RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 C1QL2Q7Z5L3 287 aa13.19□□□□□ -0.3
ALK-201ENST00000389048 JMJD8Q96S16 334 aa13.19□□□□□ -0.3
ALK-201ENST00000389048 C2orf88Q9BSF0 95 aa13.19□□□□□ -0.3
ALK-201ENST00000389048 ALX4Q9H161 411 aaPredicted RBP13.19□□□□□ -0.3
ALK-201ENST00000389048 ARID1AO14497 2285 aa13.19□□□□□ -0.3
ALK-201ENST00000389048 PRR33A8MZF0 331 aa13.18□□□□□ -0.3
ALK-201ENST00000389048 ASIPP42127 132 aa13.18□□□□□ -0.3
ALK-201ENST00000389048 NPCDR1Q9BY65 106 aa13.18□□□□□ -0.3
ALK-201ENST00000389048 MIR17HGQ75NE6 70 aa13.18□□□□□ -0.3
ALK-201ENST00000389048 DICER1Q9UPY3 1922 aaKnown RBP13.18□□□□□ -0.3
ALK-201ENST00000389048 TBX6O95947 436 aaPredicted RBP13.18□□□□□ -0.3
ALK-201ENST00000389048 MALP21145 153 aa13.18□□□□□ -0.3
ALK-201ENST00000389048 TSPOP30536 169 aa13.18□□□□□ -0.3
ALK-201ENST00000389048 STARD6P59095 220 aa13.18□□□□□ -0.3
ALK-201ENST00000389048 PCOLCEQ15113 449 aa13.18□□□□□ -0.3
ALK-201ENST00000389048 C11orf44Q8N8P7 122 aa13.18□□□□□ -0.3
ALK-201ENST00000389048 RNASE7Q9H1E1 156 aaKnown RBP13.18□□□□□ -0.3
ALK-201ENST00000389048 TRAV30A0A087WSZ9 112 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 NPIPB4C9JG80 1138 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 CTSSP25774 331 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 TSPAN7P41732 249 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 C2orf68Q2NKX9 166 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 TXNDC17Q9BRA2 123 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 DOCK5Q9H7D0 1870 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 HOXA5P20719 270 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 NHLRC3Q5JS37 347 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 CELA3AP09093 270 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 ZNF146Q15072 292 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 MAJINQ3KP22 176 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 Q96M66 194 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 DOCK1Q14185 1865 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 SCN9AQ15858 1988 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 MSGN1A6NI15 193 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 POC1AQ8NBT0 407 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 SMDT1Q9H4I9 107 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 BRWD1Q9NSI6 2320 aa13.17□□□□□ -0.3
ALK-201ENST00000389048 A0A1W2PQM1 296 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 RAMP1O60894 148 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 ATRAIDQ6UW56 229 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 ANAPC13Q9BS18 74 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 AICDAQ9GZX7 198 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 TMEM74BQ9NUR3 256 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 FBXL7Q9UJT9 491 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 RNF115Q9Y4L5 304 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 LSM4Q9Y4Z0 139 aaKnown RBP13.16□□□□□ -0.3
ALK-201ENST00000389048 COL22A1Q8NFW1 1626 aaPredicted RBP13.16□□□□□ -0.3
ALK-201ENST00000389048 CNTFRP26992 372 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 SEMA5BQ9P283 1151 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 SMCHD1A6NHR9 2005 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 TRGV2A0A075B6R0 118 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 PRR19A6NJB7 356 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 ZNF708P17019 499 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 CLDND2Q8NHS1 167 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 TRAV2A0A0B4J234 112 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 GCM2O75603 506 aaPredicted RBP13.16□□□□□ -0.3
ALK-201ENST00000389048 TBR1Q16650 682 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 RREB1Q92766 1687 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 TRPM6Q9BX84 2022 aa13.16□□□□□ -0.3
ALK-201ENST00000389048 MDC1Q14676 2089 aaKnown RBP13.15□□□□□ -0.3
ALK-201ENST00000389048 C17orf98A8MV24 154 aa13.15□□□□□ -0.3
ALK-201ENST00000389048 TTC9CQ8N5M4 171 aa13.15□□□□□ -0.3
ALK-201ENST00000389048 OR9G1Q8NH87 305 aa13.15□□□□□ -0.3
ALK-201ENST00000389048 FGF11Q92914 225 aa13.15□□□□□ -0.3
ALK-201ENST00000389048 SMIM8Q96KF7 97 aa13.15□□□□□ -0.3
ALK-201ENST00000389048 ADMP35318 185 aa13.15□□□□□ -0.3
ALK-201ENST00000389048 PAX2Q02962 417 aa13.15□□□□□ -0.3
ALK-201ENST00000389048 SMRP1Q8NCR6 262 aa13.15□□□□□ -0.3
ALK-201ENST00000389048 JPT1Q9UK76 154 aa13.15□□□□□ -0.3
ALK-201ENST00000389048 TNFSF10P50591 281 aa13.15□□□□□ -0.3
ALK-201ENST00000389048 FAM27E3Q08E93 113 aa13.15□□□□□ -0.3
ALK-201ENST00000389048 IL36BQ9NZH7 164 aa13.15□□□□□ -0.3
ALK-201ENST00000389048 TRBV5-7A0A0A0MS05 114 aa13.15□□□□□ -0.31
ALK-201ENST00000389048 CFAP161Q6P656 301 aa13.15□□□□□ -0.31
ALK-201ENST00000389048 RPRMQ9NS64 109 aa13.15□□□□□ -0.31
ALK-201ENST00000389048 NHP2Q9NX24 153 aaKnown RBP13.15□□□□□ -0.31
ALK-201ENST00000389048 KIAA1551Q9HCM1 1747 aa13.15□□□□□ -0.31
ALK-201ENST00000389048 SRSF3P84103 164 aaKnown RBP13.14□□□□□ -0.31
ALK-201ENST00000389048 SLC25A45Q8N413 288 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 NAA38Q9BRA0 125 aaKnown RBP13.14□□□□□ -0.31
ALK-201ENST00000389048 PKD1L3Q7Z443 1732 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 TMEM50AO95807 157 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 LIPFP07098 398 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 C3orf36Q3SXR2 165 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 FAM89BQ8N5H3 189 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 RCC1LQ96I51 464 aaKnown RBP13.14□□□□□ -0.31
ALK-201ENST00000389048 SDHCQ99643 169 aaPredicted RBP13.14□□□□□ -0.31
ALK-201ENST00000389048 SCN2AQ99250 2005 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 SCN8AQ9UQD0 1980 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 TIAF1O95411 115 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 NBEAP1P0C6P0 100 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 FBLN7Q53RD9 439 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 C1orf122Q6ZSJ8 110 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 WDYHV1Q96HA8 205 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 FAM216BQ8N7L0 139 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 GATAD1Q8WUU5 269 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 COX6A1P12074 109 aa13.14□□□□□ -0.31
ALK-201ENST00000389048 LURAP1LQ8IV03 231 aa13.13□□□□□ -0.31
ALK-201ENST00000389048 MRPL32Q9BYC8 188 aaKnown RBP13.13□□□□□ -0.31
ALK-201ENST00000389048 AHRRA9YTQ3 701 aa13.13□□□□□ -0.31
ALK-201ENST00000389048 RFPL3SP0C7P2 107 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms