RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MLXQ9UH92 298 aa13.1□□□□□ -0.31
SNRPA1-202ENST00000394082 ZNF320A2RRD8 509 aa13.09□□□□□ -0.31
SNRPA1-202ENST00000394082 CLEC3BP05452 202 aa13.09□□□□□ -0.31
SNRPA1-202ENST00000394082 DEFA4P12838 97 aa13.09□□□□□ -0.31
SNRPA1-202ENST00000394082 TAS2R31P59538 309 aa13.09□□□□□ -0.31
SNRPA1-202ENST00000394082 TIMM50Q3ZCQ8 353 aa13.09□□□□□ -0.31
SNRPA1-202ENST00000394082 C19orf35Q6ZS72 473 aa13.09□□□□□ -0.31
SNRPA1-202ENST00000394082 OR52B4Q8NGK2 314 aa13.09□□□□□ -0.31
SNRPA1-202ENST00000394082 CACNG8Q8WXS5 425 aa13.09□□□□□ -0.31
SNRPA1-202ENST00000394082 YTHDF1Q9BYJ9 559 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-202ENST00000394082 THYN1Q9P016 225 aa13.09□□□□□ -0.31
SNRPA1-202ENST00000394082 MRPL27Q9P0M9 148 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-202ENST00000394082 ALMS1Q8TCU4 4167 aa13.09□□□□□ -0.31
SNRPA1-202ENST00000394082 LOC102724200A0A096LPH7 203 aaPredicted RBP13.08□□□□□ -0.32
SNRPA1-202ENST00000394082 A0A0A6YYH2 397 aa13.08□□□□□ -0.32
SNRPA1-202ENST00000394082 A6NJ64 397 aa13.08□□□□□ -0.32
SNRPA1-202ENST00000394082 CGB1A6NKQ9 187 aa13.08□□□□□ -0.32
SNRPA1-202ENST00000394082 OR2B8PP59922 312 aa13.08□□□□□ -0.32
SNRPA1-202ENST00000394082 THOC7Q6I9Y2 204 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-202ENST00000394082 SFXN4Q6P4A7 337 aa13.08□□□□□ -0.32
SNRPA1-202ENST00000394082 WFDC3Q8IUB2 231 aa13.08□□□□□ -0.32
SNRPA1-202ENST00000394082 BEST4Q8NFU0 473 aa13.08□□□□□ -0.32
SNRPA1-202ENST00000394082 FCGR1BQ92637 280 aa13.08□□□□□ -0.32
SNRPA1-202ENST00000394082 RHBDL2Q9NX52 303 aa13.08□□□□□ -0.32
SNRPA1-202ENST00000394082 DAPK2Q9UIK4 370 aa13.08□□□□□ -0.32
SNRPA1-202ENST00000394082 HPRT1P00492 218 aa13.07□□□□□ -0.32
SNRPA1-202ENST00000394082 IGHV3-23P01764 117 aa13.07□□□□□ -0.32
SNRPA1-202ENST00000394082 PTBP1P26599 531 aaKnown RBP eCLIP13.07□□□□□ -0.32
SNRPA1-202ENST00000394082 SSX9Q7RTT3 188 aa13.07□□□□□ -0.32
SNRPA1-202ENST00000394082 HOGA1Q86XE5 327 aa13.07□□□□□ -0.32
SNRPA1-202ENST00000394082 SPAG16Q8N0X2 631 aa13.07□□□□□ -0.32
SNRPA1-202ENST00000394082 OR13F1Q8NGS4 319 aa13.07□□□□□ -0.32
SNRPA1-202ENST00000394082 ZNF502Q8TBZ5 544 aa13.07□□□□□ -0.32
SNRPA1-202ENST00000394082 LGALS14Q8TCE9 139 aa13.07□□□□□ -0.32
SNRPA1-202ENST00000394082 CD300LFQ8TDQ1 290 aa13.07□□□□□ -0.32
SNRPA1-202ENST00000394082 ATP6V0BQ99437 205 aa13.07□□□□□ -0.32
SNRPA1-202ENST00000394082 OVOL2Q9BRP0 275 aa13.07□□□□□ -0.32
SNRPA1-202ENST00000394082 TP53TG1Q9Y2A0 90 aa13.07□□□□□ -0.32
SNRPA1-202ENST00000394082 UFC1Q9Y3C8 167 aa13.07□□□□□ -0.32
SNRPA1-202ENST00000394082 ETV7Q9Y603 341 aa13.07□□□□□ -0.32
SNRPA1-202ENST00000394082 IGLC7A0M8Q6 106 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 SMIM30A4D0T7 59 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 MFSD2BA6NFX1 497 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 CYB5BO43169 146 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 TMEM127O75204 238 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 PPYP01298 95 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 MYOD1P15172 320 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 NQO2P16083 231 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 FCGR2CP31995 323 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 ARPC4P59998 168 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 CATR1Q13166 79 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 HSD17B13Q7Z5P4 300 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 CADM3Q8N126 398 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 VN1R17PQ8TDU5 208 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 ZNF436Q9C0F3 470 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 C5orf66Q9H5L9 145 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 PLEKHA2Q9HB19 425 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 CCL28Q9NRJ3 127 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 SSR3Q9UNL2 185 aa13.06□□□□□ -0.32
SNRPA1-202ENST00000394082 UPK2O00526 184 aa13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 ATF4P18848 351 aaPredicted RBP13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 TM4SF20Q53R12 229 aa13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 BTNL8Q6UX41 500 aa13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 UNQ9165/PRO28630Q6UXU0 137 aa13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 RBPMS2Q6ZRY4 209 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 Q6ZWC4 215 aa13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 SPARTQ8N0X7 666 aa13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 OR1L6Q8NGR2 347 aa13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 SECTM1Q8WVN6 248 aa13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 GIMAP1Q8WWP7 306 aa13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 BORCS5Q969J3 196 aa13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 SPAG8Q99932 426 aaPredicted RBP13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 COMMD5Q9GZQ3 224 aa13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 HRASLSQ9HDD0 168 aa13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 S4R3C0 116 aa13.05□□□□□ -0.32
SNRPA1-202ENST00000394082 SCAF4O95104 1147 aaKnown RBP13.04□□□□□ -0.32
SNRPA1-202ENST00000394082 REG1AP05451 166 aa13.04□□□□□ -0.32
SNRPA1-202ENST00000394082 PSMB9P28065 219 aa13.04□□□□□ -0.32
SNRPA1-202ENST00000394082 PLET1Q6UQ28 207 aa13.04□□□□□ -0.32
SNRPA1-202ENST00000394082 SLC38A6Q8IZM9 456 aa13.04□□□□□ -0.32
SNRPA1-202ENST00000394082 OR2C3Q8N628 320 aa13.04□□□□□ -0.32
SNRPA1-202ENST00000394082 GPHA2Q96T91 129 aa13.04□□□□□ -0.32
SNRPA1-202ENST00000394082 QTRT1Q9BXR0 403 aaKnown RBP13.04□□□□□ -0.32
SNRPA1-202ENST00000394082 COMMD9Q9P000 198 aa13.04□□□□□ -0.32
SNRPA1-202ENST00000394082 SULT1C2O00338 296 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 UBE2CO00762 179 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 TSPAN4O14817 238 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 TNFSF12O43508 249 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 GPR183P32249 361 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 SDC2P34741 201 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 CBX5P45973 191 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 APOC4P55056 127 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 TNFRSF9Q07011 255 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 ZNF585BQ52M93 769 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 ZNF773Q6PK81 442 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 GVQW1Q8N7I0 195 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 GDPD1Q8N9F7 314 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 TMEM190Q8WZ59 177 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 LINC00476Q8WZB0 136 aa13.03□□□□□ -0.32
SNRPA1-202ENST00000394082 SLC25A38Q96DW6 304 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms