RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 FAM87AP0C7U9 286 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 TRGC1P0CF51 173 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 ELOBQ15370 118 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 PRR27Q6MZM9 219 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 Q6ZS92 163 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 TRAPPC1Q9Y5R8 145 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 CXorf65A6NEN9 183 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 C1QTNF9BB2RNN3 333 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 TSTD3H0UI37 97 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 MYOD1P15172 320 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 DEFA6Q01524 100 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 BAGE3Q86Y29 109 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 BAGE2Q86Y30 109 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 DKK4Q9UBT3 224 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 SLC45A2Q9UMX9 530 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 PDE6DO43924 150 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 HEPN1Q6WQI6 88 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 SNRNP40Q96DI7 357 aaKnown RBP9.27□□□□□ -0.93
SSU72-202ENST00000359060 HES4Q9HCC6 221 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 ZNRD1Q9P1U0 126 aa9.27□□□□□ -0.93
SSU72-202ENST00000359060 METTL1Q9UBP6 276 aaKnown RBP9.27□□□□□ -0.93
SSU72-202ENST00000359060 A0A1B0GW64 132 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 TMEM250H0YL14 139 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 GATA2P23769 480 aaPredicted RBP9.26□□□□□ -0.93
SSU72-202ENST00000359060 CT45A1Q5HYN5 189 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 OR1L8Q8NGR8 309 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 CT45A3Q8NHU0 189 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 SGMS2Q8NHU3 365 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 CA5BP1Q8WTZ4 195 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 FAM122AQ96E09 287 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 TRAV1-1A0A0B4J248 108 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 ZNF726P1Q15940 193 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 SPRNQ5BIV9 151 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 CYP2G1PQ6ZSU1 146 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 STPG3Q8N7X2 389 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 TIMM8BQ9Y5J9 83 aaPredicted RBP9.26□□□□□ -0.93
SSU72-202ENST00000359060 FAM215AQ9Y5M1 114 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 IGLV1-44P01699 117 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 ORM2P19652 201 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 TIMP3P35625 211 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 TNXAQ16473 311 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 C9orf152Q5JTZ5 239 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 OR10G8Q8NGN5 311 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 PRO1933Q9H354 126 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 ONECUT1Q9UBC0 465 aa9.26□□□□□ -0.93
SSU72-202ENST00000359060 PGPEP1LA6NFU8 196 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 C17orf100A8MU93 164 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 SLC25A17O43808 307 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 CLN5O75503 358 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 IGFBP2P18065 325 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 TCL1AP56279 114 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 SUMO1P63165 101 aaKnown RBP9.25□□□□□ -0.93
SSU72-202ENST00000359060 UBE2L3P68036 154 aaKnown RBP9.25□□□□□ -0.93
SSU72-202ENST00000359060 SSX7Q7RTT5 188 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 ANAPC16Q96DE5 110 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 BTF3L4Q96K17 158 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 TNRC6AQ8NDV7 1962 aaKnown RBP9.25□□□□□ -0.93
SSU72-202ENST00000359060 A0A087WWC5 75 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 IGKV1D-33P01593 117 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 IGKV1-33P01594 117 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 IGLV2-14P01704 120 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 RPL8P62917 257 aaKnown RBP9.25□□□□□ -0.93
SSU72-202ENST00000359060 FAM90A2PQ658T7 463 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 SPNS3Q6ZMD2 512 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 RPEQ96AT9 228 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 WDR83OSQ9Y284 106 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.25□□□□□ -0.93
SSU72-202ENST00000359060 C15orf62A8K5M9 175 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 TOX4O94842 621 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 PLAUP00749 431 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 REG1AP05451 166 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 IL6RP08887 468 aaPredicted RBP9.25□□□□□ -0.93
SSU72-202ENST00000359060 AGAP20933 346 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 GNG4P50150 75 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 RPL23P62829 140 aaKnown RBP9.25□□□□□ -0.93
SSU72-202ENST00000359060 HCP5Q6MZN7 132 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 VSTM2AQ8TAG5 236 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 LINC01560Q8TB33 94 aa9.25□□□□□ -0.93
SSU72-202ENST00000359060 TECRQ9NZ01 308 aaKnown RBP9.25□□□□□ -0.93
SSU72-202ENST00000359060 C5orf52A6NGY3 159 aa9.24□□□□□ -0.93
SSU72-202ENST00000359060 DOLPP1Q86YN1 238 aa9.24□□□□□ -0.93
SSU72-202ENST00000359060 BLNKQ8WV28 456 aa9.24□□□□□ -0.93
SSU72-202ENST00000359060 SCNM1Q9BWG6 230 aa9.24□□□□□ -0.93
SSU72-202ENST00000359060 MRPL20Q9BYC9 149 aaKnown RBP9.24□□□□□ -0.93
SSU72-202ENST00000359060 PPIHO43447 177 aaKnown RBP9.24□□□□□ -0.93
SSU72-202ENST00000359060 FOLR2P14207 255 aa9.24□□□□□ -0.93
SSU72-202ENST00000359060 PLA2G5P39877 138 aa9.24□□□□□ -0.93
SSU72-202ENST00000359060 GNB2P62879 340 aa9.24□□□□□ -0.93
SSU72-202ENST00000359060 PMS2P11Q13670 270 aa9.24□□□□□ -0.93
SSU72-202ENST00000359060 PACRGQ96M98 296 aaPredicted RBP9.24□□□□□ -0.93
SSU72-202ENST00000359060 ZNF134P52741 427 aa9.24□□□□□ -0.93
SSU72-202ENST00000359060 TREML4Q6UXN2 200 aa9.24□□□□□ -0.93
SSU72-202ENST00000359060 ELOVL1Q9BW60 279 aa9.24□□□□□ -0.93
SSU72-202ENST00000359060 IFI27L2Q9H2X8 130 aa9.24□□□□□ -0.93
SSU72-202ENST00000359060 INSIG2Q9Y5U4 225 aa9.24□□□□□ -0.93
SSU72-202ENST00000359060 CCL21O00585 134 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 CDX1P47902 265 aaPredicted RBP9.23□□□□□ -0.93
SSU72-202ENST00000359060 BPIFB3P59826 476 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 TMEM18Q96B42 140 aa9.23□□□□□ -0.93
SSU72-202ENST00000359060 TIMD4Q96H15 378 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms