RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 OR9G9P0C7N8 305 aa13.17□□□□□ -0.3
PABPC4-202ENST00000372857 NTF3P20783 257 aa13.17□□□□□ -0.3
PABPC4-202ENST00000372857 CDKN1BP46527 198 aa13.17□□□□□ -0.3
PABPC4-202ENST00000372857 ZNF83P51522 516 aa13.17□□□□□ -0.3
PABPC4-202ENST00000372857 PLP2Q04941 152 aa13.17□□□□□ -0.3
PABPC4-202ENST00000372857 NKX6-3A6NJ46 265 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 MT-CO3P00414 261 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 C3orf79P0CE67 100 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 KLF3P57682 345 aaPredicted RBP13.16□□□□□ -0.3
PABPC4-202ENST00000372857 AESQ08117 197 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 ZNF718Q3SXZ3 478 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 LINC00696Q6ZRV3 163 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 TPRX1Q8N7U7 411 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 EAF1Q96JC9 268 aaPredicted RBP13.16□□□□□ -0.3
PABPC4-202ENST00000372857 GGTLC1Q9BX51 225 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 SEPSECSQ9HD40 501 aaKnown RBP13.16□□□□□ -0.3
PABPC4-202ENST00000372857 GRPP07492 148 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 GCHFRP30047 84 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 LTC4SQ16873 150 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 DOLPP1Q86YN1 238 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 RFESDQ8TAC1 157 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 MRGPRDQ8TDS7 321 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 FAM234AQ9H0X4 552 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 RNASE7Q9H1E1 156 aaKnown RBP13.16□□□□□ -0.3
PABPC4-202ENST00000372857 V9GYV3 84 aa13.16□□□□□ -0.3
PABPC4-202ENST00000372857 HBZP02008 142 aa13.15□□□□□ -0.3
PABPC4-202ENST00000372857 EIF4EBP1Q13541 118 aaPredicted RBP13.15□□□□□ -0.3
PABPC4-202ENST00000372857 TMEM249Q2WGJ8 235 aa13.15□□□□□ -0.3
PABPC4-202ENST00000372857 LCN12Q6JVE5 192 aa13.15□□□□□ -0.3
PABPC4-202ENST00000372857 PPP1R32Q7Z5V6 425 aa13.15□□□□□ -0.3
PABPC4-202ENST00000372857 VKORC1L1Q8N0U8 176 aa13.15□□□□□ -0.3
PABPC4-202ENST00000372857 NINJ1Q92982 152 aa13.15□□□□□ -0.3
PABPC4-202ENST00000372857 KCNS1Q96KK3 526 aa13.15□□□□□ -0.3
PABPC4-202ENST00000372857 DMXL1Q9Y485 3027 aa13.15□□□□□ -0.3
PABPC4-202ENST00000372857 SRIP30626 198 aa13.15□□□□□ -0.3
PABPC4-202ENST00000372857 OPRK1P41145 380 aa13.15□□□□□ -0.3
PABPC4-202ENST00000372857 NRN1LQ496H8 165 aa13.15□□□□□ -0.3
PABPC4-202ENST00000372857 MRPL54Q6P161 138 aaKnown RBP13.15□□□□□ -0.3
PABPC4-202ENST00000372857 TMEM45BQ96B21 275 aa13.15□□□□□ -0.3
PABPC4-202ENST00000372857 SFXN3Q9BWM7 321 aa13.15□□□□□ -0.3
PABPC4-202ENST00000372857 NCOR1P1Q9H4R4 102 aa13.15□□□□□ -0.3
PABPC4-202ENST00000372857 CXorf67Q86X51 503 aaPredicted RBP13.15□□□□□ -0.3
PABPC4-202ENST00000372857 ABHD12Q8N2K0 398 aa13.15□□□□□ -0.3
PABPC4-202ENST00000372857 GMPPAQ96IJ6 420 aaPredicted RBP13.15□□□□□ -0.3
PABPC4-202ENST00000372857 ALKBH7Q9BT30 221 aaPredicted RBP13.15□□□□□ -0.3
PABPC4-202ENST00000372857 HEYLQ9NQ87 328 aaPredicted RBP13.15□□□□□ -0.3
PABPC4-202ENST00000372857 TRAV9-1A0A075B6T8 112 aa13.14□□□□□ -0.31
PABPC4-202ENST00000372857 DPRXA6NFQ7 191 aa13.14□□□□□ -0.31
PABPC4-202ENST00000372857 GFRA1P56159 465 aa13.14□□□□□ -0.31
PABPC4-202ENST00000372857 C1orf185Q5T7R7 199 aa13.14□□□□□ -0.31
PABPC4-202ENST00000372857 ASPHD1Q5U4P2 390 aa13.14□□□□□ -0.31
PABPC4-202ENST00000372857 GNB1LQ9BYB4 327 aa13.14□□□□□ -0.31
PABPC4-202ENST00000372857 PSG11Q9UQ72 335 aa13.14□□□□□ -0.31
PABPC4-202ENST00000372857 SSTR5P35346 364 aa13.14□□□□□ -0.31
PABPC4-202ENST00000372857 ZBTB34Q8NCN2 500 aa13.14□□□□□ -0.31
PABPC4-202ENST00000372857 RTL8AQ9BWD3 113 aa13.14□□□□□ -0.31
PABPC4-202ENST00000372857 TET2Q6N021 2002 aaPredicted RBP13.13□□□□□ -0.31
PABPC4-202ENST00000372857 WNT9BO14905 357 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 ZNF324O75467 553 aaPredicted RBP13.13□□□□□ -0.31
PABPC4-202ENST00000372857 HAND1O96004 215 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 CGAP01215 116 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 ALKBH6Q3KRA9 238 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 LYG1Q8N1E2 194 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 CT55Q8WUE5 264 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 ORAOV1Q8WV07 137 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 TXNDC17Q9BRA2 123 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 LOXL2Q9Y4K0 774 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 ACTL6BO94805 426 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 GABRA2P47869 451 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 CENPWQ5EE01 88 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 PQLC2Q6ZP29 291 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 TMEM136Q6ZRR5 245 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 ERASQ7Z444 233 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 NIT1Q86X76 327 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 OR4P4Q8NGL7 312 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 TMEM30CPA0ZSE6 113 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 ARR3P36575 388 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 ERVK11-1P61568 191 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 DCAF12Q5T6F0 453 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 TAAR6Q96RI8 345 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 LINC00470Q9BZP3 86 aa13.13□□□□□ -0.31
PABPC4-202ENST00000372857 NTN3O00634 580 aaPredicted RBP13.12□□□□□ -0.31
PABPC4-202ENST00000372857 FCGR3BO75015 233 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 CLDN18P56856 261 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 EFNB3Q15768 340 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 PRAMEF5Q5TYX0 476 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 PRAMEF6Q5VXH4 476 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 C12orf49Q9H741 205 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 CHODLQ9H9P2 273 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 CHTOPQ9Y3Y2 248 aaKnown RBP13.12□□□□□ -0.31
PABPC4-202ENST00000372857 BMPR1BO00238 502 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 SMPD2O60906 423 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 CRYBB3P26998 211 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 TSPOP30536 169 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 GNG4P50150 75 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 UBE2V1Q13404 147 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 Q5PR19 223 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 ZNF826PQ6ZT77 177 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 ARRDC1-AS1Q9H2J1 176 aa13.12□□□□□ -0.31
PABPC4-202ENST00000372857 MGAQ8IWI9 3026 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms