RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 MOB3BQ86TA1 216 aa11.33□□□□□ -0.6
SHC1-202ENST00000368445 ZCCHC14Q8WYQ9 949 aaKnown RBP11.33□□□□□ -0.6
SHC1-202ENST00000368445 AURKAIP1Q9NWT8 199 aaPredicted RBP11.33□□□□□ -0.6
SHC1-202ENST00000368445 CA2P00918 260 aa11.33□□□□□ -0.6
SHC1-202ENST00000368445 CT45A6P0DMU7 189 aa11.33□□□□□ -0.6
SHC1-202ENST00000368445 CT45A5P0DMU8 189 aa11.33□□□□□ -0.6
SHC1-202ENST00000368445 CT45A7P0DMV0 189 aa11.33□□□□□ -0.6
SHC1-202ENST00000368445 GNB1P62873 340 aa11.33□□□□□ -0.6
SHC1-202ENST00000368445 RAB31Q13636 194 aa11.33□□□□□ -0.6
SHC1-202ENST00000368445 C10orf91Q5T1B1 145 aa11.33□□□□□ -0.6
SHC1-202ENST00000368445 TGIF2LXQ8IUE1 241 aa11.33□□□□□ -0.6
SHC1-202ENST00000368445 TVP23CQ96ET8 276 aa11.33□□□□□ -0.6
SHC1-202ENST00000368445 ACY3Q96HD9 319 aa11.33□□□□□ -0.6
SHC1-202ENST00000368445 ONECUT1Q9UBC0 465 aa11.33□□□□□ -0.6
SHC1-202ENST00000368445 PRELID1Q9Y255 219 aa11.33□□□□□ -0.6
SHC1-202ENST00000368445 A0A1B0GWJ7 208 aa11.32□□□□□ -0.6
SHC1-202ENST00000368445 KHDC3LQ587J8 217 aa11.32□□□□□ -0.6
SHC1-202ENST00000368445 MBP02144 154 aa11.32□□□□□ -0.6
SHC1-202ENST00000368445 WNT2P09544 360 aa11.32□□□□□ -0.6
SHC1-202ENST00000368445 RHEBQ15382 184 aa11.32□□□□□ -0.6
SHC1-202ENST00000368445 NECAP1Q8NC96 275 aa11.32□□□□□ -0.6
SHC1-202ENST00000368445 OR10W1Q8NGF6 305 aa11.32□□□□□ -0.6
SHC1-202ENST00000368445 PLGLAQ15195 96 aa11.32□□□□□ -0.6
SHC1-202ENST00000368445 CDSNQ15517 529 aa11.32□□□□□ -0.6
SHC1-202ENST00000368445 CTSZQ9UBR2 303 aa11.32□□□□□ -0.6
SHC1-202ENST00000368445 SRRM4A7MD48 611 aaKnown RBP11.31□□□□□ -0.6
SHC1-202ENST00000368445 FAM157AC9JC47 383 aa11.31□□□□□ -0.6
SHC1-202ENST00000368445 HSPB1P04792 205 aaKnown RBP11.31□□□□□ -0.6
SHC1-202ENST00000368445 CGB3P0DN86 165 aa11.31□□□□□ -0.6
SHC1-202ENST00000368445 CGB7P0DN87 165 aa11.31□□□□□ -0.6
SHC1-202ENST00000368445 TEX36Q5VZQ5 186 aa11.31□□□□□ -0.6
SHC1-202ENST00000368445 ZNF343Q6P1L6 599 aa11.31□□□□□ -0.6
SHC1-202ENST00000368445 DPPA3Q6W0C5 159 aa11.31□□□□□ -0.6
SHC1-202ENST00000368445 TOLLIPQ9H0E2 274 aa11.31□□□□□ -0.6
SHC1-202ENST00000368445 VAX2Q9UIW0 290 aa11.31□□□□□ -0.6
SHC1-202ENST00000368445 CTXND1A0A1B0GTU2 59 aa11.31□□□□□ -0.6
SHC1-202ENST00000368445 RBFOX2O43251 390 aaKnown RBP eCLIP11.31□□□□□ -0.6
SHC1-202ENST00000368445 SLC25A17O43808 307 aa11.31□□□□□ -0.6
SHC1-202ENST00000368445 SAA1P0DJI8 122 aaPredicted RBP11.31□□□□□ -0.6
SHC1-202ENST00000368445 MLANAQ16655 118 aa11.31□□□□□ -0.6
SHC1-202ENST00000368445 ZNF506Q5JVG8 444 aa11.31□□□□□ -0.6
SHC1-202ENST00000368445 HEPN1Q6WQI6 88 aa11.31□□□□□ -0.6
SHC1-202ENST00000368445 SLC25A48Q6ZT89 311 aaKnown RBP11.31□□□□□ -0.6
SHC1-202ENST00000368445 LOC102723971A0A1B0GUV8 181 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 C15orf61A6NNL5 157 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 SNRPCP09234 159 aaKnown RBP11.3□□□□□ -0.6
SHC1-202ENST00000368445 P0C879 139 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 HNF1AP20823 631 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 C10orf55Q5SWW7 151 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 JKAMPQ9P055 326 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 PXMP4Q9Y6I8 212 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 KBTBD11O94819 623 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 REG1AP05451 166 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 GATA2P23769 480 aaPredicted RBP11.3□□□□□ -0.6
SHC1-202ENST00000368445 B2MP61769 119 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 OR10A7Q8NGE5 316 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 SCRT1Q9BWW7 348 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 PRNDQ9UKY0 176 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 PAX6P26367 422 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 ZNF251Q9BRH9 671 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 SIRT7Q9NRC8 400 aa11.3□□□□□ -0.6
SHC1-202ENST00000368445 IGHV3-21A0A0B4J1V1 117 aa11.29□□□□□ -0.6
SHC1-202ENST00000368445 FLI1Q01543 452 aaPredicted RBP11.29□□□□□ -0.6
SHC1-202ENST00000368445 MEF2CQ06413 473 aaPredicted RBP11.29□□□□□ -0.6
SHC1-202ENST00000368445 SSX8Q7RTT4 187 aa11.29□□□□□ -0.6
SHC1-202ENST00000368445 SLC35E3Q7Z769 313 aa11.29□□□□□ -0.6
SHC1-202ENST00000368445 NPVFQ9HCQ7 196 aa11.29□□□□□ -0.6
SHC1-202ENST00000368445 A0A0U1RQK1 487 aa11.29□□□□□ -0.6
SHC1-202ENST00000368445 ARF6P62330 175 aa11.29□□□□□ -0.6
SHC1-202ENST00000368445 MEF2BQ02080 365 aaPredicted RBP11.29□□□□□ -0.6
SHC1-202ENST00000368445 CR1LQ2VPA4 569 aa11.29□□□□□ -0.6
SHC1-202ENST00000368445 DMRTC2Q8IXT2 367 aaPredicted RBP11.29□□□□□ -0.6
SHC1-202ENST00000368445 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.29□□□□□ -0.6
SHC1-202ENST00000368445 HIST1H2BAQ96A08 127 aa11.29□□□□□ -0.6
SHC1-202ENST00000368445 GNB2P62879 340 aa11.29□□□□□ -0.6
SHC1-202ENST00000368445 ERHP84090 104 aaKnown RBP11.29□□□□□ -0.6
SHC1-202ENST00000368445 PAX5Q02548 391 aa11.29□□□□□ -0.6
SHC1-202ENST00000368445 TEPPQ6URK8 271 aa11.29□□□□□ -0.6
SHC1-202ENST00000368445 TREML4Q6UXN2 200 aa11.29□□□□□ -0.6
SHC1-202ENST00000368445 COLCA2A8K830 154 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 MT-ND4LP03901 98 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 SNRPEP62304 92 aaKnown RBP11.28□□□□□ -0.6
SHC1-202ENST00000368445 RAB1BQ9H0U4 201 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 INSIG2Q9Y5U4 225 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 RAB13P51153 203 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 RPL8P62917 257 aaKnown RBP11.28□□□□□ -0.6
SHC1-202ENST00000368445 C15orf54Q8N8G6 183 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 FAM216AQ8WUB2 273 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 TIMD4Q96H15 378 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 SMDT1Q9H4I9 107 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 DOK5Q9P104 306 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 PPIAL4CA0A0B4J2A2 164 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 C11orf94C9JXX5 98 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 PPIAL4GP0DN37 164 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 LOXP28300 417 aaPredicted RBP11.28□□□□□ -0.6
SHC1-202ENST00000368445 ZNF672Q499Z4 452 aaPredicted RBP11.28□□□□□ -0.6
SHC1-202ENST00000368445 HCP5Q6MZN7 132 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 OR9G1Q8NH87 305 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 MBD3L1Q8WWY6 194 aa11.28□□□□□ -0.6
SHC1-202ENST00000368445 WDR83OSQ9Y284 106 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms