RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 SLC25A17O43808 307 aa21.16■□□□□ 0.98
ATPAF1-202ENST00000371937 DFFBO76075 338 aa21.16■□□□□ 0.98
ATPAF1-202ENST00000371937 SCAF4O95104 1147 aaKnown RBP21.16■□□□□ 0.98
ATPAF1-202ENST00000371937 VDAC2P45880 294 aaPredicted RBP21.16■□□□□ 0.98
ATPAF1-202ENST00000371937 CLLU1Q5K131 121 aa21.16■□□□□ 0.98
ATPAF1-202ENST00000371937 CFHR4Q92496 578 aa21.16■□□□□ 0.98
ATPAF1-202ENST00000371937 MALSU1Q96EH3 234 aa21.16■□□□□ 0.98
ATPAF1-202ENST00000371937 C1orf159Q96HA4 380 aa21.16■□□□□ 0.98
ATPAF1-202ENST00000371937 ABCA2Q9BZC7 2435 aa21.16■□□□□ 0.98
ATPAF1-202ENST00000371937 VENTXO95231 258 aa21.15■□□□□ 0.98
ATPAF1-202ENST00000371937 OR4C12Q96R67 309 aa21.15■□□□□ 0.98
ATPAF1-202ENST00000371937 ATP5SQ99766 215 aa21.15■□□□□ 0.98
ATPAF1-202ENST00000371937 ARV1Q9H2C2 271 aa21.15■□□□□ 0.98
ATPAF1-202ENST00000371937 NAV2Q8IVL1 2488 aa21.15■□□□□ 0.98
ATPAF1-202ENST00000371937 TEX50A0A1B0GTY4 177 aa21.15■□□□□ 0.98
ATPAF1-202ENST00000371937 PRCDQ00LT1 54 aa21.15■□□□□ 0.98
ATPAF1-202ENST00000371937 A0A096LNT2 108 aa21.14■□□□□ 0.97
ATPAF1-202ENST00000371937 GATA3P23771 443 aa21.14■□□□□ 0.97
ATPAF1-202ENST00000371937 PSG5Q15238 335 aa21.14■□□□□ 0.97
ATPAF1-202ENST00000371937 SLC25A32Q9H2D1 315 aa21.14■□□□□ 0.97
ATPAF1-202ENST00000371937 PLEKHA3Q9HB20 300 aa21.14■□□□□ 0.97
ATPAF1-202ENST00000371937 AUP1Q9Y679 476 aa21.14■□□□□ 0.97
ATPAF1-202ENST00000371937 TRAV20A0A0B4J274 112 aa21.13■□□□□ 0.97
ATPAF1-202ENST00000371937 CENPVL3A0A0U1RRI6 287 aa21.13■□□□□ 0.97
ATPAF1-202ENST00000371937 Q5PR19 223 aa21.13■□□□□ 0.97
ATPAF1-202ENST00000371937 HIST2H2BCQ6DN03 193 aa21.13■□□□□ 0.97
ATPAF1-202ENST00000371937 OR1L8Q8NGR8 309 aa21.13■□□□□ 0.97
ATPAF1-202ENST00000371937 TMED6Q8WW62 240 aa21.13■□□□□ 0.97
ATPAF1-202ENST00000371937 GINS3Q9BRX5 216 aa21.13■□□□□ 0.97
ATPAF1-202ENST00000371937 HINT2Q9BX68 163 aa21.13■□□□□ 0.97
ATPAF1-202ENST00000371937 ZNF430Q9H8G1 570 aaPredicted RBP21.13■□□□□ 0.97
ATPAF1-202ENST00000371937 RPS10-NUDT3A0A1W2PQS6 291 aa21.13■□□□□ 0.97
ATPAF1-202ENST00000371937 NPFFO15130 113 aa21.13■□□□□ 0.97
ATPAF1-202ENST00000371937 IFNA10P01566 189 aa21.13■□□□□ 0.97
ATPAF1-202ENST00000371937 LOXL1Q08397 574 aaPredicted RBP21.13■□□□□ 0.97
ATPAF1-202ENST00000371937 PRSS57Q6UWY2 283 aa21.13■□□□□ 0.97
ATPAF1-202ENST00000371937 TET2Q6N021 2002 aaPredicted RBP21.12■□□□□ 0.97
ATPAF1-202ENST00000371937 MOSP00540 346 aa21.12■□□□□ 0.97
ATPAF1-202ENST00000371937 MYOD1P15172 320 aa21.12■□□□□ 0.97
ATPAF1-202ENST00000371937 SAA4P35542 130 aa21.12■□□□□ 0.97
ATPAF1-202ENST00000371937 OR8G2PQ6IF36 304 aa21.12■□□□□ 0.97
ATPAF1-202ENST00000371937 HAPLN4Q86UW8 402 aa21.12■□□□□ 0.97
ATPAF1-202ENST00000371937 MMD2Q8IY49 270 aa21.12■□□□□ 0.97
ATPAF1-202ENST00000371937 LILRB2Q8N423 598 aa21.12■□□□□ 0.97
ATPAF1-202ENST00000371937 LINC01356Q8N9X3 169 aa21.12■□□□□ 0.97
ATPAF1-202ENST00000371937 OR10P1Q8NGE3 313 aa21.12■□□□□ 0.97
ATPAF1-202ENST00000371937 PINX1Q96BK5 328 aaKnown RBP21.12■□□□□ 0.97
ATPAF1-202ENST00000371937 APCP25054 2843 aa21.12■□□□□ 0.97
ATPAF1-202ENST00000371937 CRYGBP07316 175 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 ARL16Q0P5N6 197 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 NDUFA4L2Q9NRX3 87 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 SIGLEC9Q9Y336 463 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 VPS13CQ709C8 3753 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 C15orf62A8K5M9 175 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 IFNA5P01569 189 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 IGKV1D-33P01593 117 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 IGKV1-33P01594 117 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 OPN1MWP04001 364 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 OPN1MW2P0DN77 364 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 OPN1MW3P0DN78 364 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 F2RL1P55085 397 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 SLC38A11Q08AI6 406 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 ATP6V1FQ16864 119 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 FAM74A1Q5RGS3 127 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 DYNAPQ8N1N2 210 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 OR2T10Q8NGZ9 312 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 LRRC20Q8TCA0 184 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 C7orf69Q9H7B7 122 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 HIF1ANQ9NWT6 349 aa21.11■□□□□ 0.97
ATPAF1-202ENST00000371937 MAP1AP78559 2803 aaPredicted RBP21.1■□□□□ 0.97
ATPAF1-202ENST00000371937 CNTFRP26992 372 aa21.1■□□□□ 0.97
ATPAF1-202ENST00000371937 PRSS8Q16651 343 aa21.1■□□□□ 0.97
ATPAF1-202ENST00000371937 SLC7A5P1Q8MH63 180 aa21.1■□□□□ 0.97
ATPAF1-202ENST00000371937 C17orf50Q8WW18 174 aa21.1■□□□□ 0.97
ATPAF1-202ENST00000371937 METTL1Q9UBP6 276 aaKnown RBP21.1■□□□□ 0.97
ATPAF1-202ENST00000371937 TNCP24821 2201 aa21.1■□□□□ 0.97
ATPAF1-202ENST00000371937 PMS2P5A8MQ11 134 aa21.09■□□□□ 0.97
ATPAF1-202ENST00000371937 FBXO24O75426 580 aa21.09■□□□□ 0.97
ATPAF1-202ENST00000371937 NMBP08949 121 aa21.09■□□□□ 0.97
ATPAF1-202ENST00000371937 OR8U8P0C7N1 319 aa21.09■□□□□ 0.97
ATPAF1-202ENST00000371937 SEC11BP0C7V7 166 aa21.09■□□□□ 0.97
ATPAF1-202ENST00000371937 MAS1LP35410 378 aa21.09■□□□□ 0.97
ATPAF1-202ENST00000371937 RAB11AP62491 216 aa21.09■□□□□ 0.97
ATPAF1-202ENST00000371937 PPP1R27Q86WC6 154 aa21.09■□□□□ 0.97
ATPAF1-202ENST00000371937 HSD17B11Q8NBQ5 300 aa21.09■□□□□ 0.97
ATPAF1-202ENST00000371937 RNF141Q8WVD5 230 aa21.09■□□□□ 0.97
ATPAF1-202ENST00000371937 REG4Q9BYZ8 158 aa21.09■□□□□ 0.97
ATPAF1-202ENST00000371937 TPSG1Q9NRR2 321 aa21.09■□□□□ 0.97
ATPAF1-202ENST00000371937 IGHV1-69DA0A0B4J2H0 117 aa21.08■□□□□ 0.97
ATPAF1-202ENST00000371937 ACTL6BO94805 426 aa21.08■□□□□ 0.97
ATPAF1-202ENST00000371937 IGHV1-69P01742 117 aa21.08■□□□□ 0.97
ATPAF1-202ENST00000371937 ATP5IP56385 69 aaPredicted RBP21.08■□□□□ 0.97
ATPAF1-202ENST00000371937 HES1Q14469 280 aa21.08■□□□□ 0.97
ATPAF1-202ENST00000371937 THNSL2Q86YJ6 484 aa21.08■□□□□ 0.97
ATPAF1-202ENST00000371937 SLC24A4Q8NFF2 622 aa21.08■□□□□ 0.97
ATPAF1-202ENST00000371937 PCNPQ8WW12 178 aaKnown RBP21.08■□□□□ 0.97
ATPAF1-202ENST00000371937 AJUBAQ96IF1 538 aa21.08■□□□□ 0.97
ATPAF1-202ENST00000371937 EAF1Q96JC9 268 aaPredicted RBP21.08■□□□□ 0.97
ATPAF1-202ENST00000371937 A0A1W2PN81 502 aa21.08■□□□□ 0.96
ATPAF1-202ENST00000371937 SNRNP70P08621 437 aaKnown RBP21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms