RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 SLC35E3Q7Z769 313 aa11.74□□□□□ -0.53
CCNE1-202ENST00000357943 LINC01006Q8NI28 216 aa11.74□□□□□ -0.53
CCNE1-202ENST00000357943 COQ8AQ8NI60 647 aa11.74□□□□□ -0.53
CCNE1-202ENST00000357943 ST6GAL2Q96JF0 529 aa11.74□□□□□ -0.53
CCNE1-202ENST00000357943 FAM103A1Q9BTL3 118 aaKnown RBP11.74□□□□□ -0.53
CCNE1-202ENST00000357943 LINC00527Q9UJ94 153 aa11.74□□□□□ -0.53
CCNE1-202ENST00000357943 FBXO7Q9Y3I1 522 aa11.74□□□□□ -0.53
CCNE1-202ENST00000357943 MMP24Q9Y5R2 645 aa11.74□□□□□ -0.53
CCNE1-202ENST00000357943 TNCP24821 2201 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 E7EUB6 86 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 ADAP1O75689 374 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 NDUFA7O95182 113 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 CNIH1O95406 144 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 OPN1MWP04001 364 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 OPN1MW2P0DN77 364 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 OPN1MW3P0DN78 364 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 HLA-GP17693 338 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 VDAC1P21796 283 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 FXYD3Q14802 87 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 FCN2Q15485 313 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 NMSQ5H8A3 153 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 OR2T6Q8NHC8 308 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 LSM10Q969L4 123 aaKnown RBP11.73□□□□□ -0.53
CCNE1-202ENST00000357943 GPR146Q96CH1 333 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 NOL4LQ96MY1 436 aaPredicted RBP11.73□□□□□ -0.53
CCNE1-202ENST00000357943 PHB2Q99623 299 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 C16orf95Q9H693 158 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 SERTAD4Q9NUC0 356 aa11.73□□□□□ -0.53
CCNE1-202ENST00000357943 ATP6V0E1O15342 81 aa11.72□□□□□ -0.53
CCNE1-202ENST00000357943 KCNAB3O43448 404 aa11.72□□□□□ -0.53
CCNE1-202ENST00000357943 SSNA1O43805 119 aa11.72□□□□□ -0.53
CCNE1-202ENST00000357943 ACTL6BO94805 426 aa11.72□□□□□ -0.53
CCNE1-202ENST00000357943 SULT1A3P0DMM9 295 aa11.72□□□□□ -0.53
CCNE1-202ENST00000357943 SULT1A4P0DMN0 295 aa11.72□□□□□ -0.53
CCNE1-202ENST00000357943 EGR2P11161 476 aaPredicted RBP11.72□□□□□ -0.53
CCNE1-202ENST00000357943 MDKP21741 143 aaPredicted RBP11.72□□□□□ -0.53
CCNE1-202ENST00000357943 COMPP49747 757 aaPredicted RBP11.72□□□□□ -0.53
CCNE1-202ENST00000357943 ARSJQ5FYB0 599 aaPredicted RBP11.72□□□□□ -0.53
CCNE1-202ENST00000357943 UXS1Q8NBZ7 420 aa11.72□□□□□ -0.53
CCNE1-202ENST00000357943 GRPEL2Q8TAA5 225 aa11.72□□□□□ -0.53
CCNE1-202ENST00000357943 PARP11Q9NR21 331 aa11.72□□□□□ -0.53
CCNE1-202ENST00000357943 DUXBA0A1W2PPF3 345 aa11.71□□□□□ -0.53
CCNE1-202ENST00000357943 C15orf61A6NNL5 157 aa11.71□□□□□ -0.53
CCNE1-202ENST00000357943 MPTX1A8MV57 137 aa11.71□□□□□ -0.53
CCNE1-202ENST00000357943 SNAPC5O75971 98 aa11.71□□□□□ -0.53
CCNE1-202ENST00000357943 VDAC2P45880 294 aaPredicted RBP11.71□□□□□ -0.53
CCNE1-202ENST00000357943 GGNBP1Q5YKI7 109 aa11.71□□□□□ -0.53
CCNE1-202ENST00000357943 FAM219AQ8IW50 185 aa11.71□□□□□ -0.53
CCNE1-202ENST00000357943 C12orf45Q8N5I9 185 aaPredicted RBP11.71□□□□□ -0.53
CCNE1-202ENST00000357943 OR11H7Q8NGC8 314 aa11.71□□□□□ -0.53
CCNE1-202ENST00000357943 OR4F5Q8NH21 305 aa11.71□□□□□ -0.53
CCNE1-202ENST00000357943 OR4A16Q8NH70 328 aa11.71□□□□□ -0.53
CCNE1-202ENST00000357943 ABHD5Q8WTS1 349 aa11.71□□□□□ -0.53
CCNE1-202ENST00000357943 SRSF12Q8WXF0 261 aaKnown RBP11.71□□□□□ -0.53
CCNE1-202ENST00000357943 ARPC1AQ92747 370 aa11.71□□□□□ -0.53
CCNE1-202ENST00000357943 TMED3Q9Y3Q3 217 aa11.71□□□□□ -0.53
CCNE1-202ENST00000357943 A0A1B0GW64 132 aa11.71□□□□□ -0.54
CCNE1-202ENST00000357943 RBMXL2O75526 392 aaKnown RBP11.71□□□□□ -0.54
CCNE1-202ENST00000357943 IGF1P05019 195 aa11.71□□□□□ -0.54
CCNE1-202ENST00000357943 APELAP0DMC3 54 aa11.71□□□□□ -0.54
CCNE1-202ENST00000357943 CD83Q01151 205 aa11.71□□□□□ -0.54
CCNE1-202ENST00000357943 QTRT1Q9BXR0 403 aaKnown RBP11.71□□□□□ -0.54
CCNE1-202ENST00000357943 COMMD5Q9GZQ3 224 aa11.71□□□□□ -0.54
CCNE1-202ENST00000357943 RANGRFQ9HD47 186 aaPredicted RBP11.71□□□□□ -0.54
CCNE1-202ENST00000357943 TMEM14BQ9NUH8 114 aa11.71□□□□□ -0.54
CCNE1-202ENST00000357943 CACNG5Q9UF02 275 aa11.71□□□□□ -0.54
CCNE1-202ENST00000357943 PRNDQ9UKY0 176 aa11.71□□□□□ -0.54
CCNE1-202ENST00000357943 OR51B2Q9Y5P1 312 aa11.71□□□□□ -0.54
CCNE1-202ENST00000357943 PIGBOS1A0A0B4J2F0 54 aa11.7□□□□□ -0.54
CCNE1-202ENST00000357943 TEX50A0A1B0GTY4 177 aa11.7□□□□□ -0.54
CCNE1-202ENST00000357943 MSGN1A6NI15 193 aa11.7□□□□□ -0.54
CCNE1-202ENST00000357943 CGB1A6NKQ9 187 aa11.7□□□□□ -0.54
CCNE1-202ENST00000357943 G3V318 75 aa11.7□□□□□ -0.54
CCNE1-202ENST00000357943 AP4M1O00189 453 aa11.7□□□□□ -0.54
CCNE1-202ENST00000357943 FGF2P09038 288 aa11.7□□□□□ -0.54
CCNE1-202ENST00000357943 CXCL3P19876 107 aa11.7□□□□□ -0.54
CCNE1-202ENST00000357943 MAS1LP35410 378 aa11.7□□□□□ -0.54
CCNE1-202ENST00000357943 RPL27AP46776 148 aaKnown RBP11.7□□□□□ -0.54
CCNE1-202ENST00000357943 FOXRED2Q8IWF2 684 aa11.7□□□□□ -0.54
CCNE1-202ENST00000357943 STPG2Q8N412 459 aa11.7□□□□□ -0.54
CCNE1-202ENST00000357943 LFNGQ8NES3 379 aa11.7□□□□□ -0.54
CCNE1-202ENST00000357943 SGMS2Q8NHU3 365 aa11.7□□□□□ -0.54
CCNE1-202ENST00000357943 C19orf24Q9BVV8 132 aa11.7□□□□□ -0.54
CCNE1-202ENST00000357943 FOXA2Q9Y261 457 aaPredicted RBP11.7□□□□□ -0.54
CCNE1-202ENST00000357943 WSB1Q9Y6I7 421 aa11.7□□□□□ -0.54
CCNE1-202ENST00000357943 CCSO14618 274 aa11.69□□□□□ -0.54
CCNE1-202ENST00000357943 ST8SIA3O43173 380 aa11.69□□□□□ -0.54
CCNE1-202ENST00000357943 ECSCRQ19T08 205 aa11.69□□□□□ -0.54
CCNE1-202ENST00000357943 C2orf68Q2NKX9 166 aa11.69□□□□□ -0.54
CCNE1-202ENST00000357943 ZNF429Q86V71 674 aa11.69□□□□□ -0.54
CCNE1-202ENST00000357943 FYTTD1Q96QD9 318 aaKnown RBP11.69□□□□□ -0.54
CCNE1-202ENST00000357943 RNF114Q9Y508 228 aa11.69□□□□□ -0.54
CCNE1-202ENST00000357943 TMEM89A2RUT3 159 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 CLPSL1A2RUU4 121 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 TEX22C9J3V5 150 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 NXPH3O95157 252 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 RIPPLY3P57055 190 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 ASPHD1Q5U4P2 390 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 C10orf99Q6UWK7 81 aa11.68□□□□□ -0.54
CCNE1-202ENST00000357943 ZNF329Q86UD4 541 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms