RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 TM2D3Q9BRN9 247 aa13.86□□□□□ -0.19
FXN-203ENST00000396366 ZNF2Q9BSG1 426 aaPredicted RBP13.86□□□□□ -0.19
FXN-203ENST00000396366 ZMAT4Q9H898 229 aa13.86□□□□□ -0.19
FXN-203ENST00000396366 VCX3AQ9NNX9 186 aa13.86□□□□□ -0.19
FXN-203ENST00000396366 A8MZ25 164 aa13.85□□□□□ -0.19
FXN-203ENST00000396366 NQO2P16083 231 aa13.85□□□□□ -0.19
FXN-203ENST00000396366 NAT1P18440 290 aa13.85□□□□□ -0.19
FXN-203ENST00000396366 VBP1P61758 197 aa13.85□□□□□ -0.19
FXN-203ENST00000396366 LCN12Q6JVE5 192 aa13.85□□□□□ -0.19
FXN-203ENST00000396366 Q8N402 240 aa13.85□□□□□ -0.19
FXN-203ENST00000396366 KCTD12Q96CX2 325 aaKnown RBP13.85□□□□□ -0.19
FXN-203ENST00000396366 FUNDC2Q9BWH2 189 aa13.85□□□□□ -0.19
FXN-203ENST00000396366 TMEM140Q9NV12 185 aa13.85□□□□□ -0.19
FXN-203ENST00000396366 COMMD3Q9UBI1 195 aa13.85□□□□□ -0.19
FXN-203ENST00000396366 DYNC2H1Q8NCM8 4307 aaKnown RBP13.85□□□□□ -0.19
FXN-203ENST00000396366 ZNF785A8K8V0 405 aa13.84□□□□□ -0.19
FXN-203ENST00000396366 C3orf84H3BNL1 204 aa13.84□□□□□ -0.19
FXN-203ENST00000396366 GGCTO75223 188 aaKnown RBP13.84□□□□□ -0.19
FXN-203ENST00000396366 PGLYRP1O75594 196 aaPredicted RBP13.84□□□□□ -0.19
FXN-203ENST00000396366 RLN1P04808 185 aa13.84□□□□□ -0.19
FXN-203ENST00000396366 HLA-DMAP28067 261 aa13.84□□□□□ -0.19
FXN-203ENST00000396366 PRSS3P35030 304 aa13.84□□□□□ -0.19
FXN-203ENST00000396366 ARL3P36405 182 aa13.84□□□□□ -0.19
FXN-203ENST00000396366 POU2AF1Q16633 256 aa13.84□□□□□ -0.19
FXN-203ENST00000396366 KLK9Q2XQG4 91 aa13.84□□□□□ -0.19
FXN-203ENST00000396366 DMBX1Q8NFW5 382 aa13.84□□□□□ -0.19
FXN-203ENST00000396366 OR10W1Q8NGF6 305 aa13.84□□□□□ -0.19
FXN-203ENST00000396366 MOB3AQ96BX8 217 aa13.84□□□□□ -0.19
FXN-203ENST00000396366 AIFM2Q9BRQ8 373 aa13.84□□□□□ -0.19
FXN-203ENST00000396366 ZC4H2Q9NQZ6 224 aa13.84□□□□□ -0.19
FXN-203ENST00000396366 KLK9Q9UKQ9 250 aa13.84□□□□□ -0.19
FXN-203ENST00000396366 IGLV11-55A0A075B6I3 123 aa13.83□□□□□ -0.2
FXN-203ENST00000396366 IGLC7A0M8Q6 106 aa13.83□□□□□ -0.2
FXN-203ENST00000396366 MFSD2BA6NFX1 497 aa13.83□□□□□ -0.2
FXN-203ENST00000396366 C2orf70A6NJV1 201 aa13.83□□□□□ -0.2
FXN-203ENST00000396366 DEFA4P12838 97 aa13.83□□□□□ -0.2
FXN-203ENST00000396366 FOLR2P14207 255 aa13.83□□□□□ -0.2
FXN-203ENST00000396366 HAGHQ16775 308 aa13.83□□□□□ -0.2
FXN-203ENST00000396366 DEFB114Q30KQ6 69 aa13.83□□□□□ -0.2
FXN-203ENST00000396366 OR5H2Q8NGV7 314 aa13.83□□□□□ -0.2
FXN-203ENST00000396366 MUC7Q8TAX7 377 aa13.83□□□□□ -0.2
FXN-203ENST00000396366 CACNG8Q8WXS5 425 aa13.83□□□□□ -0.2
FXN-203ENST00000396366 FXYD6Q9H0Q3 95 aa13.83□□□□□ -0.2
FXN-203ENST00000396366 PLEKHA2Q9HB19 425 aa13.83□□□□□ -0.2
FXN-203ENST00000396366 TEX50A0A1B0GTY4 177 aa13.82□□□□□ -0.2
FXN-203ENST00000396366 DHFRP00374 187 aa13.82□□□□□ -0.2
FXN-203ENST00000396366 HRH1P35367 487 aa13.82□□□□□ -0.2
FXN-203ENST00000396366 LPAR6P43657 344 aa13.82□□□□□ -0.2
FXN-203ENST00000396366 GTSCR1Q86UQ5 136 aa13.82□□□□□ -0.2
FXN-203ENST00000396366 GPHB5Q86YW7 130 aa13.82□□□□□ -0.2
FXN-203ENST00000396366 FCAMRQ8WWV6 532 aa13.82□□□□□ -0.2
FXN-203ENST00000396366 EEF1AKMT3Q96AZ1 226 aa13.82□□□□□ -0.2
FXN-203ENST00000396366 COMMD5Q9GZQ3 224 aa13.82□□□□□ -0.2
FXN-203ENST00000396366 ZNF320A2RRD8 509 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 LGALS9O00182 355 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 CLEC3BP05452 202 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 CD7P09564 240 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 HIST1H1BP16401 226 aaKnown RBP13.81□□□□□ -0.2
FXN-203ENST00000396366 ELK1P19419 428 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 F2RP25116 425 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 TAS2R46P59540 309 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 CD81P60033 236 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 ZNF585BQ52M93 769 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 CASC10Q5T4H9 136 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 SNX29P2Q8IUI4 249 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 OR2K2Q8NGT1 345 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 CD300LFQ8TDQ1 290 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 GPX8Q8TED1 209 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 DYNLRB2Q8TF09 96 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 TUBA4BQ9H853 241 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 PLEKHA3Q9HB20 300 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 NSG2Q9Y328 171 aa13.81□□□□□ -0.2
FXN-203ENST00000396366 CSMD3Q7Z407 3707 aa13.8□□□□□ -0.2
FXN-203ENST00000396366 HPGDSO60760 199 aa13.8□□□□□ -0.2
FXN-203ENST00000396366 KRASP01116 189 aa13.8□□□□□ -0.2
FXN-203ENST00000396366 CBLN1P23435 193 aa13.8□□□□□ -0.2
FXN-203ENST00000396366 WT1-ASQ06250 92 aa13.8□□□□□ -0.2
FXN-203ENST00000396366 OR6F1Q8NGZ6 308 aa13.8□□□□□ -0.2
FXN-203ENST00000396366 DGCR14Q96DF8 476 aaKnown RBP13.8□□□□□ -0.2
FXN-203ENST00000396366 WDR89Q96FK6 387 aaPredicted RBP13.8□□□□□ -0.2
FXN-203ENST00000396366 CITED4Q96RK1 184 aa13.8□□□□□ -0.2
FXN-203ENST00000396366 NEURL2Q9BR09 285 aa13.8□□□□□ -0.2
FXN-203ENST00000396366 QTRT1Q9BXR0 403 aaKnown RBP13.8□□□□□ -0.2
FXN-203ENST00000396366 NAA50Q9GZZ1 169 aaKnown RBP13.8□□□□□ -0.2
FXN-203ENST00000396366 WFDC10AQ9H1F0 79 aa13.8□□□□□ -0.2
FXN-203ENST00000396366 COMMD9Q9P000 198 aa13.8□□□□□ -0.2
FXN-203ENST00000396366 IGHV3-35A0A0C4DH35 117 aa13.79□□□□□ -0.2
FXN-203ENST00000396366 MARCH11A6NNE9 402 aa13.79□□□□□ -0.2
FXN-203ENST00000396366 APOA1P02647 267 aa13.79□□□□□ -0.2
FXN-203ENST00000396366 TRAPPC2P0DI81 140 aa13.79□□□□□ -0.2
FXN-203ENST00000396366 TRAPPC2BP0DI82 140 aa13.79□□□□□ -0.2
FXN-203ENST00000396366 G6PCP35575 357 aa13.79□□□□□ -0.2
FXN-203ENST00000396366 GUCA2BQ16661 112 aa13.79□□□□□ -0.2
FXN-203ENST00000396366 PHLDA2Q53GA4 152 aa13.79□□□□□ -0.2
FXN-203ENST00000396366 FAM209BQ5JX69 171 aa13.79□□□□□ -0.2
FXN-203ENST00000396366 UNQ9165/PRO28630Q6UXU0 137 aa13.79□□□□□ -0.2
FXN-203ENST00000396366 DEFB125Q8N687 156 aa13.79□□□□□ -0.2
FXN-203ENST00000396366 BORCS5Q969J3 196 aa13.79□□□□□ -0.2
FXN-203ENST00000396366 TRBV7-1A0A0A6YYK4 115 aa13.78□□□□□ -0.2
FXN-203ENST00000396366 SMIM31A0A1B0GVY4 71 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms