RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 GAL3ST2Q9H3Q3 398 aa9.92□□□□□ -0.82
HMGCL-202ENST00000374487 LINC00574Q9H8X3 128 aa9.92□□□□□ -0.82
HMGCL-202ENST00000374487 RPUSD1Q9UJJ7 312 aaKnown RBP9.92□□□□□ -0.82
HMGCL-202ENST00000374487 LINC00312Q9Y6C7 94 aa9.92□□□□□ -0.82
HMGCL-202ENST00000374487 DSCAMO60469 2012 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 PPIAL4EA0A075B759 164 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 hCG_1809904A0A1W2PP81 198 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 A0A1W2PR64 198 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 A0A1W2PRV1 198 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 PPIAL4DF5H284 164 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 CYB5BO43169 146 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 HRASP01112 189 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 IFNA4P05014 189 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 PPIAL4FP0DN26 164 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 OR4A47Q6IF82 309 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 ZNF383Q8NA42 475 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 ZNF439Q8NDP4 499 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 RNASE6Q93091 150 aaKnown RBP9.91□□□□□ -0.82
HMGCL-202ENST00000374487 DYNLRB1Q9NP97 96 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 ENY2Q9NPA8 101 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 TCF19Q9Y242 345 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 PPIAL4AQ9Y536 164 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 DOCK11Q5JSL3 2073 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 C15orf61A6NNL5 157 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 ZNF727A8MUV8 499 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 RRHO14718 337 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 VDAC2P45880 294 aaPredicted RBP9.91□□□□□ -0.82
HMGCL-202ENST00000374487 PSMB3P49720 205 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 MEF2CQ06413 473 aaPredicted RBP9.91□□□□□ -0.82
HMGCL-202ENST00000374487 HABP2Q14520 560 aaPredicted RBP9.91□□□□□ -0.82
HMGCL-202ENST00000374487 ACOT6Q3I5F7 207 aaPredicted RBP9.91□□□□□ -0.82
HMGCL-202ENST00000374487 PDLIM3Q53GG5 364 aaPredicted RBP9.91□□□□□ -0.82
HMGCL-202ENST00000374487 ABHD12Q8N2K0 398 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 NRGNQ92686 78 aa9.91□□□□□ -0.82
HMGCL-202ENST00000374487 TACC2O95359 2948 aa9.9□□□□□ -0.82
HMGCL-202ENST00000374487 A0A087WWC5 75 aa9.9□□□□□ -0.82
HMGCL-202ENST00000374487 TMEM178BH3BS89 294 aa9.9□□□□□ -0.82
HMGCL-202ENST00000374487 S100A6P06703 90 aa9.9□□□□□ -0.82
HMGCL-202ENST00000374487 PMS2P11Q13670 270 aa9.9□□□□□ -0.82
HMGCL-202ENST00000374487 RTL8BQ17RB0 113 aa9.9□□□□□ -0.82
HMGCL-202ENST00000374487 FAM90A2PQ658T7 463 aa9.9□□□□□ -0.82
HMGCL-202ENST00000374487 SLC25A48Q6ZT89 311 aaKnown RBP9.9□□□□□ -0.82
HMGCL-202ENST00000374487 RAB24Q969Q5 203 aa9.9□□□□□ -0.82
HMGCL-202ENST00000374487 TMPRSS5Q9H3S3 457 aa9.9□□□□□ -0.82
HMGCL-202ENST00000374487 WDR83OSQ9Y284 106 aa9.9□□□□□ -0.82
HMGCL-202ENST00000374487 ITPR2Q14571 2701 aa9.9□□□□□ -0.82
HMGCL-202ENST00000374487 DYSFO75923 2080 aa9.9□□□□□ -0.82
HMGCL-202ENST00000374487 B4DEV8 164 aa9.9□□□□□ -0.83
HMGCL-202ENST00000374487 MDKP21741 143 aaPredicted RBP9.9□□□□□ -0.83
HMGCL-202ENST00000374487 ERVFRD-1P60508 538 aa9.9□□□□□ -0.83
HMGCL-202ENST00000374487 HSPE1P61604 102 aaKnown RBP9.9□□□□□ -0.83
HMGCL-202ENST00000374487 MEF2BQ02080 365 aaPredicted RBP9.9□□□□□ -0.83
HMGCL-202ENST00000374487 PNRC1Q12796 327 aaPredicted RBP9.9□□□□□ -0.83
HMGCL-202ENST00000374487 FBXL19-AS1Q494R0 122 aa9.9□□□□□ -0.83
HMGCL-202ENST00000374487 H1FXQ92522 213 aaKnown RBP9.9□□□□□ -0.83
HMGCL-202ENST00000374487 ZNF714Q96N38 554 aa9.9□□□□□ -0.83
HMGCL-202ENST00000374487 SPOCK3Q9BQ16 436 aa9.9□□□□□ -0.83
HMGCL-202ENST00000374487 GGACTQ9BVM4 153 aa9.9□□□□□ -0.83
HMGCL-202ENST00000374487 HINT2Q9BX68 163 aa9.9□□□□□ -0.83
HMGCL-202ENST00000374487 TMEM106BQ9NUM4 274 aa9.9□□□□□ -0.83
HMGCL-202ENST00000374487 NDUFB3O43676 98 aa9.89□□□□□ -0.83
HMGCL-202ENST00000374487 MPDU1O75352 247 aa9.89□□□□□ -0.83
HMGCL-202ENST00000374487 RPL35P42766 123 aaKnown RBP9.89□□□□□ -0.83
HMGCL-202ENST00000374487 OR10A7Q8NGE5 316 aa9.89□□□□□ -0.83
HMGCL-202ENST00000374487 MS4A5Q9H3V2 200 aa9.89□□□□□ -0.83
HMGCL-202ENST00000374487 SIRT7Q9NRC8 400 aa9.89□□□□□ -0.83
HMGCL-202ENST00000374487 SLC35D1Q9NTN3 355 aa9.89□□□□□ -0.83
HMGCL-202ENST00000374487 TMEM14BQ9NUH8 114 aa9.89□□□□□ -0.83
HMGCL-202ENST00000374487 FOXA2Q9Y261 457 aaPredicted RBP9.89□□□□□ -0.83
HMGCL-202ENST00000374487 NDUFA2O43678 99 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 CT45A6P0DMU7 189 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 CT45A5P0DMU8 189 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 CT45A7P0DMV0 189 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 CDC34P49427 236 aaPredicted RBP9.88□□□□□ -0.83
HMGCL-202ENST00000374487 LRRC10Q5BKY1 277 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 TMEM200BQ69YZ2 307 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 OR13D1Q8NGV5 346 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 MANBALQ9NQG1 85 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 ZNRD1Q9P1U0 126 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 OR51B2Q9Y5P1 312 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 URGCP-MRPS24S4R325 110 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 APCP25054 2843 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 HRNRQ86YZ3 2850 aaPredicted RBP9.88□□□□□ -0.83
HMGCL-202ENST00000374487 A0A1W2PPV4 95 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 CXorf65A6NEN9 183 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 SHISA9B4DS77 424 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 E7EQL1 145 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 SIAH2O43255 324 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 SOX15O60248 233 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 IGKV1-16P04430 117 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 CCL3L1P16619 93 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 SNRPEP62304 92 aaKnown RBP9.88□□□□□ -0.83
HMGCL-202ENST00000374487 NCMAPQ5T1S8 102 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 TREML4Q6UXN2 200 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 HEPN1Q6WQI6 88 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 SLC24A4Q8NFF2 622 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 PRNDQ9UKY0 176 aa9.88□□□□□ -0.83
HMGCL-202ENST00000374487 LRBAP50851 2863 aa9.87□□□□□ -0.83
HMGCL-202ENST00000374487 RAI1Q7Z5J4 1906 aaPredicted RBP9.87□□□□□ -0.83
HMGCL-202ENST00000374487 A0A1W2PPR1 153 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms