RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 MUC15Q8N387 334 aa12.44□□□□□ -0.42
UBAP1-202ENST00000359544 SLC24A4Q8NFF2 622 aa12.44□□□□□ -0.42
UBAP1-202ENST00000359544 OR2M7Q8NG81 312 aa12.44□□□□□ -0.42
UBAP1-202ENST00000359544 TRAV9-2A0A087WT02 112 aa12.44□□□□□ -0.42
UBAP1-202ENST00000359544 RAMP3O60896 148 aa12.44□□□□□ -0.42
UBAP1-202ENST00000359544 OR10J4P0C629 311 aa12.44□□□□□ -0.42
UBAP1-202ENST00000359544 NTF4P34130 210 aa12.44□□□□□ -0.42
UBAP1-202ENST00000359544 ZNF816Q0VGE8 651 aaPredicted RBP12.44□□□□□ -0.42
UBAP1-202ENST00000359544 SPACA3Q8IXA5 215 aa12.44□□□□□ -0.42
UBAP1-202ENST00000359544 NUDT10Q8NFP7 164 aa12.44□□□□□ -0.42
UBAP1-202ENST00000359544 OR4P4Q8NGL7 312 aa12.44□□□□□ -0.42
UBAP1-202ENST00000359544 MRPL27Q9P0M9 148 aaKnown RBP12.44□□□□□ -0.42
UBAP1-202ENST00000359544 KMT2BQ9UMN6 2715 aaPredicted RBP12.43□□□□□ -0.42
UBAP1-202ENST00000359544 RBMXL2O75526 392 aaKnown RBP12.43□□□□□ -0.42
UBAP1-202ENST00000359544 CLDN14O95500 239 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 AMY1AP04745 511 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 SRIP30626 198 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 CARD18P57730 90 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 RHOGP84095 191 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 PDLIM3Q53GG5 364 aaPredicted RBP12.43□□□□□ -0.42
UBAP1-202ENST00000359544 H2BFWTQ7Z2G1 175 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 TSKUQ8WUA8 353 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 ZNF488Q96MN9 340 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 CRIM1Q9NZV1 1036 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 ADAMTS20P59510 1910 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 ZNF716A6NP11 495 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 FRMD6-AS1P0C7T7 363 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 RAC2P15153 192 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 WT1P19544 449 aaPredicted RBP12.43□□□□□ -0.42
UBAP1-202ENST00000359544 GABRA2P47869 451 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 NRN1LQ496H8 165 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 LRRC10Q5BKY1 277 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 TMEM164Q5U3C3 297 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 ZNF497Q6ZNH5 498 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 SPOCK3Q9BQ16 436 aa12.43□□□□□ -0.42
UBAP1-202ENST00000359544 YTHDF2Q9Y5A9 579 aaKnown RBP12.43□□□□□ -0.42
UBAP1-202ENST00000359544 MED12Q93074 2177 aa12.42□□□□□ -0.42
UBAP1-202ENST00000359544 A0A1W2PRS3 328 aa12.42□□□□□ -0.42
UBAP1-202ENST00000359544 OR5B21A6NL26 309 aa12.42□□□□□ -0.42
UBAP1-202ENST00000359544 C15orf62A8K5M9 175 aa12.42□□□□□ -0.42
UBAP1-202ENST00000359544 CDIPTO14735 213 aa12.42□□□□□ -0.42
UBAP1-202ENST00000359544 CCNOP22674 350 aa12.42□□□□□ -0.42
UBAP1-202ENST00000359544 GCHFRP30047 84 aa12.42□□□□□ -0.42
UBAP1-202ENST00000359544 KIAA1644Q3SXP7 199 aa12.42□□□□□ -0.42
UBAP1-202ENST00000359544 ZNF439Q8NDP4 499 aa12.42□□□□□ -0.42
UBAP1-202ENST00000359544 PKIBQ9C010 78 aa12.42□□□□□ -0.42
UBAP1-202ENST00000359544 OR2D2Q9H210 308 aa12.42□□□□□ -0.42
UBAP1-202ENST00000359544 CST9LQ9H4G1 147 aa12.42□□□□□ -0.42
UBAP1-202ENST00000359544 KCNIP1Q9NZI2 227 aa12.42□□□□□ -0.42
UBAP1-202ENST00000359544 DKK4Q9UBT3 224 aa12.42□□□□□ -0.42
UBAP1-202ENST00000359544 TNRC6AQ8NDV7 1962 aaKnown RBP12.41□□□□□ -0.42
UBAP1-202ENST00000359544 NTF3P20783 257 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 GNG3P63215 75 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 OCIAD2Q56VL3 154 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 Q6P435 159 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 ATOH7Q8N100 152 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 OR4F17Q8NGA8 305 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 TAAR6Q96RI8 345 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 ZPBPQ9BS86 351 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 RARRES3Q9UL19 164 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 CHD6Q8TD26 2715 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 M0QZ24 198 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 BMPR1BO00238 502 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 CCL3P10147 92 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 AREGP15514 252 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 SELENOVP59797 346 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 CLEC7AQ9BXN2 247 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 OSTCQ9NRP0 149 aa12.41□□□□□ -0.42
UBAP1-202ENST00000359544 MBNL3Q9NUK0 354 aaKnown RBP12.41□□□□□ -0.42
UBAP1-202ENST00000359544 PTPRQQ9UMZ3 2332 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 ANKRD30BLA7E2S9 258 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 RRHO14718 337 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 SCRG1O75711 98 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 GNG4P50150 75 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 MPC1Q9Y5U8 109 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 TMEM8BA6NDV4 472 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 NEURL1O76050 574 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 TOX4O94842 621 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 APCSP02743 223 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 LINC00869P0C866 280 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 RPL30P62888 115 aaKnown RBP12.4□□□□□ -0.42
UBAP1-202ENST00000359544 LDLRAD2Q5SZI1 272 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 SPATA46Q5T0L3 261 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 IGF2-ASQ6U949 168 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 FAM19A2Q8N3H0 131 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 WDR31Q8NA23 367 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 SCCPDHQ8NBX0 429 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 UBALD1Q8TB05 177 aa12.4□□□□□ -0.42
UBAP1-202ENST00000359544 H0YJW9 148 aa12.39□□□□□ -0.43
UBAP1-202ENST00000359544 ARG2P78540 354 aa12.39□□□□□ -0.43
UBAP1-202ENST00000359544 MAJINQ3KP22 176 aa12.39□□□□□ -0.43
UBAP1-202ENST00000359544 SPINK9Q5DT21 86 aa12.39□□□□□ -0.43
UBAP1-202ENST00000359544 GGTLC1Q9BX51 225 aa12.39□□□□□ -0.43
UBAP1-202ENST00000359544 SPRY4Q9C004 299 aa12.39□□□□□ -0.43
UBAP1-202ENST00000359544 ARL2-SNX15V9GYD0 113 aa12.39□□□□□ -0.43
UBAP1-202ENST00000359544 PIEZO2Q9H5I5 2752 aa12.39□□□□□ -0.43
UBAP1-202ENST00000359544 C5orf49A4QMS7 147 aa12.39□□□□□ -0.43
UBAP1-202ENST00000359544 ZNF891A8MT65 544 aaPredicted RBP12.39□□□□□ -0.43
UBAP1-202ENST00000359544 SPINK4O60575 86 aa12.39□□□□□ -0.43
UBAP1-202ENST00000359544 CLDN18P56856 261 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms