RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 PRSS1P07477 247 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 UCP1P25874 307 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 TUSC1Q2TAM9 212 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 PAQR4Q8N4S7 273 aaPredicted RBP8.61□□□□□ -1.03
PKP4-201ENST00000389757 KLHDC3Q9BQ90 382 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 MRPL32Q9BYC8 188 aaKnown RBP8.61□□□□□ -1.03
PKP4-201ENST00000389757 SAA2-SAA4A0A096LPE2 208 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 TRBV6-7A0A0A0MS04 114 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 TEX50A0A1B0GTY4 177 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 A8MWL6 223 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 PRR32B1ATL7 298 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 SRRM5B3KS81 715 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 ZNF253O75346 499 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 SAA2P0DJI9 122 aaPredicted RBP8.61□□□□□ -1.03
PKP4-201ENST00000389757 CXCL2P19875 107 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 VDAC2P45880 294 aaPredicted RBP8.61□□□□□ -1.03
PKP4-201ENST00000389757 PRB3Q04118 309 aaPredicted RBP8.61□□□□□ -1.03
PKP4-201ENST00000389757 SMAGPQ0VAQ4 97 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 PRR30Q53SZ7 412 aaPredicted RBP8.61□□□□□ -1.03
PKP4-201ENST00000389757 STPG2Q8N412 459 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 GATAD1Q8WUU5 269 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 GTF3AQ92664 365 aaKnown RBP8.61□□□□□ -1.03
PKP4-201ENST00000389757 IFI27L2Q9H2X8 130 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 SMDT1Q9H4I9 107 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 FBLN5Q9UBX5 448 aa8.61□□□□□ -1.03
PKP4-201ENST00000389757 IGHV3-23P01764 117 aa8.6□□□□□ -1.03
PKP4-201ENST00000389757 IGFL3Q6UXB1 125 aa8.6□□□□□ -1.03
PKP4-201ENST00000389757 ZNF497Q6ZNH5 498 aa8.6□□□□□ -1.03
PKP4-201ENST00000389757 EIF4E3Q8N5X7 224 aaKnown RBP8.6□□□□□ -1.03
PKP4-201ENST00000389757 IGHV3OR16-13A0A075B7E8 117 aa8.6□□□□□ -1.03
PKP4-201ENST00000389757 IGHV3-74A0A0B4J1X5 117 aa8.6□□□□□ -1.03
PKP4-201ENST00000389757 CRISP2P16562 243 aa8.6□□□□□ -1.03
PKP4-201ENST00000389757 TUBA4BQ9H853 241 aa8.6□□□□□ -1.03
PKP4-201ENST00000389757 TRAV24A0A0B4J272 114 aa8.6□□□□□ -1.03
PKP4-201ENST00000389757 RAB24Q969Q5 203 aa8.6□□□□□ -1.03
PKP4-201ENST00000389757 NDUFB4O95168 129 aa8.6□□□□□ -1.03
PKP4-201ENST00000389757 TFF1P04155 84 aa8.6□□□□□ -1.03
PKP4-201ENST00000389757 Q1RN00 199 aa8.6□□□□□ -1.03
PKP4-201ENST00000389757 ZNF474Q6S9Z5 364 aaPredicted RBP8.6□□□□□ -1.03
PKP4-201ENST00000389757 GALNT14Q96FL9 552 aa8.6□□□□□ -1.03
PKP4-201ENST00000389757 S4R3C0 116 aa8.6□□□□□ -1.03
PKP4-201ENST00000389757 A0A1W2PRX2 142 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 MSGN1A6NI15 193 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 B4DSR2 109 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 GPR183P32249 361 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 MAS1LP35410 378 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 MEF2BQ02080 365 aaPredicted RBP8.59□□□□□ -1.03
PKP4-201ENST00000389757 MORN2Q502X0 79 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 ZNF880Q6PDB4 577 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 DHRS11Q6UWP2 260 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 DOCK8Q8NF50 2099 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 GPX1P07203 203 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 CYP2G1PQ6ZSU1 146 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 DTX1Q86Y01 620 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 C1QL1O75973 258 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 NUTF2P61970 127 aaKnown RBP8.59□□□□□ -1.03
PKP4-201ENST00000389757 TWIST1Q15672 202 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 TNFRSF14Q92956 283 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 FOXA2Q9Y261 457 aaPredicted RBP8.59□□□□□ -1.03
PKP4-201ENST00000389757 C7orf77A4D0Y5 90 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 CRIM1Q9NZV1 1036 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 TMEM178BH3BS89 294 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 NCMAPQ5T1S8 102 aa8.59□□□□□ -1.03
PKP4-201ENST00000389757 H3BTX0 84 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 SAA1P0DJI8 122 aaPredicted RBP8.58□□□□□ -1.04
PKP4-201ENST00000389757 ARL14EPLP0DKL9 152 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 IER3P46695 156 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 HIST1H1AQ02539 215 aaPredicted RBP8.58□□□□□ -1.04
PKP4-201ENST00000389757 HIST3H3Q16695 136 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 TOMM20LQ6UXN7 152 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 IGHV3-49A0A0A0MS15 119 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 IGHV3-11P01762 117 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 H2BFSP57053 126 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 SP5Q6BEB4 398 aaPredicted RBP8.58□□□□□ -1.04
PKP4-201ENST00000389757 CLEC19AQ6UXS0 136 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 Q6ZN92 141 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 NBASA2RRP1 2371 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 J3QRE1 110 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 M0R2Z0 102 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 CX3CL1P78423 397 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 TCF15Q12870 199 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 FAM166AQ6J272 317 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 CYB561D1Q8N8Q1 229 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 GGACTQ9BVM4 153 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 PEMTQ9UBM1 199 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 SNURFLB1AK76 121 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 ZNF207O43670 478 aaKnown RBP8.58□□□□□ -1.04
PKP4-201ENST00000389757 IGKV3-15P01624 115 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 MFAP2P55001 183 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 SIGIRRQ6IA17 410 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 LINC00305Q7Z4B0 112 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 VAMP8Q9BV40 100 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 WNT10AQ9GZT5 417 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 A0A087WV48 116 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 FAM181BA6NEQ2 426 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 G0S2P27469 103 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 WDR25Q64LD2 544 aaPredicted RBP8.58□□□□□ -1.04
PKP4-201ENST00000389757 ANGPTL6Q8NI99 470 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 PHLDA3Q9Y5J5 127 aa8.58□□□□□ -1.04
PKP4-201ENST00000389757 APCSP02743 223 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms