RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 PLPP5Q8NEB5 264 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 OR2Z1Q8NG97 314 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 OR4K2Q8NGD2 314 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 OR5AK2Q8NH90 309 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 LGALS14Q8TCE9 139 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 SFXN5Q8TD22 340 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 FRZBQ92765 325 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 NAT6Q93015 286 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 HIST1H2BHQ93079 126 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 PTX4Q96A99 478 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 SLC25A46Q96AG3 418 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 GALMQ96C23 342 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 FLYWCH2Q96CP2 140 aaKnown RBP1.85□□□□□ -2.11
PTPRC-205ENST00000391970 DDIT4LQ96D03 193 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 NEURL3Q96EH8 262 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 OR10C1Q96KK4 312 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 CCDC115Q96NT0 180 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 GPR82Q96P67 336 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 TSPAN32Q96QS1 320 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 MGLLQ99685 303 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 HSD17B10Q99714 261 aaKnown RBP1.85□□□□□ -2.11
PTPRC-205ENST00000391970 HIST1H2BNQ99877 126 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 HIST1H2BMQ99879 126 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 VPS25Q9BRG1 176 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 MIEN1Q9BRT3 115 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 PSMG3Q9BT73 122 aaPredicted RBP1.85□□□□□ -2.11
PTPRC-205ENST00000391970 CDCA4Q9BXL8 241 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 OR2J1Q9GZK6 312 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 CHRNA10Q9GZZ6 450 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 OR51E2Q9H255 320 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 OR52D1Q9H346 318 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 METTL17Q9H7H0 456 aaPredicted RBP1.85□□□□□ -2.11
PTPRC-205ENST00000391970 TMEM242Q9NWH2 141 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 TAS2R8Q9NYW2 309 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 DOK5Q9P104 306 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 CACFD1Q9UGQ2 172 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 HS3ST2Q9Y278 367 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 YARS2Q9Y2Z4 477 aaKnown RBP1.85□□□□□ -2.11
PTPRC-205ENST00000391970 SIGLEC9Q9Y336 463 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 TPRKBQ9Y3C4 175 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 OR51B2Q9Y5P1 312 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 TSSC4Q9Y5U2 329 aaPredicted RBP1.85□□□□□ -2.11
PTPRC-205ENST00000391970 KPTNQ9Y664 436 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 CPAMD8Q8IZJ3 1885 aa1.85□□□□□ -2.11
PTPRC-205ENST00000391970 COL5A3P25940 1745 aaPredicted RBP1.85□□□□□ -2.11
PTPRC-205ENST00000391970 TRBV24-1A0A075B6N3 115 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 A0A087WUU8 490 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 A0A087WX48 190 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 A0A087X0T9 212 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 BORCS7-ASMTA0A0B4J1R7 106 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 IGHV3OR16-9A0A0B4J2B5 98 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 IGHV1-69-2A0A0G2JMI3 117 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 A0A0J9YXV3 536 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 CENPVL3A0A0U1RRI6 287 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 A0A1B0GX51 115 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 C21orf140B9A014 251 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 INMT-MINDY4F8WBC2 141 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 FXYD1O00168 92 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 PLPP1O14494 284 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 ERI3O43414 337 aaKnown RBP1.84□□□□□ -2.11
PTPRC-205ENST00000391970 REM1O75628 298 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 MT-CO2P00403 227 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 CD8AP01732 235 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 HLA-AP01891 365 aaKnown RBP1.84□□□□□ -2.11
PTPRC-205ENST00000391970 APCSP02743 223 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 IL5P05113 134 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 CRYGDP07320 174 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 SOD3P08294 240 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 PGA4P0DJD7 388 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 PGA3P0DJD8 388 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 ESDP10768 282 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF14P17017 642 aaPredicted RBP1.84□□□□□ -2.11
PTPRC-205ENST00000391970 CXCL3P19876 107 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 NFYAP23511 347 aaPredicted RBP1.84□□□□□ -2.11
PTPRC-205ENST00000391970 ATP6V0CP27449 155 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 GABRR2P28476 465 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 SRIP30626 198 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 PFN2P35080 140 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 SNCAP37840 140 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 RBM34P42696 430 aaKnown RBP1.84□□□□□ -2.11
PTPRC-205ENST00000391970 ATP5J2P56134 94 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 YPEL3P61236 119 aaPredicted RBP1.84□□□□□ -2.11
PTPRC-205ENST00000391970 LCN6P62502 163 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 SELENOWP63302 87 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 DEFA5Q01523 94 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 C2orf80Q0P641 193 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 DHRS2Q13268 280 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 ABCA11PQ4W5N1 156 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 TIMM23BQ5SRD1 257 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 LDLRAD2Q5SZI1 272 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF684Q5T5D7 378 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 FAHD1Q6P587 224 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 RPL22L1Q6P5R6 122 aaKnown RBP1.84□□□□□ -2.11
PTPRC-205ENST00000391970 OPN5Q6U736 354 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 WDR82Q6UXN9 313 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 Q6ZSR6 202 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 TMPPEQ6ZT21 453 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 AHSA2Q719I0 299 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 ZNF547Q8IVP9 402 aa1.84□□□□□ -2.11
PTPRC-205ENST00000391970 VKORC1L1Q8N0U8 176 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms