RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 LYRM2Q9NU23 88 aaPredicted RBP7.79□□□□□ -1.16
PTPN20-202ENST00000374339 KIAA1456Q9P272 454 aa7.79□□□□□ -1.16
PTPN20-202ENST00000374339 OR51B2Q9Y5P1 312 aa7.79□□□□□ -1.16
PTPN20-202ENST00000374339 FASNP49327 2511 aaKnown RBP7.79□□□□□ -1.16
PTPN20-202ENST00000374339 KANTRA0A1W2PQU2 76 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 TAAR5O14804 337 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 NBR2O15453 112 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 ACTL6BO94805 426 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 FBP1P09467 338 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 IGHV4-38-2P0DP08 117 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 HKR1P10072 659 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 BAXQ07812 192 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 PLGLAQ15195 96 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 MMDQ15546 238 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 BRD3OSQ6XYD6 125 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 PPP1R27Q86WC6 154 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 STX12Q86Y82 276 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 MRPL41Q8IXM3 137 aaKnown RBP7.78□□□□□ -1.16
PTPN20-202ENST00000374339 NPBQ8NG41 125 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 C17orf50Q8WW18 174 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 AJUBAQ96IF1 538 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 EAF1Q96JC9 268 aaPredicted RBP7.78□□□□□ -1.16
PTPN20-202ENST00000374339 GON7Q9BXV9 100 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 MEGF9Q9H1U4 602 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 C11orf1Q9H5F2 150 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 ZNF430Q9H8G1 570 aaPredicted RBP7.78□□□□□ -1.16
PTPN20-202ENST00000374339 PSENENQ9NZ42 101 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 C1RLQ9NZP8 487 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 METTL1Q9UBP6 276 aaKnown RBP7.78□□□□□ -1.16
PTPN20-202ENST00000374339 ITGB1BP2Q9UKP3 347 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 TCF19Q9Y242 345 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 SIGLEC9Q9Y336 463 aa7.78□□□□□ -1.16
PTPN20-202ENST00000374339 PRRC2AP48634 2157 aaKnown RBP7.78□□□□□ -1.16
PTPN20-202ENST00000374339 MAP1AP78559 2803 aaPredicted RBP7.77□□□□□ -1.17
PTPN20-202ENST00000374339 IGHV3OR16-10A0A075B7F0 116 aa7.77□□□□□ -1.17
PTPN20-202ENST00000374339 TRAV3A0A0B4J244 114 aa7.77□□□□□ -1.17
PTPN20-202ENST00000374339 RRHO14718 337 aa7.77□□□□□ -1.17
PTPN20-202ENST00000374339 BCL2L11O43521 198 aa7.77□□□□□ -1.17
PTPN20-202ENST00000374339 NDUFA3O95167 84 aa7.77□□□□□ -1.17
PTPN20-202ENST00000374339 IAPPP10997 89 aa7.77□□□□□ -1.17
PTPN20-202ENST00000374339 TMEM11P17152 192 aa7.77□□□□□ -1.17
PTPN20-202ENST00000374339 HOXA1P49639 335 aaPredicted RBP7.77□□□□□ -1.17
PTPN20-202ENST00000374339 PRCDQ00LT1 54 aa7.77□□□□□ -1.17
PTPN20-202ENST00000374339 OPCMLQ14982 345 aa7.77□□□□□ -1.17
PTPN20-202ENST00000374339 AANATQ16613 207 aa7.77□□□□□ -1.17
PTPN20-202ENST00000374339 PRSS8Q16651 343 aa7.77□□□□□ -1.17
PTPN20-202ENST00000374339 KLF17Q5JT82 389 aaPredicted RBP7.77□□□□□ -1.17
PTPN20-202ENST00000374339 RUSC1-AS1Q66K80 236 aa7.77□□□□□ -1.17
PTPN20-202ENST00000374339 OR1L8Q8NGR8 309 aa7.77□□□□□ -1.17
PTPN20-202ENST00000374339 ARPC5LQ9BPX5 153 aa7.77□□□□□ -1.17
PTPN20-202ENST00000374339 HEYLQ9NQ87 328 aaPredicted RBP7.77□□□□□ -1.17
PTPN20-202ENST00000374339 PLSCR3Q9NRY6 295 aa7.77□□□□□ -1.17
PTPN20-202ENST00000374339 STRAPQ9Y3F4 350 aaKnown RBP7.77□□□□□ -1.17
PTPN20-202ENST00000374339 MED13LQ71F56 2210 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 ITPR2Q14571 2701 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 A0A0U1RQK1 487 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 TEX50A0A1B0GTY4 177 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 A0A1W2PN81 502 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 MSGN1A6NI15 193 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 SMAD7O15105 426 aaKnown RBP7.76□□□□□ -1.17
PTPN20-202ENST00000374339 CRYGBP07316 175 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 CHRNA7P36544 502 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 SULT1A1P50225 295 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 F2RL1P55085 397 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 PAX9P55771 341 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 ATP5IP56385 69 aaPredicted RBP7.76□□□□□ -1.17
PTPN20-202ENST00000374339 EIF5AP63241 154 aaKnown RBP7.76□□□□□ -1.17
PTPN20-202ENST00000374339 HBG1P69891 147 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 HBG2P69892 147 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 EWSR1Q01844 656 aaKnown RBP eCLIP7.76□□□□□ -1.17
PTPN20-202ENST00000374339 HNF4GQ14541 408 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 LRRC75BQ2VPJ9 315 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 Q8N6K4 173 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 TMEM252Q8N6L7 170 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 RITA1Q96K30 269 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 SLA2Q9H6Q3 261 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 PLEKHA3Q9HB20 300 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 U3KQ87 197 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 HECTD1Q9ULT8 2610 aa7.76□□□□□ -1.17
PTPN20-202ENST00000374339 IGSF23A1L1A6 192 aa7.75□□□□□ -1.17
PTPN20-202ENST00000374339 NCBP2LA6PVI3 153 aaKnown RBP7.75□□□□□ -1.17
PTPN20-202ENST00000374339 INS-IGF2F8WCM5 200 aa7.75□□□□□ -1.17
PTPN20-202ENST00000374339 H3BP45 60 aa7.75□□□□□ -1.17
PTPN20-202ENST00000374339 KCNAB3O43448 404 aa7.75□□□□□ -1.17
PTPN20-202ENST00000374339 TMEM50AO95807 157 aa7.75□□□□□ -1.17
PTPN20-202ENST00000374339 FSHBP01225 129 aa7.75□□□□□ -1.17
PTPN20-202ENST00000374339 CD24P25063 80 aa7.75□□□□□ -1.17
PTPN20-202ENST00000374339 CNTFRP26992 372 aa7.75□□□□□ -1.17
PTPN20-202ENST00000374339 COMPP49747 757 aaPredicted RBP7.75□□□□□ -1.17
PTPN20-202ENST00000374339 TNXAQ16473 311 aa7.75□□□□□ -1.17
PTPN20-202ENST00000374339 C5orf64Q2M2E5 130 aa7.75□□□□□ -1.17
PTPN20-202ENST00000374339 SPANXN5Q5MJ07 72 aa7.75□□□□□ -1.17
PTPN20-202ENST00000374339 C9orf139Q6ZV77 190 aa7.75□□□□□ -1.17
PTPN20-202ENST00000374339 HSD17B13Q7Z5P4 300 aaPredicted RBP7.75□□□□□ -1.17
PTPN20-202ENST00000374339 SLC51BQ86UW2 128 aa7.75□□□□□ -1.17
PTPN20-202ENST00000374339 CIARTQ8N365 385 aaPredicted RBP7.75□□□□□ -1.17
PTPN20-202ENST00000374339 RBMXL1Q96E39 390 aaKnown RBP7.75□□□□□ -1.17
PTPN20-202ENST00000374339 HINT2Q9BX68 163 aa7.75□□□□□ -1.17
PTPN20-202ENST00000374339 FBXL15Q9H469 300 aa7.75□□□□□ -1.17
PTPN20-202ENST00000374339 NDUFA4L2Q9NRX3 87 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms