RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 PEAR1Q5VY43 1037 aaPredicted RBP8.71□□□□□ -1.02
SPTAN1-201ENST00000358161 OR8A1Q8NGG7 326 aa8.71□□□□□ -1.02
SPTAN1-201ENST00000358161 TUBA4BQ9H853 241 aa8.71□□□□□ -1.02
SPTAN1-201ENST00000358161 PTPRDP23468 1912 aa8.71□□□□□ -1.02
SPTAN1-201ENST00000358161 A0A1B0GTI1 187 aa8.71□□□□□ -1.02
SPTAN1-201ENST00000358161 C19orf54Q5BKX5 351 aa8.71□□□□□ -1.02
SPTAN1-201ENST00000358161 FBXL7Q9UJT9 491 aa8.71□□□□□ -1.02
SPTAN1-201ENST00000358161 INTS1Q8N201 2190 aaKnown RBP8.71□□□□□ -1.02
SPTAN1-201ENST00000358161 M0R143 59 aa8.71□□□□□ -1.02
SPTAN1-201ENST00000358161 CA2P00918 260 aa8.71□□□□□ -1.02
SPTAN1-201ENST00000358161 CCL1P22362 96 aa8.71□□□□□ -1.02
SPTAN1-201ENST00000358161 FAM131CQ96AQ9 280 aa8.71□□□□□ -1.02
SPTAN1-201ENST00000358161 FANCMQ8IYD8 2048 aa8.71□□□□□ -1.02
SPTAN1-201ENST00000358161 YPEL1O60688 119 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 SNRPCP09234 159 aaKnown RBP8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 IGFBP3P17936 291 aaPredicted RBP8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 CKS2P33552 79 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 YPEL2Q96QA6 119 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 DCAF16Q9NXF7 216 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 C20orf204Q6ZNR8 217 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 CLDND2Q8NHS1 167 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 PSMG3Q9BT73 122 aaPredicted RBP8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 NEUROG3Q9Y4Z2 214 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 IFITM3Q01628 133 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 MBNL2Q5VZF2 373 aaKnown RBP8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 WDR82Q6UXN9 313 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 RNASEH2CQ8TDP1 164 aaKnown RBP8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 TP53BP1Q12888 1972 aaPredicted RBP8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 LOC389332A0A1B0GUA5 103 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 FAM209BQ5JX69 171 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 ZNF841Q6ZN19 808 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 GTF2H5Q6ZYL4 71 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 LINC00305Q7Z4B0 112 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 TRAF4Q9BUZ4 470 aaPredicted RBP8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 PEMTQ9UBM1 199 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 TRGC1P0CF51 173 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 TMEM177Q53S58 311 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 LAIR2Q6ISS4 152 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 GGNQ86UU5 652 aa8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 MRPL20Q9BYC9 149 aaKnown RBP8.7□□□□□ -1.02
SPTAN1-201ENST00000358161 GCGP01275 180 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 VDAC2P45880 294 aaPredicted RBP8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 SAPCD1Q5SSQ6 148 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 DHRS11Q6UWP2 260 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 IFI27L2Q9H2X8 130 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 CEP250Q9BV73 2442 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 PSMB2P49721 201 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 TMEM133Q9H2Q1 129 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 C21orf62Q9NYP8 219 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 TSC2P49815 1807 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 FAM159AQ6UWV7 190 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 COLCA1Q6ZS62 124 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 NBR2O15453 112 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 WDR25Q64LD2 544 aaPredicted RBP8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 ST6GALNAC3Q8NDV1 305 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 PRSS22Q9GZN4 317 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 MSRB2Q9Y3D2 182 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 CRXO43186 299 aaPredicted RBP8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 UCP1P25874 307 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 METRNQ9UJH8 293 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 PTBP3O95758 552 aaKnown RBP8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 HLA-DQA1P01909 254 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 ZNF497Q6ZNH5 498 aa8.69□□□□□ -1.02
SPTAN1-201ENST00000358161 SRSF9Q13242 221 aaKnown RBP eCLIP8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 CACNG8Q8WXS5 425 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 GTF3AQ92664 365 aaKnown RBP8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 BET1LQ9NYM9 111 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 ZFP30Q9Y2G7 519 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 GBF1Q92538 1859 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 LYPD3O95274 346 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 CACNA1DQ01668 2161 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 KLK2P20151 261 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 BTF3P20290 206 aaKnown RBP8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 HIST1H1AQ02539 215 aaPredicted RBP8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 MIEN1Q9BRT3 115 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 RTN4RQ9BZR6 473 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 IGKV3-15P01624 115 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 FOXF2Q12947 444 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 CBLN2Q8IUK8 224 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 PACRGQ96M98 296 aaPredicted RBP8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 ACACAQ13085 2346 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 EP300Q09472 2414 aaPredicted RBP8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 MDS2Q8NDY4 140 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 MAP1LC3AQ9H492 121 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 ANAPC1Q9H1A4 1944 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 C17orf98A8MV24 154 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 ZNF660Q6AZW8 331 aaPredicted RBP8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 TNFRSF14Q92956 283 aa8.68□□□□□ -1.02
SPTAN1-201ENST00000358161 M0R3E3 92 aa8.67□□□□□ -1.02
SPTAN1-201ENST00000358161 DANCRP0C864 163 aa8.67□□□□□ -1.02
SPTAN1-201ENST00000358161 RNF224P0DH78 156 aa8.67□□□□□ -1.02
SPTAN1-201ENST00000358161 H2BFSP57053 126 aa8.67□□□□□ -1.02
SPTAN1-201ENST00000358161 HIST1H2BAQ96A08 127 aa8.67□□□□□ -1.02
SPTAN1-201ENST00000358161 FOXA2Q9Y261 457 aaPredicted RBP8.67□□□□□ -1.02
SPTAN1-201ENST00000358161 AMY1AP04745 511 aa8.67□□□□□ -1.02
SPTAN1-201ENST00000358161 MYOD1P15172 320 aa8.67□□□□□ -1.02
SPTAN1-201ENST00000358161 CD8AP01732 235 aa8.67□□□□□ -1.02
SPTAN1-201ENST00000358161 RPL29P47914 159 aaKnown RBP8.67□□□□□ -1.02
SPTAN1-201ENST00000358161 CD69Q07108 199 aa8.67□□□□□ -1.02
SPTAN1-201ENST00000358161 HERPUD1Q15011 391 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms