RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 SLC25A22Q9H936 323 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 PPP1R3CQ9UQK1 317 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 WDR83OSQ9Y284 106 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 RBM7Q9Y580 266 aaKnown RBP9.57□□□□□ -0.88
USF1-201ENST00000368019 ARL2-SNX15V9GYD0 113 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 CSPG4Q6UVK1 2322 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 DNHD1Q96M86 4753 aa9.57□□□□□ -0.88
USF1-201ENST00000368019 OOEPA6NGQ2 149 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 M0R143 59 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 HSPB6O14558 160 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 TCAPO15273 167 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 CD55P08174 381 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 RAC2P15153 192 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 SELEP16581 610 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 IL3RAP26951 378 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 P2RY6Q15077 328 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 COX19Q49B96 90 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 PDLIM3Q53GG5 364 aaPredicted RBP9.56□□□□□ -0.88
USF1-201ENST00000368019 TRAT1Q6PIZ9 186 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 LINC01551Q86U37 167 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 OR52E5Q8NH55 327 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 DTD1Q8TEA8 209 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 SFXN3Q9BWM7 321 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 HES4Q9HCC6 221 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 BEX4Q9NWD9 120 aaPredicted RBP9.56□□□□□ -0.88
USF1-201ENST00000368019 CLCF1Q9UBD9 225 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 FUT9Q9Y231 359 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 PRR14LQ5THK1 2151 aa9.56□□□□□ -0.88
USF1-201ENST00000368019 CHD3Q12873 2000 aaKnown RBP9.55□□□□□ -0.88
USF1-201ENST00000368019 TRBV9A0A0B4J1U6 114 aa9.55□□□□□ -0.88
USF1-201ENST00000368019 ODAMA1E959 279 aa9.55□□□□□ -0.88
USF1-201ENST00000368019 A8MXE2 369 aa9.55□□□□□ -0.88
USF1-201ENST00000368019 C11orf94C9JXX5 98 aa9.55□□□□□ -0.88
USF1-201ENST00000368019 TUBG1P23258 451 aa9.55□□□□□ -0.88
USF1-201ENST00000368019 IZUMO4Q1ZYL8 232 aa9.55□□□□□ -0.88
USF1-201ENST00000368019 OR8G2PQ6IF36 304 aa9.55□□□□□ -0.88
USF1-201ENST00000368019 MRPL41Q8IXM3 137 aaKnown RBP9.55□□□□□ -0.88
USF1-201ENST00000368019 BATF2Q8N1L9 274 aa9.55□□□□□ -0.88
USF1-201ENST00000368019 OR1K1Q8NGR3 316 aa9.55□□□□□ -0.88
USF1-201ENST00000368019 IL1F10Q8WWZ1 152 aa9.55□□□□□ -0.88
USF1-201ENST00000368019 GALMQ96C23 342 aa9.55□□□□□ -0.88
USF1-201ENST00000368019 HSD17B10Q99714 261 aaKnown RBP9.55□□□□□ -0.88
USF1-201ENST00000368019 C20orf144Q9BQM9 153 aa9.55□□□□□ -0.88
USF1-201ENST00000368019 ELOVL1Q9BW60 279 aa9.55□□□□□ -0.88
USF1-201ENST00000368019 FKBP11Q9NYL4 201 aa9.55□□□□□ -0.88
USF1-201ENST00000368019 RTTNQ86VV8 2226 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 MDFIC2A0A1B0GVS7 189 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 A0A1W2PR80 420 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 PAGE4O60829 102 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 TNFSF13O75888 250 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 NXPH2O95156 264 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 NGFP01138 241 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 ZNF16P17020 682 aaPredicted RBP9.54□□□□□ -0.88
USF1-201ENST00000368019 CCNOP22674 350 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 CD1BP29016 333 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 OPRK1P41145 380 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 WNT5AP41221 380 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 RPL19P84098 196 aaKnown RBP9.54□□□□□ -0.88
USF1-201ENST00000368019 USF2Q15853 346 aaPredicted RBP9.54□□□□□ -0.88
USF1-201ENST00000368019 TUSC5Q8IXB3 177 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 Q8N7P7 452 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 TMEM37Q8WXS4 190 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 BCL2L2Q92843 193 aaPredicted RBP9.54□□□□□ -0.88
USF1-201ENST00000368019 TUBG2Q9NRH3 451 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 ELOVL5Q9NYP7 299 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 NAGKQ9UJ70 344 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 TRAPPC1Q9Y5R8 145 aa9.54□□□□□ -0.88
USF1-201ENST00000368019 ZNF503-AS2A6NEH8 195 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 ZNF705GA8MUZ8 300 aaPredicted RBP9.53□□□□□ -0.88
USF1-201ENST00000368019 IQCF6A8MYZ5 107 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 C9JCJ5 164 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 RBFOX2O43251 390 aaKnown RBP eCLIP9.53□□□□□ -0.88
USF1-201ENST00000368019 SIAH2O43255 324 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 RHBDL1O75783 438 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 KRASP01116 189 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 GNB1P62873 340 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 SRYQ05066 204 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 TBC1D28Q2M2D7 210 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 FAM78BQ5VT40 261 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 Q71RC1 249 aaPredicted RBP9.53□□□□□ -0.88
USF1-201ENST00000368019 H2BFWTQ7Z2G1 175 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 TGIF2LXQ8IUE1 241 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 GCNT2Q8N0V5 402 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 SCCPDHQ8NBX0 429 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 NECAP1Q8NC96 275 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 C11orf52Q96A22 123 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 ZNF488Q96MN9 340 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 HIVEP2P31629 2446 aa9.53□□□□□ -0.88
USF1-201ENST00000368019 A0A096LPE4 126 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 A0A0U1RQK1 487 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 A0A1B0GWJ7 208 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 A0A1W2PPZ6 126 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 ZNF320A2RRD8 509 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 C15orf62A8K5M9 175 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 DEFB108AA8MXU0 73 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 COL6A5A8TX70 2615 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 FNDC10F2Z333 226 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 IFNL4K9M1U5 179 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 SIRPB1O00241 398 aa9.52□□□□□ -0.89
USF1-201ENST00000368019 CDIPTO14735 213 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms