 MED28Q9H204 178 aa18.58■□□□□ 0.57
TSPAN4-203ENST00000397397 A0A1B0GW64 132 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 HMX3A6NHT5 357 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 CGB1A6NKQ9 187 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 PITX3O75364 302 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 APELAP0DMC3 54 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 AARDQ4LEZ3 155 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 SPINK9Q5DT21 86 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 UNQ5815/PRO19632Q6UWF5 114 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 STPG2Q8N412 459 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 LFNGQ8NES3 379 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 NDUFA4L2Q9NRX3 87 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 MGAT4CQ9UBM8 478 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 TRAV41A0A0B4J266 112 aa18.57■□□□□ 0.56
TSPAN4-203ENST00000397397 TEX22C9J3V5 150 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms