RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 OR4A5Q8NH83 315 aa10.24□□□□□ -0.77
SCAF11-203ENST00000395453 S100A16Q96FQ6 103 aaKnown RBP10.24□□□□□ -0.77
SCAF11-203ENST00000395453 SLC5A7Q9GZV3 580 aa10.24□□□□□ -0.77
SCAF11-203ENST00000395453 LGALS9O00182 355 aa10.23□□□□□ -0.77
SCAF11-203ENST00000395453 SULT1C2O00338 296 aa10.23□□□□□ -0.77
SCAF11-203ENST00000395453 HPRT1P00492 218 aa10.23□□□□□ -0.77
SCAF11-203ENST00000395453 AREGP15514 252 aa10.23□□□□□ -0.77
SCAF11-203ENST00000395453 PSMB6P28072 239 aa10.23□□□□□ -0.77
SCAF11-203ENST00000395453 TGFBR1P36897 503 aa10.23□□□□□ -0.77
SCAF11-203ENST00000395453 TAS2R31P59538 309 aa10.23□□□□□ -0.77
SCAF11-203ENST00000395453 ZNF818PQ6ZRF7 136 aa10.23□□□□□ -0.77
SCAF11-203ENST00000395453 SSX9Q7RTT3 188 aa10.23□□□□□ -0.77
SCAF11-203ENST00000395453 YIPF6Q96EC8 236 aa10.23□□□□□ -0.77
SCAF11-203ENST00000395453 FYTTD1Q96QD9 318 aaKnown RBP10.23□□□□□ -0.77
SCAF11-203ENST00000395453 FBXL7Q9UJT9 491 aa10.23□□□□□ -0.77
SCAF11-203ENST00000395453 ANAPC10Q9UM13 185 aa10.23□□□□□ -0.77
SCAF11-203ENST00000395453 DPPA5A6NC42 116 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 ZNF785A8K8V0 405 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 PPP5D1E7EU14 171 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 GGCTO75223 188 aaKnown RBP10.22□□□□□ -0.77
SCAF11-203ENST00000395453 NDUFB8O95169 186 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 FCER2P06734 321 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 FGF2P09038 288 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 MYOD1P15172 320 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 HLA-GP17693 338 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 NAT1P18440 290 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 GNRHRP30968 328 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 OR2B8PP59922 312 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 DEFB114Q30KQ6 69 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 UBE2NLQ5JXB2 153 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 GTSCR1Q86UQ5 136 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 GPHB5Q86YW7 130 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 CCDC140Q96MF4 163 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 PLEKHA2Q9HB19 425 aa10.22□□□□□ -0.77
SCAF11-203ENST00000395453 IGLV11-55A0A075B6I3 123 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 TRAV3A0A0B4J244 114 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 MEIS3P1A6NDR6 274 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 C2orf70A6NJV1 201 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 UPK2O00526 184 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 OR2C1O95371 312 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 DHFRP00374 187 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 HLA-AP01891 365 aaKnown RBP10.21□□□□□ -0.78
SCAF11-203ENST00000395453 NQO2P16083 231 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 HIST1H1BP16401 226 aaKnown RBP10.21□□□□□ -0.78
SCAF11-203ENST00000395453 RFX2P48378 723 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 FXYD4P59646 89 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 CATR1Q13166 79 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 HAGHQ16775 308 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 CD300EQ496F6 205 aaPredicted RBP10.21□□□□□ -0.78
SCAF11-203ENST00000395453 LINC00322Q6ZN03 302 aaPredicted RBP10.21□□□□□ -0.78
SCAF11-203ENST00000395453 LAX1Q8IWV1 398 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 IL17DQ8TAD2 202 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 CD300LFQ8TDQ1 290 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 SPATA25Q9BR10 227 aa10.21□□□□□ -0.78
SCAF11-203ENST00000395453 A0A087WXM4 84 aa10.2□□□□□ -0.78
SCAF11-203ENST00000395453 RBMY1BA6NDE4 496 aaKnown RBP10.2□□□□□ -0.78
SCAF11-203ENST00000395453 RBMY1EA6NEQ0 496 aaKnown RBP10.2□□□□□ -0.78
SCAF11-203ENST00000395453 IFNA6P05013 189 aa10.2□□□□□ -0.78
SCAF11-203ENST00000395453 RBMY1DP0C7P1 496 aaKnown RBP10.2□□□□□ -0.78
SCAF11-203ENST00000395453 FOLR2P14207 255 aa10.2□□□□□ -0.78
SCAF11-203ENST00000395453 CADM3Q8N126 398 aa10.2□□□□□ -0.78
SCAF11-203ENST00000395453 SAMD12Q8N8I0 201 aa10.2□□□□□ -0.78
SCAF11-203ENST00000395453 TSPAN14Q8NG11 270 aa10.2□□□□□ -0.78
SCAF11-203ENST00000395453 BORCS5Q969J3 196 aa10.2□□□□□ -0.78
SCAF11-203ENST00000395453 SRSF8Q9BRL6 282 aaKnown RBP10.2□□□□□ -0.78
SCAF11-203ENST00000395453 TUBA4BQ9H853 241 aa10.2□□□□□ -0.78
SCAF11-203ENST00000395453 HRASLSQ9HDD0 168 aa10.2□□□□□ -0.78
SCAF11-203ENST00000395453 IFT46Q9NQC8 304 aa10.2□□□□□ -0.78
SCAF11-203ENST00000395453 ZC4H2Q9NQZ6 224 aa10.2□□□□□ -0.78
SCAF11-203ENST00000395453 TECRQ9NZ01 308 aaKnown RBP10.2□□□□□ -0.78
SCAF11-203ENST00000395453 EHFQ9NZC4 300 aa10.2□□□□□ -0.78
SCAF11-203ENST00000395453 TRBV7-1A0A0A6YYK4 115 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 IGLC7A0M8Q6 106 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 IGHV3-23P01764 117 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 REG1AP05451 166 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 EDN2P20800 178 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 ARL3P36405 182 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 TAS2R20P59543 309 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 HERV-K104P61576 105 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 LSM3P62310 102 aaKnown RBP10.19□□□□□ -0.78
SCAF11-203ENST00000395453 TMEM69Q5SWH9 247 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 CLEC19AQ6UXS0 136 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 TMEM17Q86X19 198 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 LYSMD2Q8IV50 215 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 OR51H1Q8NH63 302 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 SLC25A46Q96AG3 418 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 EEF1AKMT3Q96AZ1 226 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 MOB3AQ96BX8 217 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 COMMD9Q9P000 198 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 FRAS1Q86XX4 4008 aa10.19□□□□□ -0.78
SCAF11-203ENST00000395453 PLECQ15149 4684 aaKnown RBP10.18□□□□□ -0.78
SCAF11-203ENST00000395453 MFSD2BA6NFX1 497 aa10.18□□□□□ -0.78
SCAF11-203ENST00000395453 A8MWP6 167 aa10.18□□□□□ -0.78
SCAF11-203ENST00000395453 PGLYRP1O75594 196 aaPredicted RBP10.18□□□□□ -0.78
SCAF11-203ENST00000395453 S1PR2O95136 353 aa10.18□□□□□ -0.78
SCAF11-203ENST00000395453 TNFAIP8O95379 198 aa10.18□□□□□ -0.78
SCAF11-203ENST00000395453 DEFA4P12838 97 aa10.18□□□□□ -0.78
SCAF11-203ENST00000395453 CBLN1P23435 193 aa10.18□□□□□ -0.78
SCAF11-203ENST00000395453 F2RP25116 425 aa10.18□□□□□ -0.78
SCAF11-203ENST00000395453 PRSS3P35030 304 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms