RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 TRIB1Q96RU8 372 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 DLL3Q9NYJ7 618 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 CRIM1Q9NZV1 1036 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 BDP1A6H8Y1 2624 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 NTN3O00634 580 aaPredicted RBP8.41□□□□□ -1.06
RNF40-202ENST00000357890 RHBDL1O75783 438 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 IGKV1D-33P01593 117 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 IGKV1-33P01594 117 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 OR10J4P0C629 311 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 GPR6P46095 362 aaPredicted RBP8.41□□□□□ -1.06
RNF40-202ENST00000357890 FOXA3P55318 350 aaPredicted RBP8.41□□□□□ -1.06
RNF40-202ENST00000357890 B3GALT5-AS1P59052 145 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 TBC1D28Q2M2D7 210 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 KRTCAP3Q53RY4 240 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 NMSQ5H8A3 153 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 ASCL4Q6XD76 172 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 OR8B3Q8NGG8 313 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 C1QTNF5Q9BXJ0 243 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 HES7Q9BYE0 225 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 RNASE7Q9H1E1 156 aaKnown RBP8.41□□□□□ -1.06
RNF40-202ENST00000357890 CST9LQ9H4G1 147 aa8.41□□□□□ -1.06
RNF40-202ENST00000357890 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.4□□□□□ -1.06
RNF40-202ENST00000357890 OR5B21A6NL26 309 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 CELA3AP09093 270 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 LHX2P50458 406 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 OR1C1Q15619 314 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 ZNF114Q8NC26 417 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 SIGLEC12Q96PQ1 595 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 DEPPQ9NTK1 212 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 DMDP11532 3685 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 CA1P00915 261 aaPredicted RBP8.4□□□□□ -1.06
RNF40-202ENST00000357890 CRYBB3P26998 211 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 PMCHL1Q16048 86 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 OCIAD2Q56VL3 154 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 COA6Q5JTJ3 125 aaKnown RBP8.4□□□□□ -1.06
RNF40-202ENST00000357890 Q6ZSR3 168 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 OR2M7Q8NG81 312 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 DAZAP1Q96EP5 407 aaKnown RBP8.4□□□□□ -1.06
RNF40-202ENST00000357890 SMIM12Q96EX1 92 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 SGK494Q96LW2 274 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 REPIN1Q9BWE0 567 aaKnown RBP8.4□□□□□ -1.06
RNF40-202ENST00000357890 NPCDR1Q9BY65 106 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 USF3Q68DE3 2245 aa8.4□□□□□ -1.06
RNF40-202ENST00000357890 CPAMD8Q8IZJ3 1885 aa8.4□□□□□ -1.07
RNF40-202ENST00000357890 NEURL1O76050 574 aa8.4□□□□□ -1.07
RNF40-202ENST00000357890 CD1BP29016 333 aa8.4□□□□□ -1.07
RNF40-202ENST00000357890 PPOXP50336 477 aa8.4□□□□□ -1.07
RNF40-202ENST00000357890 PAX9P55771 341 aa8.4□□□□□ -1.07
RNF40-202ENST00000357890 FBXW9Q5XUX1 488 aa8.4□□□□□ -1.07
RNF40-202ENST00000357890 ZNF324BQ6AW86 544 aaPredicted RBP8.4□□□□□ -1.07
RNF40-202ENST00000357890 CRIP3Q6Q6R5 217 aa8.4□□□□□ -1.07
RNF40-202ENST00000357890 MCRIP2Q9BUT9 160 aaKnown RBP8.4□□□□□ -1.07
RNF40-202ENST00000357890 FNDC4Q9H6D8 234 aaPredicted RBP8.4□□□□□ -1.07
RNF40-202ENST00000357890 CLEC5AQ9NY25 188 aa8.4□□□□□ -1.07
RNF40-202ENST00000357890 MPC1Q9Y5U8 109 aa8.4□□□□□ -1.07
RNF40-202ENST00000357890 OR2T8A6NH00 312 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 PPIAL4DF5H284 164 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 KLRC4-KLRK1H3BQV0 150 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 FCGR3BO75015 233 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 GOSR1O95249 250 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 IGLC2P0DOY2 106 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 IGLC3P0DOY3 106 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 PLP1P60201 277 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 SLC25A34Q6PIV7 304 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 ZC2HC1AQ96GY0 325 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 IL36BQ9NZH7 164 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 SLC45A2Q9UMX9 530 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 CHEK1O14757 476 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 ZNF324O75467 553 aaPredicted RBP8.39□□□□□ -1.07
RNF40-202ENST00000357890 CDKN1BP46527 198 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 UBE2G1P62253 170 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 NRN1LQ496H8 165 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 MRGPRDQ8TDS7 321 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 TMEM45BQ96B21 275 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 KCNS1Q96KK3 526 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 HSD17B10Q99714 261 aaKnown RBP8.39□□□□□ -1.07
RNF40-202ENST00000357890 SH2D2AQ9NP31 389 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 HSPB7Q9UBY9 170 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 FRYQ5TBA9 3013 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 SPTBN1Q01082 2364 aaKnown RBP8.39□□□□□ -1.07
RNF40-202ENST00000357890 CD46P15529 392 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 RBX1P62877 108 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 RNPS1Q15287 305 aaKnown RBP8.39□□□□□ -1.07
RNF40-202ENST00000357890 TPRX1Q8N7U7 411 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 PSG11Q9UQ72 335 aa8.39□□□□□ -1.07
RNF40-202ENST00000357890 GPX1P07203 203 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 CA7P43166 264 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 CEBPDP49716 269 aaPredicted RBP8.38□□□□□ -1.07
RNF40-202ENST00000357890 GFRA1P56159 465 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 AARDQ4LEZ3 155 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 VWA1Q6PCB0 445 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 TEX43Q6ZNM6 134 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 TMEM191AQ9H0A3 160 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 KCNIP2Q9NS61 270 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 KLF13Q9Y2Y9 288 aaPredicted RBP8.38□□□□□ -1.07
RNF40-202ENST00000357890 OR4C46A6NHA9 309 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 J3QT63 122 aa8.38□□□□□ -1.07
RNF40-202ENST00000357890 RBFOX2O43251 390 aaKnown RBP eCLIP8.38□□□□□ -1.071e-7■■■■□ 26.4
RNF40-202ENST00000357890 TIMM8AO60220 97 aaPredicted RBP8.38□□□□□ -1.07
RNF40-202ENST00000357890 OR2H2O95918 312 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms