RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 H2BFWTQ7Z2G1 175 aa10.44□□□□□ -0.74
USP44-202ENST00000393091 LINC01006Q8NI28 216 aa10.44□□□□□ -0.74
USP44-202ENST00000393091 ATP6V0BQ99437 205 aa10.44□□□□□ -0.74
USP44-202ENST00000393091 TEX50A0A1B0GTY4 177 aa10.44□□□□□ -0.74
USP44-202ENST00000393091 A0A1B0GW64 132 aa10.44□□□□□ -0.74
USP44-202ENST00000393091 FCN1O00602 326 aa10.44□□□□□ -0.74
USP44-202ENST00000393091 PRCDQ00LT1 54 aa10.44□□□□□ -0.74
USP44-202ENST00000393091 SMCO1Q147U7 214 aa10.44□□□□□ -0.74
USP44-202ENST00000393091 ASPHD1Q5U4P2 390 aa10.44□□□□□ -0.74
USP44-202ENST00000393091 OR4D5Q8NGN0 318 aa10.44□□□□□ -0.74
USP44-202ENST00000393091 ARPC1AQ92747 370 aa10.44□□□□□ -0.74
USP44-202ENST00000393091 TRAV6A0A075B6T7 132 aa10.43□□□□□ -0.74
USP44-202ENST00000393091 NCBP2LA6PVI3 153 aaKnown RBP10.43□□□□□ -0.74
USP44-202ENST00000393091 IGHG4P01861 327 aa10.43□□□□□ -0.74
USP44-202ENST00000393091 C12orf45Q8N5I9 185 aaPredicted RBP10.43□□□□□ -0.74
USP44-202ENST00000393091 OR5M8Q8NGP6 311 aa10.43□□□□□ -0.74
USP44-202ENST00000393091 FYTTD1Q96QD9 318 aaKnown RBP10.43□□□□□ -0.74
USP44-202ENST00000393091 BEX1Q9HBH7 125 aa10.43□□□□□ -0.74
USP44-202ENST00000393091 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.43□□□□□ -0.74
USP44-202ENST00000393091 NF1P21359 2839 aa10.43□□□□□ -0.74
USP44-202ENST00000393091 HSPE1P61604 102 aaKnown RBP10.43□□□□□ -0.74
USP44-202ENST00000393091 NDPQ00604 133 aa10.43□□□□□ -0.74
USP44-202ENST00000393091 KRTAP24-1Q3LI83 254 aa10.43□□□□□ -0.74
USP44-202ENST00000393091 OR2B11Q5JQS5 317 aa10.43□□□□□ -0.74
USP44-202ENST00000393091 STPG2Q8N412 459 aa10.43□□□□□ -0.74
USP44-202ENST00000393091 FAM110DQ8TAY7 271 aaPredicted RBP10.43□□□□□ -0.74
USP44-202ENST00000393091 TMEM158Q8WZ71 300 aa10.43□□□□□ -0.74
USP44-202ENST00000393091 SPIN2AQ99865 258 aa10.43□□□□□ -0.74
USP44-202ENST00000393091 SPIN2BQ9BPZ2 258 aa10.43□□□□□ -0.74
USP44-202ENST00000393091 CRYBA1P05813 215 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 SULT1A3P0DMM9 295 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 SULT1A4P0DMN0 295 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 TRIM16LQ309B1 348 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 C4orf46Q504U0 113 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 Q6ZRM9 215 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 LYZL2Q7Z4W2 148 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 SLC35E3Q7Z769 313 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 DMBX1Q8NFW5 382 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 OR1L8Q8NGR8 309 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 SPCS3P61009 180 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 FOXE3Q13461 319 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 Q6ZNX1 250 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 Q6ZS46 218 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 CSPG4Q6UVK1 2322 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 TRBV9A0A0B4J1U6 114 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 TRAV3A0A0B4J244 114 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 IGLC7A0M8Q6 106 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 KRASP01116 189 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 VDAC2P45880 294 aaPredicted RBP10.42□□□□□ -0.74
USP44-202ENST00000393091 ID3Q02535 119 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 HNF4GQ14541 408 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 GGNBP1Q5YKI7 109 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.42□□□□□ -0.74
USP44-202ENST00000393091 SRSF12Q8WXF0 261 aaKnown RBP10.42□□□□□ -0.74
USP44-202ENST00000393091 C11orf1Q9H5F2 150 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 FBXO7Q9Y3I1 522 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 ANK2Q01484 3957 aa10.42□□□□□ -0.74
USP44-202ENST00000393091 A0A1W2PN81 502 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 CHRNA7P36544 502 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 RAB25P57735 213 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 FXYD3Q14802 87 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 TATDN3Q17R31 274 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 VKORC1L1Q8N0U8 176 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 OR1L6Q8NGR2 347 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 OR2T6Q8NHC8 308 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 RRNAD1Q96FB5 475 aaKnown RBP10.41□□□□□ -0.74
USP44-202ENST00000393091 SEC22CQ9BRL7 303 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 QTRT1Q9BXR0 403 aaKnown RBP10.41□□□□□ -0.74
USP44-202ENST00000393091 OR51B2Q9Y5P1 312 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 SNAPC5O75971 98 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 ELANEP08246 267 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 TRAPPC2P0DI81 140 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 TRAPPC2BP0DI82 140 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 TMEM267Q0VDI3 215 aaPredicted RBP10.41□□□□□ -0.74
USP44-202ENST00000393091 PJVKQ0ZLH3 352 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 MRPL41Q8IXM3 137 aaKnown RBP10.41□□□□□ -0.74
USP44-202ENST00000393091 NMES1Q9C002 83 aa10.41□□□□□ -0.74
USP44-202ENST00000393091 ATP6V0E1O15342 81 aa10.4□□□□□ -0.74
USP44-202ENST00000393091 VAMP1P23763 118 aa10.4□□□□□ -0.74
USP44-202ENST00000393091 PSMB8P28062 276 aa10.4□□□□□ -0.74
USP44-202ENST00000393091 RPL27AP46776 148 aaKnown RBP10.4□□□□□ -0.74
USP44-202ENST00000393091 TAS2R30P59541 319 aa10.4□□□□□ -0.74
USP44-202ENST00000393091 OR52B4Q8NGK2 314 aa10.4□□□□□ -0.74
USP44-202ENST00000393091 CTRB1P17538 263 aa10.4□□□□□ -0.74
USP44-202ENST00000393091 CTRB2Q6GPI1 263 aa10.4□□□□□ -0.74
USP44-202ENST00000393091 OR4A16Q8NH70 328 aa10.4□□□□□ -0.74
USP44-202ENST00000393091 ZNF747Q9BV97 191 aa10.4□□□□□ -0.74
USP44-202ENST00000393091 TRAV41A0A0B4J266 112 aa10.4□□□□□ -0.75
USP44-202ENST00000393091 RUNX1Q01196 453 aa10.4□□□□□ -0.75
USP44-202ENST00000393091 FAM209BQ5JX69 171 aa10.4□□□□□ -0.75
USP44-202ENST00000393091 ALG5Q9Y673 324 aa10.4□□□□□ -0.75
USP44-202ENST00000393091 ST8SIA3O43173 380 aa10.39□□□□□ -0.75
USP44-202ENST00000393091 KIAA0141Q14154 515 aaPredicted RBP10.39□□□□□ -0.75
USP44-202ENST00000393091 OR2C3Q8N628 320 aa10.39□□□□□ -0.75
USP44-202ENST00000393091 LINC01548A6NM66 108 aa10.39□□□□□ -0.75
USP44-202ENST00000393091 E7EUB6 86 aa10.39□□□□□ -0.75
USP44-202ENST00000393091 IFNA21P01568 189 aa10.39□□□□□ -0.75
USP44-202ENST00000393091 HIST1H1BP16401 226 aaKnown RBP10.39□□□□□ -0.75
USP44-202ENST00000393091 FCGR2BP31994 310 aaPredicted RBP10.39□□□□□ -0.75
USP44-202ENST00000393091 C2orf50Q96LR7 162 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms