RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 TPRA1Q86W33 373 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 VKORC1L1Q8N0U8 176 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 STPG3Q8N7X2 389 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 TSPAN14Q8NG11 270 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 OR10R2Q8NGX6 335 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 MARC2Q969Z3 335 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 FYTTD1Q96QD9 318 aaKnown RBP11.67□□□□□ -0.54
SNCA-205ENST00000394991 SPAG8Q99932 426 aaPredicted RBP11.67□□□□□ -0.54
SNCA-205ENST00000394991 ATG5Q9H1Y0 275 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 RNF167Q9H6Y7 350 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 SLC2A9Q9NRM0 540 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 DAPK2Q9UIK4 370 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 KLK9Q9UKQ9 250 aa11.67□□□□□ -0.54
SNCA-205ENST00000394991 DNAH17Q9UFH2 4485 aa11.66□□□□□ -0.54
SNCA-205ENST00000394991 A0A087WXM4 84 aa11.66□□□□□ -0.54
SNCA-205ENST00000394991 IGHV3-35A0A0C4DH35 117 aa11.66□□□□□ -0.54
SNCA-205ENST00000394991 METTL21EPA6NDL7 271 aa11.66□□□□□ -0.54
SNCA-205ENST00000394991 TNFAIP8O95379 198 aa11.66□□□□□ -0.54
SNCA-205ENST00000394991 CRYGCP07315 174 aa11.66□□□□□ -0.54
SNCA-205ENST00000394991 CLEC2LP0C7M8 214 aa11.66□□□□□ -0.54
SNCA-205ENST00000394991 ZNF735P0CB33 412 aa11.66□□□□□ -0.54
SNCA-205ENST00000394991 RAB6AP20340 208 aa11.66□□□□□ -0.54
SNCA-205ENST00000394991 SDC2P34741 201 aa11.66□□□□□ -0.54
SNCA-205ENST00000394991 RPL30P62888 115 aaKnown RBP11.66□□□□□ -0.54
SNCA-205ENST00000394991 OR2B11Q5JQS5 317 aa11.66□□□□□ -0.54
SNCA-205ENST00000394991 H1FOOQ8IZA3 346 aaPredicted RBP11.66□□□□□ -0.54
SNCA-205ENST00000394991 SLC38A6Q8IZM9 456 aa11.66□□□□□ -0.54
SNCA-205ENST00000394991 VCX3AQ9NNX9 186 aa11.66□□□□□ -0.54
SNCA-205ENST00000394991 MRPL27Q9P0M9 148 aaKnown RBP11.66□□□□□ -0.54
SNCA-205ENST00000394991 DYNC1H1Q14204 4646 aaKnown RBP11.65□□□□□ -0.54
SNCA-205ENST00000394991 IGLV11-55A0A075B6I3 123 aa11.65□□□□□ -0.54
SNCA-205ENST00000394991 DPPA5A6NC42 116 aa11.65□□□□□ -0.54
SNCA-205ENST00000394991 KBTBD11O94819 623 aa11.65□□□□□ -0.54
SNCA-205ENST00000394991 MYOD1P15172 320 aa11.65□□□□□ -0.54
SNCA-205ENST00000394991 GNB3P16520 340 aa11.65□□□□□ -0.54
SNCA-205ENST00000394991 PSMB6P28072 239 aa11.65□□□□□ -0.54
SNCA-205ENST00000394991 TMEM167AQ8TBQ9 72 aa11.65□□□□□ -0.54
SNCA-205ENST00000394991 GINS4Q9BRT9 223 aa11.65□□□□□ -0.54
SNCA-205ENST00000394991 DCUN1D5Q9BTE7 237 aa11.65□□□□□ -0.54
SNCA-205ENST00000394991 CENPOQ9BU64 300 aa11.65□□□□□ -0.54
SNCA-205ENST00000394991 C5orf66Q9H5L9 145 aa11.65□□□□□ -0.54
SNCA-205ENST00000394991 MAP6D1Q9H9H5 199 aa11.65□□□□□ -0.54
SNCA-205ENST00000394991 FBXL17Q9UF56 701 aa11.65□□□□□ -0.54
SNCA-205ENST00000394991 DNAH11Q96DT5 4516 aa11.65□□□□□ -0.55
SNCA-205ENST00000394991 IGKV1D-8A0A087WSZ0 117 aa11.64□□□□□ -0.55
SNCA-205ENST00000394991 A0A1B0GVY2 172 aa11.64□□□□□ -0.55
SNCA-205ENST00000394991 CGB1A6NKQ9 187 aa11.64□□□□□ -0.55
SNCA-205ENST00000394991 RAB27BO00194 218 aa11.64□□□□□ -0.55
SNCA-205ENST00000394991 TSPAN4O14817 238 aa11.64□□□□□ -0.55
SNCA-205ENST00000394991 REG1AP05451 166 aa11.64□□□□□ -0.55
SNCA-205ENST00000394991 CLEC3BP05452 202 aa11.64□□□□□ -0.55
SNCA-205ENST00000394991 GPR183P32249 361 aa11.64□□□□□ -0.55
SNCA-205ENST00000394991 ELLP55199 621 aaPredicted RBP11.64□□□□□ -0.55
SNCA-205ENST00000394991 ARFRP1Q13795 201 aa11.64□□□□□ -0.55
SNCA-205ENST00000394991 SFXN4Q6P4A7 337 aa11.64□□□□□ -0.55
SNCA-205ENST00000394991 KCTD9Q7L273 389 aa11.64□□□□□ -0.55
SNCA-205ENST00000394991 PUSL1Q8N0Z8 303 aaKnown RBP11.64□□□□□ -0.55
SNCA-205ENST00000394991 TRBV7-1A0A0A6YYK4 115 aa11.63□□□□□ -0.55
SNCA-205ENST00000394991 J3QRK9 145 aa11.63□□□□□ -0.55
SNCA-205ENST00000394991 HIST1H1BP16401 226 aaKnown RBP11.63□□□□□ -0.55
SNCA-205ENST00000394991 HIST1H1DP16402 221 aaKnown RBP11.63□□□□□ -0.55
SNCA-205ENST00000394991 RBMS2Q15434 407 aaKnown RBP11.63□□□□□ -0.55
SNCA-205ENST00000394991 IDNKQ5T6J7 187 aa11.63□□□□□ -0.55
SNCA-205ENST00000394991 C11orf45Q8TAV5 145 aa11.63□□□□□ -0.55
SNCA-205ENST00000394991 ZNF502Q8TBZ5 544 aa11.63□□□□□ -0.55
SNCA-205ENST00000394991 GALNT14Q96FL9 552 aa11.63□□□□□ -0.55
SNCA-205ENST00000394991 OR2A7Q96R45 310 aa11.63□□□□□ -0.55
SNCA-205ENST00000394991 ZNF436Q9C0F3 470 aaPredicted RBP11.63□□□□□ -0.55
SNCA-205ENST00000394991 UFC1Q9Y3C8 167 aa11.63□□□□□ -0.55
SNCA-205ENST00000394991 MFNGO00587 321 aa11.62□□□□□ -0.55
SNCA-205ENST00000394991 IGLV2-14P01704 120 aa11.62□□□□□ -0.55
SNCA-205ENST00000394991 TALDO1P37837 337 aa11.62□□□□□ -0.55
SNCA-205ENST00000394991 BRWD1-AS2P59051 145 aa11.62□□□□□ -0.55
SNCA-205ENST00000394991 TIMM50Q3ZCQ8 353 aa11.62□□□□□ -0.55
SNCA-205ENST00000394991 ZNF645Q8N7E2 425 aa11.62□□□□□ -0.55
SNCA-205ENST00000394991 OR5B3Q8NH48 314 aa11.62□□□□□ -0.55
SNCA-205ENST00000394991 LGALS14Q8TCE9 139 aa11.62□□□□□ -0.55
SNCA-205ENST00000394991 TMEM190Q8WZ59 177 aa11.62□□□□□ -0.55
SNCA-205ENST00000394991 APLNQ9ULZ1 77 aa11.62□□□□□ -0.55
SNCA-205ENST00000394991 RBMX2Q9Y388 322 aaKnown RBP11.62□□□□□ -0.55
SNCA-205ENST00000394991 DHFRP00374 187 aa11.61□□□□□ -0.55
SNCA-205ENST00000394991 MAS1LP35410 378 aa11.61□□□□□ -0.55
SNCA-205ENST00000394991 TGFBR1P36897 503 aa11.61□□□□□ -0.55
SNCA-205ENST00000394991 LSM3P62310 102 aaKnown RBP11.61□□□□□ -0.55
SNCA-205ENST00000394991 ZNF124Q15973 351 aa11.61□□□□□ -0.55
SNCA-205ENST00000394991 CDNFQ49AH0 187 aa11.61□□□□□ -0.55
SNCA-205ENST00000394991 APRG1Q8IVJ8 170 aa11.61□□□□□ -0.55
SNCA-205ENST00000394991 VSTM2AQ8TAG5 236 aa11.61□□□□□ -0.55
SNCA-205ENST00000394991 CD300LFQ8TDQ1 290 aa11.61□□□□□ -0.55
SNCA-205ENST00000394991 C2CD4CQ8TF44 421 aa11.61□□□□□ -0.55
SNCA-205ENST00000394991 YIPF6Q96EC8 236 aa11.61□□□□□ -0.55
SNCA-205ENST00000394991 CXorf58Q96LI9 332 aa11.61□□□□□ -0.55
SNCA-205ENST00000394991 MFFQ9GZY8 342 aa11.61□□□□□ -0.55
SNCA-205ENST00000394991 C11orf68Q9H3H3 251 aaKnown RBP11.61□□□□□ -0.55
SNCA-205ENST00000394991 ELF5Q9UKW6 265 aaPredicted RBP11.61□□□□□ -0.55
SNCA-205ENST00000394991 MRPS7Q9Y2R9 242 aaKnown RBP11.61□□□□□ -0.55
SNCA-205ENST00000394991 PRELID3BQ9Y3B1 194 aa11.61□□□□□ -0.55
SNCA-205ENST00000394991 ABCA13Q86UQ4 5058 aa11.61□□□□□ -0.55
SNCA-205ENST00000394991 IGKV1D-13A0A0B4J2D9 117 aa11.6□□□□□ -0.55
SNCA-205ENST00000394991 IFNA4P05014 189 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms