RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 TMEM17Q86X19 198 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 ANKRD13BQ86YJ7 626 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 NECAP1Q8NC96 275 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 OR10W1Q8NGF6 305 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 OR51H1Q8NH63 302 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 GPX8Q8TED1 209 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 MOB3AQ96BX8 217 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 ISOC1Q96CN7 298 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 FYTTD1Q96QD9 318 aaKnown RBP6.69□□□□□ -1.34
ATG4A-205ENST00000394892 CITED4Q96RK1 184 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 BET1LQ9NYM9 111 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 FBXL7Q9UJT9 491 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 ZNF257Q9Y2Q1 563 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 MRPS7Q9Y2R9 242 aaKnown RBP6.69□□□□□ -1.34
ATG4A-205ENST00000394892 TENM2Q9NT68 2774 aa6.69□□□□□ -1.34
ATG4A-205ENST00000394892 TMEM127O75204 238 aa6.68□□□□□ -1.34
ATG4A-205ENST00000394892 TNFAIP8O95379 198 aa6.68□□□□□ -1.34
ATG4A-205ENST00000394892 ELK1P19419 428 aa6.68□□□□□ -1.34
ATG4A-205ENST00000394892 MAS1LP35410 378 aa6.68□□□□□ -1.34
ATG4A-205ENST00000394892 CBX5P45973 191 aa6.68□□□□□ -1.34
ATG4A-205ENST00000394892 WT1-ASQ06250 92 aa6.68□□□□□ -1.34
ATG4A-205ENST00000394892 CTF1Q16619 201 aa6.68□□□□□ -1.34
ATG4A-205ENST00000394892 RPEL1Q2QD12 228 aa6.68□□□□□ -1.34
ATG4A-205ENST00000394892 DEFB114Q30KQ6 69 aa6.68□□□□□ -1.34
ATG4A-205ENST00000394892 CD300EQ496F6 205 aaPredicted RBP6.68□□□□□ -1.34
ATG4A-205ENST00000394892 ZFAND6Q6FIF0 208 aa6.68□□□□□ -1.34
ATG4A-205ENST00000394892 LINC00322Q6ZN03 302 aaPredicted RBP6.68□□□□□ -1.34
ATG4A-205ENST00000394892 ZBTB34Q8NCN2 500 aa6.68□□□□□ -1.34
ATG4A-205ENST00000394892 CACNG8Q8WXS5 425 aa6.68□□□□□ -1.34
ATG4A-205ENST00000394892 S100A16Q96FQ6 103 aaKnown RBP6.68□□□□□ -1.34
ATG4A-205ENST00000394892 ZNF2Q9BSG1 426 aaPredicted RBP6.68□□□□□ -1.34
ATG4A-205ENST00000394892 WFDC10AQ9H1F0 79 aa6.68□□□□□ -1.34
ATG4A-205ENST00000394892 GAR1Q9NY12 217 aaKnown RBP6.68□□□□□ -1.34
ATG4A-205ENST00000394892 EHFQ9NZC4 300 aa6.68□□□□□ -1.34
ATG4A-205ENST00000394892 DNAH1Q9P2D7 4330 aa6.68□□□□□ -1.34
ATG4A-205ENST00000394892 PLECQ15149 4684 aaKnown RBP6.67□□□□□ -1.34
ATG4A-205ENST00000394892 TEX50A0A1B0GTY4 177 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 TMEM213A2RRL7 107 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 C2orf70A6NJV1 201 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 F8W735 103 aaPredicted RBP6.67□□□□□ -1.34
ATG4A-205ENST00000394892 HPGDSO60760 199 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 JTBO76095 146 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 ACTL6BO94805 426 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 HPRT1P00492 218 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 HRASP01112 189 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 IGKV1-39P01597 117 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 IGKV1D-39P04432 117 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 CD7P09564 240 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 HLA-DMAP28067 261 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 HRH1P35367 487 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 KIR2DS2P43631 304 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 TAS2R31P59538 309 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 HAGHQ16775 308 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 TMEM69Q5SWH9 247 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 CLEC19AQ6UXS0 136 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 UNQ9165/PRO28630Q6UXU0 137 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 VSTM2AQ8TAG5 236 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 FCAMRQ8WWV6 532 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 EDA2RQ9HAV5 297 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 PLEKHA2Q9HB19 425 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 TMEM140Q9NV12 185 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 COMMD3Q9UBI1 195 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 NSG2Q9Y328 171 aa6.67□□□□□ -1.34
ATG4A-205ENST00000394892 RBMY1BA6NDE4 496 aaKnown RBP6.66□□□□□ -1.34
ATG4A-205ENST00000394892 RBMY1EA6NEQ0 496 aaKnown RBP6.66□□□□□ -1.34
ATG4A-205ENST00000394892 CREBL2O60519 120 aaPredicted RBP6.66□□□□□ -1.34
ATG4A-205ENST00000394892 RLN1P04808 185 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 RBMY1DP0C7P1 496 aaKnown RBP6.66□□□□□ -1.34
ATG4A-205ENST00000394892 FOLR2P14207 255 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 NQO2P16083 231 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 PRSS3P35030 304 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 LPAR6P43657 344 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 AADACL3Q5VUY0 350 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 SLC25A42Q86VD7 318 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 GPHB5Q86YW7 130 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 SNX29P2Q8IUI4 249 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 CROCCP3Q8IVE0 287 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 OR4A5Q8NH83 315 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 IL17DQ8TAD2 202 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 ZNF502Q8TBZ5 544 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 LYSTQ99698 3801 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 RETNQ9HD89 108 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 HRASLSQ9HDD0 168 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 IFT46Q9NQC8 304 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 ZC4H2Q9NQZ6 224 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 NDUFA4L2Q9NRX3 87 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 MLXQ9UH92 298 aa6.66□□□□□ -1.34
ATG4A-205ENST00000394892 IGHV3-35A0A0C4DH35 117 aa6.65□□□□□ -1.34
ATG4A-205ENST00000394892 H0Y980 276 aa6.65□□□□□ -1.34
ATG4A-205ENST00000394892 M0QYG6 137 aa6.65□□□□□ -1.34
ATG4A-205ENST00000394892 LGALS9O00182 355 aa6.65□□□□□ -1.34
ATG4A-205ENST00000394892 GGCTO75223 188 aaKnown RBP6.65□□□□□ -1.34
ATG4A-205ENST00000394892 GABARAPO95166 117 aa6.65□□□□□ -1.34
ATG4A-205ENST00000394892 APOA1P02647 267 aa6.65□□□□□ -1.34
ATG4A-205ENST00000394892 IFNA6P05013 189 aa6.65□□□□□ -1.34
ATG4A-205ENST00000394892 CLEC3BP05452 202 aa6.65□□□□□ -1.34
ATG4A-205ENST00000394892 F2RP25116 425 aa6.65□□□□□ -1.34
ATG4A-205ENST00000394892 G6PCP35575 357 aa6.65□□□□□ -1.34
ATG4A-205ENST00000394892 HERV-K104P61576 105 aa6.65□□□□□ -1.34
ATG4A-205ENST00000394892 PHLDA2Q53GA4 152 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms