RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 GNG4P50150 75 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 RPL8P62917 257 aaKnown RBP11.28□□□□□ -0.6
CLIC4-201ENST00000374379 MMDQ15546 238 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 RAB1BQ9H0U4 201 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 TMEM106BQ9NUM4 274 aa11.28□□□□□ -0.6
CLIC4-201ENST00000374379 CRIP3Q6Q6R5 217 aa11.27□□□□□ -0.6
CLIC4-201ENST00000374379 MUC15Q8N387 334 aa11.27□□□□□ -0.6
CLIC4-201ENST00000374379 RAB1CQ92928 201 aa11.27□□□□□ -0.6
CLIC4-201ENST00000374379 XKRY2A2RUG3 117 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 CD5P06127 495 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 CLDND2Q8NHS1 167 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 VSTM2AQ8TAG5 236 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 NEUROG1Q92886 237 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 PCGF1Q9BSM1 259 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 PRO1933Q9H354 126 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 ATG2AQ2TAZ0 1938 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 IGHV1-69-2A0A0G2JMI3 117 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 LOC102723971A0A1B0GUV8 181 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 TSTD3H0UI37 97 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 H0Y8G0 127 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 RRHO14718 337 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 CTRB1P17538 263 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 CTRB2Q6GPI1 263 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 Q6ZS92 163 aa11.27□□□□□ -0.61
CLIC4-201ENST00000374379 KBTBD11O94819 623 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 ICAM4Q14773 271 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 CTDSP1Q9GZU7 261 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 A0A0G2JNJ9 132 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 SLC25A5P05141 298 aaKnown RBP11.26□□□□□ -0.61
CLIC4-201ENST00000374379 LYL1P12980 280 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 RANP62826 216 aaKnown RBP11.26□□□□□ -0.61
CLIC4-201ENST00000374379 MRPL20Q9BYC9 149 aaKnown RBP11.26□□□□□ -0.61
CLIC4-201ENST00000374379 ZNF331Q9NQX6 463 aaPredicted RBP11.26□□□□□ -0.61
CLIC4-201ENST00000374379 Q9UFV3 132 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 IGKV1-39P01597 117 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 IGKV1D-39P04432 117 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 PRB4P10163 310 aaPredicted RBP11.26□□□□□ -0.61
CLIC4-201ENST00000374379 DEFA6Q01524 100 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 GAMTQ14353 236 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 TCTEX1D1Q8N7M0 179 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 NHLRC2Q8NBF2 726 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 SGMS2Q8NHU3 365 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.26□□□□□ -0.61
CLIC4-201ENST00000374379 ZNF729A6NN14 1252 aaPredicted RBP11.26□□□□□ -0.61
CLIC4-201ENST00000374379 LY6HO94772 140 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 ZNF506Q5JVG8 444 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 DPPA3Q6W0C5 159 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 OR8B3Q8NGG8 313 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 WFIKKN1Q96NZ8 548 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 OR8B2Q96RD0 313 aa11.26□□□□□ -0.61
CLIC4-201ENST00000374379 A0A1W2PN81 502 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 PGPEP1LA6NFU8 196 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 LINC00869P0C866 280 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 IGFBP2P18065 325 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 ATP5G3P48201 142 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 OR10G8Q8NGN5 311 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 RNF115Q9Y4L5 304 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 MBD3L4A6NDZ8 208 aaPredicted RBP11.25□□□□□ -0.61
CLIC4-201ENST00000374379 MBD3L3A6NE82 208 aaPredicted RBP11.25□□□□□ -0.61
CLIC4-201ENST00000374379 MBD3L5A6NJ08 208 aaPredicted RBP11.25□□□□□ -0.61
CLIC4-201ENST00000374379 CXorf1O96002 111 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 CD24P25063 80 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 CNN1P51911 297 aaKnown RBP11.25□□□□□ -0.61
CLIC4-201ENST00000374379 RND2P52198 227 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 DLX1P56177 255 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 IL15RAQ13261 267 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 MBD3L2Q8NHZ7 208 aaPredicted RBP11.25□□□□□ -0.61
CLIC4-201ENST00000374379 TECRQ9NZ01 308 aaKnown RBP11.25□□□□□ -0.61
CLIC4-201ENST00000374379 TRAV20A0A0B4J274 112 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 PIP4P1Q86T03 277 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 STPG3Q8N7X2 389 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 PSMG3Q9BT73 122 aaPredicted RBP11.25□□□□□ -0.61
CLIC4-201ENST00000374379 SMDT1Q9H4I9 107 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 NAT8BQ9UHF3 227 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 S4R3C0 116 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 FRYLO94915 3013 aa11.25□□□□□ -0.61
CLIC4-201ENST00000374379 CAMPP49913 170 aa11.24□□□□□ -0.61
CLIC4-201ENST00000374379 TMPRSS3P57727 454 aa11.24□□□□□ -0.61
CLIC4-201ENST00000374379 C10orf55Q5SWW7 151 aa11.24□□□□□ -0.61
CLIC4-201ENST00000374379 SPTBN5Q9NRC6 3674 aaKnown RBP11.24□□□□□ -0.61
CLIC4-201ENST00000374379 PLXNB1O43157 2135 aa11.24□□□□□ -0.61
CLIC4-201ENST00000374379 PMS2P11Q13670 270 aa11.24□□□□□ -0.61
CLIC4-201ENST00000374379 MRPL54Q6P161 138 aaKnown RBP11.24□□□□□ -0.61
CLIC4-201ENST00000374379 RPP25LQ8N5L8 163 aaKnown RBP11.24□□□□□ -0.61
CLIC4-201ENST00000374379 OR5B3Q8NH48 314 aa11.24□□□□□ -0.61
CLIC4-201ENST00000374379 NPIPB3Q92617 1050 aa11.24□□□□□ -0.61
CLIC4-201ENST00000374379 GPR61Q9BZJ8 451 aa11.24□□□□□ -0.61
CLIC4-201ENST00000374379 C1QTNF9BB2RNN3 333 aa11.24□□□□□ -0.61
CLIC4-201ENST00000374379 FCN1O00602 326 aa11.24□□□□□ -0.61
CLIC4-201ENST00000374379 SCGB2A1O75556 95 aa11.23□□□□□ -0.61
CLIC4-201ENST00000374379 SPRNQ5BIV9 151 aa11.23□□□□□ -0.61
CLIC4-201ENST00000374379 MBNL2Q5VZF2 373 aaKnown RBP11.23□□□□□ -0.61
CLIC4-201ENST00000374379 Q6ZPA2 131 aa11.23□□□□□ -0.61
CLIC4-201ENST00000374379 ASCL5Q7RTU5 278 aa11.23□□□□□ -0.61
CLIC4-201ENST00000374379 FAM215AQ9Y5M1 114 aa11.23□□□□□ -0.61
CLIC4-201ENST00000374379 HELTA6NFD8 242 aa11.23□□□□□ -0.61
CLIC4-201ENST00000374379 LY86O95711 162 aa11.23□□□□□ -0.61
CLIC4-201ENST00000374379 PAX9P55771 341 aa11.23□□□□□ -0.61
CLIC4-201ENST00000374379 RPL11P62913 178 aaKnown RBP11.23□□□□□ -0.61
CLIC4-201ENST00000374379 OR10W1Q8NGF6 305 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms