RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 DLX6P56179 175 aa9.91□□□□□ -0.82
ITGB1-202ENST00000396033 GNB2P62879 340 aa9.91□□□□□ -0.82
ITGB1-202ENST00000396033 PDLIM3Q53GG5 364 aaPredicted RBP9.91□□□□□ -0.82
ITGB1-202ENST00000396033 KIAA1456Q9P272 454 aa9.91□□□□□ -0.82
ITGB1-202ENST00000396033 FOXA2Q9Y261 457 aaPredicted RBP9.91□□□□□ -0.82
ITGB1-202ENST00000396033 CACNA1AO00555 2505 aa9.91□□□□□ -0.82
ITGB1-202ENST00000396033 SCAF4O95104 1147 aaKnown RBP9.91□□□□□ -0.82
ITGB1-202ENST00000396033 VDAC2P45880 294 aaPredicted RBP9.91□□□□□ -0.82
ITGB1-202ENST00000396033 RARRES2Q99969 163 aa9.91□□□□□ -0.82
ITGB1-202ENST00000396033 RAB1BQ9H0U4 201 aa9.91□□□□□ -0.82
ITGB1-202ENST00000396033 RPS10P5Q9NQ39 176 aa9.91□□□□□ -0.82
ITGB1-202ENST00000396033 TIMM9Q9Y5J7 89 aa9.91□□□□□ -0.82
ITGB1-202ENST00000396033 J3QR06 171 aa9.91□□□□□ -0.82
ITGB1-202ENST00000396033 MT-ND4LP03901 98 aa9.91□□□□□ -0.82
ITGB1-202ENST00000396033 POU2AF1Q16633 256 aa9.91□□□□□ -0.82
ITGB1-202ENST00000396033 TMEM41BQ5BJD5 291 aa9.91□□□□□ -0.82
ITGB1-202ENST00000396033 CBLN4Q9NTU7 201 aa9.91□□□□□ -0.82
ITGB1-202ENST00000396033 RALYQ9UKM9 306 aaKnown RBP9.91□□□□□ -0.82
ITGB1-202ENST00000396033 A0A1B0GW64 132 aa9.9□□□□□ -0.82
ITGB1-202ENST00000396033 RBFOX3A6NFN3 312 aa9.9□□□□□ -0.82
ITGB1-202ENST00000396033 PFDN5Q99471 154 aa9.9□□□□□ -0.82
ITGB1-202ENST00000396033 TMEM14BQ9NUH8 114 aa9.9□□□□□ -0.82
ITGB1-202ENST00000396033 AP4M1O00189 453 aa9.9□□□□□ -0.82
ITGB1-202ENST00000396033 IGHV1-8P0DP01 117 aa9.9□□□□□ -0.82
ITGB1-202ENST00000396033 UQCRFS1P47985 274 aa9.9□□□□□ -0.82
ITGB1-202ENST00000396033 HAGHQ16775 308 aa9.9□□□□□ -0.82
ITGB1-202ENST00000396033 ENY2Q9NPA8 101 aa9.9□□□□□ -0.82
ITGB1-202ENST00000396033 LY6HO94772 140 aa9.9□□□□□ -0.83
ITGB1-202ENST00000396033 SOD3P08294 240 aa9.9□□□□□ -0.83
ITGB1-202ENST00000396033 SNRNP70P08621 437 aaKnown RBP9.9□□□□□ -0.83
ITGB1-202ENST00000396033 VWC2Q2TAL6 325 aa9.9□□□□□ -0.83
ITGB1-202ENST00000396033 CYB5R2Q6BCY4 276 aa9.9□□□□□ -0.83
ITGB1-202ENST00000396033 LINC00311Q8N616 119 aa9.9□□□□□ -0.83
ITGB1-202ENST00000396033 C8orf31Q8N9H6 132 aa9.9□□□□□ -0.83
ITGB1-202ENST00000396033 MISP3Q96FF7 219 aa9.9□□□□□ -0.83
ITGB1-202ENST00000396033 HINT2Q9BX68 163 aa9.9□□□□□ -0.83
ITGB1-202ENST00000396033 SLC35B3Q9H1N7 401 aa9.9□□□□□ -0.83
ITGB1-202ENST00000396033 OR51B2Q9Y5P1 312 aa9.9□□□□□ -0.83
ITGB1-202ENST00000396033 TET2Q6N021 2002 aaPredicted RBP9.89□□□□□ -0.83
ITGB1-202ENST00000396033 H0YJW9 148 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 HSPE1P61604 102 aaKnown RBP9.89□□□□□ -0.83
ITGB1-202ENST00000396033 LCN15Q6UWW0 184 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 OR9G1Q8NH87 305 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 MALSU1Q96EH3 234 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 RCC1LQ96I51 464 aaKnown RBP9.89□□□□□ -0.83
ITGB1-202ENST00000396033 PRNDQ9UKY0 176 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 PKD1L2Q7Z442 2459 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 HIVEP3Q5T1R4 2406 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 SMCO3A2RU48 225 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 SRRM4A7MD48 611 aaKnown RBP9.89□□□□□ -0.83
ITGB1-202ENST00000396033 RRHO14718 337 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 MYOD1P15172 320 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 HOXA5P20719 270 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 ZNF726P1Q15940 193 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 ZNF787Q6DD87 383 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 ABHD12Q8N2K0 398 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 ZNF709Q8N972 641 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 TMEM186Q96B77 213 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 HARBI1Q96MB7 349 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 NPCDR1Q9BY65 106 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 CXCL1P09341 107 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 SAA1P0DJI8 122 aaPredicted RBP9.89□□□□□ -0.83
ITGB1-202ENST00000396033 OR13C7P0DN81 318 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 MAS1LP35410 378 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 SP5Q6BEB4 398 aaPredicted RBP9.89□□□□□ -0.83
ITGB1-202ENST00000396033 FAM71F2Q6NXP2 309 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 ZNF841Q6ZN19 808 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 SSX7Q7RTT5 188 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 ZNF596Q8TC21 504 aa9.89□□□□□ -0.83
ITGB1-202ENST00000396033 A0A087X0M5 115 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 TRAV1-1A0A0B4J248 108 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 A0A1B0GX30 115 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 UPK2O00526 184 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 FSTL3O95633 263 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 GNLYP22749 145 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 SSTP61278 116 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 RAB11AP62491 216 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 DIAPH2-AS1Q14236 149 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 GAMTQ14353 236 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 C11orf71Q6IPW1 123 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 ZNF343Q6P1L6 599 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 ACSM6Q6P461 480 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 CENPVQ7Z7K6 275 aaPredicted RBP9.88□□□□□ -0.83
ITGB1-202ENST00000396033 OR8B3Q8NGG8 313 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 OSR1Q8TAX0 266 aaPredicted RBP9.88□□□□□ -0.83
ITGB1-202ENST00000396033 OR8B2Q96RD0 313 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 NEU1Q99519 415 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 TMEM133Q9H2Q1 129 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 S100A9P06702 114 aaKnown RBP9.88□□□□□ -0.83
ITGB1-202ENST00000396033 CD1BP29016 333 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 FGF8P55075 233 aaPredicted RBP9.88□□□□□ -0.83
ITGB1-202ENST00000396033 C4orf17Q53FE4 359 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 OR5AN1Q8NGI8 311 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 CLDND2Q8NHS1 167 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 TMPRSS5Q9H3S3 457 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 SMDT1Q9H4I9 107 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 LRBAP50851 2863 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 C17orf112F2Z3M2 114 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 FFAR4Q5NUL3 377 aa9.88□□□□□ -0.83
ITGB1-202ENST00000396033 SLC24A4Q8NFF2 622 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms