RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 RIF1Q5UIP0 2472 aaKnown RBP13.21□□□□□ -0.29
TRAPPC11-202ENST00000357207 SCO2A0A1W2PP80 73 aa13.21□□□□□ -0.29
TRAPPC11-202ENST00000357207 AHRRA9YTQ3 701 aa13.21□□□□□ -0.29
TRAPPC11-202ENST00000357207 EFEMP2O95967 443 aa13.21□□□□□ -0.29
TRAPPC11-202ENST00000357207 NRN1LQ496H8 165 aa13.21□□□□□ -0.29
TRAPPC11-202ENST00000357207 PCSK4Q6UW60 755 aa13.21□□□□□ -0.29
TRAPPC11-202ENST00000357207 PPP1R32Q7Z5V6 425 aa13.21□□□□□ -0.29
TRAPPC11-202ENST00000357207 OR4D5Q8NGN0 318 aa13.21□□□□□ -0.29
TRAPPC11-202ENST00000357207 ZNF71Q9NQZ8 489 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC11-202ENST00000357207 FOXA3P55318 350 aaPredicted RBP13.21□□□□□ -0.3
TRAPPC11-202ENST00000357207 PLP1P60201 277 aa13.21□□□□□ -0.3
TRAPPC11-202ENST00000357207 DMRTA1Q5VZB9 504 aa13.21□□□□□ -0.3
TRAPPC11-202ENST00000357207 J3KRW8 73 aa13.21□□□□□ -0.3
TRAPPC11-202ENST00000357207 IFNL4K9M1U5 179 aa13.21□□□□□ -0.3
TRAPPC11-202ENST00000357207 BTF3P20290 206 aaKnown RBP13.21□□□□□ -0.3
TRAPPC11-202ENST00000357207 GPX4P36969 197 aaPredicted RBP13.21□□□□□ -0.3
TRAPPC11-202ENST00000357207 TWIST1Q15672 202 aa13.21□□□□□ -0.3
TRAPPC11-202ENST00000357207 ARTNQ5T4W7 220 aa13.21□□□□□ -0.3
TRAPPC11-202ENST00000357207 OR10AG1Q8NH19 301 aa13.21□□□□□ -0.3
TRAPPC11-202ENST00000357207 CDX2Q99626 313 aaPredicted RBP13.21□□□□□ -0.3
TRAPPC11-202ENST00000357207 IGHV3-48P01763 117 aa13.2□□□□□ -0.3
TRAPPC11-202ENST00000357207 OR5R1Q8NH85 324 aa13.2□□□□□ -0.3
TRAPPC11-202ENST00000357207 C14orf144Q96I85 54 aa13.2□□□□□ -0.3
TRAPPC11-202ENST00000357207 NEU1Q99519 415 aa13.2□□□□□ -0.3
TRAPPC11-202ENST00000357207 HIST1H2BLQ99880 126 aa13.2□□□□□ -0.3
TRAPPC11-202ENST00000357207 TMEM70Q9BUB7 260 aa13.2□□□□□ -0.3
TRAPPC11-202ENST00000357207 TRBV24-1A0A075B6N3 115 aa13.2□□□□□ -0.3
TRAPPC11-202ENST00000357207 RPL39P5Q59GN2 51 aa13.2□□□□□ -0.3
TRAPPC11-202ENST00000357207 DIRC2Q96SL1 478 aa13.2□□□□□ -0.3
TRAPPC11-202ENST00000357207 FGF11Q92914 225 aa13.2□□□□□ -0.3
TRAPPC11-202ENST00000357207 ZNRF1Q8ND25 227 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 OR4C13Q8NGP0 309 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 IGLV3-12A0A075B6K2 115 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 H3BTX0 84 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 OR4A5Q8NH83 315 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 RAB37Q96AX2 223 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 WBP1Q96G27 269 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 CACNA1HO95180 2353 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 INTS1Q8N201 2190 aaKnown RBP13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 TRAV9-1A0A075B6T8 112 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 SRSF4Q08170 494 aaKnown RBP13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 C1QL4Q86Z23 238 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 MBD3L1Q8WWY6 194 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 GDF15Q99988 308 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 AP5S1Q9NUS5 200 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 PHF3Q92576 2039 aaKnown RBP13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 IGLV3-19P01714 112 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 LIPFP07098 398 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 CXCL1P09341 107 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 GCSHP23434 173 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 DGAT2L7PQ6IED9 249 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 HIST3H2BBQ8N257 126 aa13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 GTF3AQ92664 365 aaKnown RBP13.19□□□□□ -0.3
TRAPPC11-202ENST00000357207 C1QTNF9BB2RNN3 333 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 DLX1P56177 255 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 HBBP68871 147 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 ZNF841Q6ZN19 808 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 IMMP1LQ96LU5 166 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 TIMP4Q99727 224 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 IGKV3-7A0A075B6H7 116 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 SERF1AO75920 110 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 NAPSAO96009 420 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 CCDC144NLQ6NUI1 221 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 ZNF441Q8N8Z8 693 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 MIEN1Q9BRT3 115 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 TMEM106BQ9NUM4 274 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 PILRBQ9UKJ0 227 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 IGFBP2P18065 325 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 GUCD1Q96NT3 240 aa13.18□□□□□ -0.3
TRAPPC11-202ENST00000357207 E9PQ18 207 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 MGPP08493 103 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 TNFSF10P50591 281 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 STARD6P59095 220 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 TMEM30BQ3MIR4 351 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 GFI1BQ5VTD9 330 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 ACP7Q6ZNF0 438 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 SHISA5Q8N114 240 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 TMEM242Q9NWH2 141 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 SIP14410 1827 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 NBASA2RRP1 2371 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 F2RL2O00254 374 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 C1QTNF9P0C862 333 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 WDR31Q8NA23 367 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 OR13A1Q8NGR1 328 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 KCNS1Q96KK3 526 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 KLHDC3Q9BQ90 382 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 PRDM13Q9H4Q3 707 aa13.17□□□□□ -0.3
TRAPPC11-202ENST00000357207 IGLV3-32A0A0A0MS00 114 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 CD55P08174 381 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 FCGR2BP31994 310 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 FOXC1Q12948 553 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 CELA3AP09093 270 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 GOLT1AQ6ZVE7 132 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 PLPPR1Q8TBJ4 325 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 IGKV1-12A0A0C4DH73 117 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 IGKV1D-12P01611 117 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 ERVFRD-1P60508 538 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 Q6ZT83 130 aa13.16□□□□□ -0.3
TRAPPC11-202ENST00000357207 FAM19A2Q8N3H0 131 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms