RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 CISD2Q8N5K1 135 aaKnown RBP12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 OR10D4PQ8NGN7 298 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 FAM57AQ8TBR7 257 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 ACY3Q96HD9 319 aa12.74□□□□□ -0.37
TNFSF13-202ENST00000349228 GTF3C1Q12789 2109 aa12.73□□□□□ -0.37
TNFSF13-202ENST00000349228 TRAV3A0A0B4J244 114 aa12.73□□□□□ -0.37
TNFSF13-202ENST00000349228 TRAV38-1A0A0B4J264 116 aa12.73□□□□□ -0.37
TNFSF13-202ENST00000349228 A8MXE2 369 aa12.73□□□□□ -0.37
TNFSF13-202ENST00000349228 RPL29P47914 159 aaKnown RBP12.73□□□□□ -0.37
TNFSF13-202ENST00000349228 TEX36Q5VZQ5 186 aa12.73□□□□□ -0.37
TNFSF13-202ENST00000349228 CST9LP1Q5W188 147 aa12.73□□□□□ -0.37
TNFSF13-202ENST00000349228 OR4A47Q6IF82 309 aa12.73□□□□□ -0.37
TNFSF13-202ENST00000349228 VKORC1L1Q8N0U8 176 aa12.73□□□□□ -0.37
TNFSF13-202ENST00000349228 SLC24A4Q8NFF2 622 aa12.73□□□□□ -0.37
TNFSF13-202ENST00000349228 GAFA1Q96PS6 74 aa12.73□□□□□ -0.37
TNFSF13-202ENST00000349228 FKBP11Q9NYL4 201 aa12.73□□□□□ -0.37
TNFSF13-202ENST00000349228 USF3Q68DE3 2245 aa12.73□□□□□ -0.37
TNFSF13-202ENST00000349228 NPPCP23582 126 aa12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 CD40P25942 277 aa12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 RHOBP62745 196 aa12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 TMEM183AQ8IXX5 376 aa12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 PFDN5Q99471 154 aa12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 SSUH2Q9Y2M2 353 aa12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 hADV38S2A0JD32 116 aa12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 IL6RP08887 468 aaPredicted RBP12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 GNB1P62873 340 aa12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 RTL8BQ17RB0 113 aa12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 LINC01551Q86U37 167 aa12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 LYG1Q8N1E2 194 aa12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 ZNF383Q8NA42 475 aa12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 TMEM170AQ8WVE7 144 aa12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 RPUSD1Q9UJJ7 312 aaKnown RBP12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 ARL2-SNX15V9GYD0 113 aa12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 PTPRBP23467 1997 aa12.72□□□□□ -0.37
TNFSF13-202ENST00000349228 CHD3Q12873 2000 aaKnown RBP12.71□□□□□ -0.37
TNFSF13-202ENST00000349228 MEF2CQ06413 473 aaPredicted RBP12.71□□□□□ -0.37
TNFSF13-202ENST00000349228 GCSAMLQ5JQS6 135 aa12.71□□□□□ -0.37
TNFSF13-202ENST00000349228 SLC25A48Q6ZT89 311 aaKnown RBP12.71□□□□□ -0.37
TNFSF13-202ENST00000349228 PATZ1Q9HBE1 687 aaKnown RBP12.71□□□□□ -0.37
TNFSF13-202ENST00000349228 ARL14EPLP0DKL9 152 aa12.71□□□□□ -0.38
TNFSF13-202ENST00000349228 TNFRSF1AP19438 455 aa12.71□□□□□ -0.38
TNFSF13-202ENST00000349228 FOXL1Q12952 345 aa12.71□□□□□ -0.38
TNFSF13-202ENST00000349228 C4orf17Q53FE4 359 aa12.71□□□□□ -0.38
TNFSF13-202ENST00000349228 MIC13Q5XKP0 118 aa12.71□□□□□ -0.38
TNFSF13-202ENST00000349228 TMEM108Q6UXF1 575 aa12.71□□□□□ -0.38
TNFSF13-202ENST00000349228 C1orf229Q6ZS94 237 aaPredicted RBP12.71□□□□□ -0.38
TNFSF13-202ENST00000349228 RBMXL3Q8N7X1 1067 aaKnown RBP12.71□□□□□ -0.38
TNFSF13-202ENST00000349228 NECAP1Q8NC96 275 aa12.71□□□□□ -0.38
TNFSF13-202ENST00000349228 ELOVL5Q9NYP7 299 aa12.71□□□□□ -0.38
TNFSF13-202ENST00000349228 OR51B2Q9Y5P1 312 aa12.71□□□□□ -0.38
TNFSF13-202ENST00000349228 LINC00312Q9Y6C7 94 aa12.71□□□□□ -0.38
TNFSF13-202ENST00000349228 CACNA1DQ01668 2161 aa12.7□□□□□ -0.38
TNFSF13-202ENST00000349228 COL6A3P12111 3177 aa12.7□□□□□ -0.38
TNFSF13-202ENST00000349228 NKX6-3A6NJ46 265 aa12.7□□□□□ -0.38
TNFSF13-202ENST00000349228 UPK2O00526 184 aa12.7□□□□□ -0.38
TNFSF13-202ENST00000349228 NDUFB4O95168 129 aa12.7□□□□□ -0.38
TNFSF13-202ENST00000349228 IGHV3-7P01780 117 aa12.7□□□□□ -0.38
TNFSF13-202ENST00000349228 HIST1H1BP16401 226 aaKnown RBP12.7□□□□□ -0.38
TNFSF13-202ENST00000349228 GFI1BQ5VTD9 330 aa12.7□□□□□ -0.38
TNFSF13-202ENST00000349228 RNASEH2CQ8TDP1 164 aaKnown RBP12.7□□□□□ -0.38
TNFSF13-202ENST00000349228 PCGF1Q9BSM1 259 aa12.7□□□□□ -0.38
TNFSF13-202ENST00000349228 BDP1A6H8Y1 2624 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 CA2P00918 260 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 FABP4P15090 132 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 ATP5G3P48201 142 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 PRCDQ00LT1 54 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 ARSJQ5FYB0 599 aaPredicted RBP12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 ACTL10Q5JWF8 245 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 FAM201AQ5SY85 155 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 RPRMLQ8N4K4 120 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 OR1P1Q8NH06 330 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 NEUROG1Q92886 237 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 LEAP2Q969E1 77 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 CCL13Q99616 98 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 C19orf24Q9BVV8 132 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 GAL3ST2Q9H3Q3 398 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 LY96Q9Y6Y9 160 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 A0A1W2PPQ1 181 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 J3QR06 171 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 DVL1O14640 695 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 GCHFRP30047 84 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 PLA2G5P39877 138 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 PDLIM4P50479 330 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 UBE2G2P60604 165 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 FAM27E3Q08E93 113 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 EFNB3Q15768 340 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 TCF23Q7RTU1 214 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 ZCCHC14Q8WYQ9 949 aaKnown RBP12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 PACRGQ96M98 296 aaPredicted RBP12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 HIST1H2BLQ99880 126 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 PLEKHA3Q9HB20 300 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 SLC35D1Q9NTN3 355 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 BET1LQ9NYM9 111 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 SLC25A10Q9UBX3 287 aaPredicted RBP12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 TP53TG5Q9Y2B4 290 aa12.69□□□□□ -0.38
TNFSF13-202ENST00000349228 AREGP15514 252 aa12.68□□□□□ -0.38
TNFSF13-202ENST00000349228 PRR20EP86478 221 aa12.68□□□□□ -0.38
TNFSF13-202ENST00000349228 PRR20CP86479 221 aa12.68□□□□□ -0.38
TNFSF13-202ENST00000349228 PRR20DP86480 221 aa12.68□□□□□ -0.38
TNFSF13-202ENST00000349228 PRR20BP86481 221 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms