RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 ACTR3CQ9C0K3 210 aaPredicted RBP16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 BET1LQ9NYM9 111 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 A0A087X0M5 115 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 A0A1B0GX30 115 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 H0YJW9 148 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 SOX15O60248 233 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 OR10X1Q8NGY0 326 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 P2RX4Q99571 388 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 TMEM204Q9BSN7 226 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 SLC25A22Q9H936 323 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 VAX2Q9UIW0 290 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 TRBV23-1A0A0A0MS06 115 aa16.59■□□□□ 0.25
CHRNA3-202ENST00000348639 IFNA4P05014 189 aa16.59■□□□□ 0.25
CHRNA3-202ENST00000348639 TREML4Q6UXN2 200 aa16.59■□□□□ 0.25
CHRNA3-202ENST00000348639 RBMS3Q6XE24 437 aaKnown RBP16.59■□□□□ 0.25
CHRNA3-202ENST00000348639 SLC24A4Q8NFF2 622 aa16.59■□□□□ 0.25
CHRNA3-202ENST00000348639 TMEM186Q96B77 213 aa16.59■□□□□ 0.25
CHRNA3-202ENST00000348639 SMCO3A2RU48 225 aa16.58■□□□□ 0.25
CHRNA3-202ENST00000348639 COL8A2P25067 703 aa16.58■□□□□ 0.25
CHRNA3-202ENST00000348639 NPY1RP25929 384 aa16.58■□□□□ 0.25
CHRNA3-202ENST00000348639 FLI1Q01543 452 aaPredicted RBP16.58■□□□□ 0.25
CHRNA3-202ENST00000348639 ACOT6Q3I5F7 207 aaPredicted RBP16.58■□□□□ 0.25
CHRNA3-202ENST00000348639 CYB5BO43169 146 aa16.58■□□□□ 0.24
CHRNA3-202ENST00000348639 KBTBD11O94819 623 aa16.58■□□□□ 0.24
CHRNA3-202ENST00000348639 SAA1P0DJI8 122 aaPredicted RBP16.58■□□□□ 0.24
CHRNA3-202ENST00000348639 PPOXP50336 477 aa16.58■□□□□ 0.24
CHRNA3-202ENST00000348639 NIPSNAP3BQ9BS92 247 aa16.58■□□□□ 0.24
CHRNA3-202ENST00000348639 FKBP11Q9NYL4 201 aa16.58■□□□□ 0.24
CHRNA3-202ENST00000348639 MLXQ9UH92 298 aa16.58■□□□□ 0.24
CHRNA3-202ENST00000348639 ABCA4P78363 2273 aa16.58■□□□□ 0.24
CHRNA3-202ENST00000348639 TPRP12270 2363 aaKnown RBP16.58■□□□□ 0.24
CHRNA3-202ENST00000348639 EIF3GO75821 320 aaKnown RBP eCLIP16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 IGHV1-8P0DP01 117 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 MYOD1P15172 320 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 ZNF137PP52743 207 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 PRCDQ00LT1 54 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 TMEM177Q53S58 311 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 AVPI1Q5T686 147 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 FAM122CQ6P4D5 195 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 OR9G1Q8NH87 305 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 RAB24Q969Q5 203 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 ST6GALNAC6Q969X2 333 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 CA2P00918 260 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 FAM90A2PQ658T7 463 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 SLC35E3Q7Z769 313 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 C11orf42Q8N5U0 333 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 TVP23CQ96ET8 276 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 HARBI1Q96MB7 349 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 PLEKHA3Q9HB20 300 aa16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 RALYQ9UKM9 306 aaKnown RBP16.57■□□□□ 0.24
CHRNA3-202ENST00000348639 CRYBA1P05813 215 aa16.56■□□□□ 0.24
CHRNA3-202ENST00000348639 OPRK1P41145 380 aa16.56■□□□□ 0.24
CHRNA3-202ENST00000348639 OR5B3Q8NH48 314 aa16.56■□□□□ 0.24
CHRNA3-202ENST00000348639 FLYWCH2Q96CP2 140 aaKnown RBP16.56■□□□□ 0.24
CHRNA3-202ENST00000348639 NABP2Q9BQ15 211 aa16.56■□□□□ 0.24
CHRNA3-202ENST00000348639 HINT2Q9BX68 163 aa16.56■□□□□ 0.24
CHRNA3-202ENST00000348639 NPVFQ9HCQ7 196 aa16.56■□□□□ 0.24
CHRNA3-202ENST00000348639 TEX50A0A1B0GTY4 177 aa16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 SEC14L6B5MCN3 397 aa16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 HMGB3O15347 200 aaKnown RBP16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 IGHV2-70P01814 119 aa16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 TAGLN2P37802 199 aaKnown RBP16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 REG1BP48304 166 aa16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 SMUG1Q53HV7 270 aa16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 PDPNQ86YL7 162 aa16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 HIST1H2BAQ96A08 127 aa16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 MGST2Q99735 147 aa16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 LSM4Q9Y4Z0 139 aaKnown RBP16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 MT-ND4LP03901 98 aa16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 FOLR2P14207 255 aa16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 CDC34P49427 236 aaPredicted RBP16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 ZNF841Q6ZN19 808 aa16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 OR4C13Q8NGP0 309 aa16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 ISOC2Q96AB3 205 aa16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 TMPRSS5Q9H3S3 457 aa16.55■□□□□ 0.24
CHRNA3-202ENST00000348639 DIAPH2-AS1Q14236 149 aa16.54■□□□□ 0.24
CHRNA3-202ENST00000348639 ARSJQ5FYB0 599 aaPredicted RBP16.54■□□□□ 0.24
CHRNA3-202ENST00000348639 PCGF1Q9BSM1 259 aa16.54■□□□□ 0.24
CHRNA3-202ENST00000348639 GGTLC1Q9BX51 225 aa16.54■□□□□ 0.24
CHRNA3-202ENST00000348639 TMEM133Q9H2Q1 129 aa16.54■□□□□ 0.24
CHRNA3-202ENST00000348639 DCHS2Q6V1P9 2916 aa16.54■□□□□ 0.24
CHRNA3-202ENST00000348639 A0A087WWC5 75 aa16.53■□□□□ 0.24
CHRNA3-202ENST00000348639 A0A1W2PPE2 198 aa16.53■□□□□ 0.24
CHRNA3-202ENST00000348639 FNDC10F2Z333 226 aa16.53■□□□□ 0.24
CHRNA3-202ENST00000348639 PSMB3P49720 205 aa16.53■□□□□ 0.24
CHRNA3-202ENST00000348639 ATP5IP56385 69 aaPredicted RBP16.53■□□□□ 0.24
CHRNA3-202ENST00000348639 MEF2BQ02080 365 aaPredicted RBP16.53■□□□□ 0.24
CHRNA3-202ENST00000348639 RAB1CQ92928 201 aa16.53■□□□□ 0.24
CHRNA3-202ENST00000348639 C1orf159Q96HA4 380 aa16.53■□□□□ 0.24
CHRNA3-202ENST00000348639 MANBALQ9NQG1 85 aa16.53■□□□□ 0.24
CHRNA3-202ENST00000348639 CD81P60033 236 aa16.53■□□□□ 0.24
CHRNA3-202ENST00000348639 RNF212Q495C1 297 aa16.53■□□□□ 0.24
CHRNA3-202ENST00000348639 A0A1W2PPH5 198 aa16.52■□□□□ 0.24
CHRNA3-202ENST00000348639 NDUFS6O75380 124 aaKnown RBP16.52■□□□□ 0.24
CHRNA3-202ENST00000348639 LY6HO94772 140 aa16.52■□□□□ 0.24
CHRNA3-202ENST00000348639 YIF1AO95070 293 aa16.52■□□□□ 0.24
CHRNA3-202ENST00000348639 OPN1MWP04001 364 aa16.52■□□□□ 0.24
CHRNA3-202ENST00000348639 OPN1MW2P0DN77 364 aa16.52■□□□□ 0.24
CHRNA3-202ENST00000348639 OPN1MW3P0DN78 364 aa16.52■□□□□ 0.24
CHRNA3-202ENST00000348639 CTRB1P17538 263 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms