RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 TMPRSS3P57727 454 aa15.42■□□□□ 0.06
SMPD1-201ENST00000342245 OR2T6Q8NHC8 308 aa15.42■□□□□ 0.06
SMPD1-201ENST00000342245 SIGMAR1Q99720 223 aa15.42■□□□□ 0.06
SMPD1-201ENST00000342245 PRDM14Q9GZV8 571 aa15.42■□□□□ 0.06
SMPD1-201ENST00000342245 NPVFQ9HCQ7 196 aa15.42■□□□□ 0.06
SMPD1-201ENST00000342245 TMEM167BQ9NRX6 74 aa15.42■□□□□ 0.06
SMPD1-201ENST00000342245 OR5AL1P0C617 328 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 TCL1AP56279 114 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 C9orf135Q5VTT2 229 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 H2BFWTQ7Z2G1 175 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 ZNF645Q8N7E2 425 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 ZDHHC16Q969W1 377 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 OR2V2Q96R30 315 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 GGTLC1Q9BX51 225 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 C1QTNF5Q9BXJ0 243 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 SZT2Q5T011 3432 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 PPIAL4EA0A075B759 164 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 PPIAL4CA0A0B4J2A2 164 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 PPIAL4DF5H284 164 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 SMPD2O60906 423 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 PPIAL4FP0DN26 164 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 SLC35B1P78383 322 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 ZNF542PQ5EBM4 170 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 FADS6Q8N9I5 356 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 CRIM1Q9NZV1 1036 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 SLC25A10Q9UBX3 287 aaPredicted RBP15.41■□□□□ 0.06
SMPD1-201ENST00000342245 SPAG17Q6Q759 2223 aa15.41■□□□□ 0.06
SMPD1-201ENST00000342245 SPTY2D1-AS1A0A0U1RR47 76 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 AZU1P20160 251 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 GPM6AP51674 278 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 C1orf61Q13536 156 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 TREML4Q6UXN2 200 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 DOLPP1Q86YN1 238 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 OR10W1Q8NGF6 305 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 OR2H1Q9GZK4 316 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 JKAMPQ9P055 326 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 TRAV24A0A0B4J272 114 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 EPOPA6NHQ4 379 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 HTR1DP28221 377 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 GFERP55789 205 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 RAB31Q13636 194 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 FXYD3Q14802 87 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 TMEM97Q5BJF2 176 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 BPIFA4PQ86YQ2 179 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 NFAM1Q8NET5 270 aaPredicted RBP15.4■□□□□ 0.06
SMPD1-201ENST00000342245 ZNF48Q96MX3 618 aaPredicted RBP15.4■□□□□ 0.06
SMPD1-201ENST00000342245 HS3ST6Q96QI5 342 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 TRIB1Q96RU8 372 aa15.4■□□□□ 0.06
SMPD1-201ENST00000342245 SSBP4Q9BWG4 385 aaPredicted RBP15.4■□□□□ 0.06
SMPD1-201ENST00000342245 hDV102S1A0JD36 115 aa15.39■□□□□ 0.05
SMPD1-201ENST00000342245 PLP1P60201 277 aa15.39■□□□□ 0.05
SMPD1-201ENST00000342245 TAAR6Q96RI8 345 aa15.39■□□□□ 0.05
SMPD1-201ENST00000342245 MGST2Q99735 147 aa15.39■□□□□ 0.05
SMPD1-201ENST00000342245 DLL3Q9NYJ7 618 aa15.39■□□□□ 0.05
SMPD1-201ENST00000342245 CLCF1Q9UBD9 225 aa15.39■□□□□ 0.05
SMPD1-201ENST00000342245 ZNF835Q9Y2P0 537 aa15.39■□□□□ 0.05
SMPD1-201ENST00000342245 RBMXL2O75526 392 aaKnown RBP15.39■□□□□ 0.05
SMPD1-201ENST00000342245 GABRA6Q16445 453 aa15.39■□□□□ 0.05
SMPD1-201ENST00000342245 ATP5L2Q7Z4Y8 100 aa15.39■□□□□ 0.05
SMPD1-201ENST00000342245 OR2K2Q8NGT1 345 aa15.39■□□□□ 0.05
SMPD1-201ENST00000342245 FNDC4Q9H6D8 234 aaPredicted RBP15.39■□□□□ 0.05
SMPD1-201ENST00000342245 SERTAD4Q9NUC0 356 aa15.39■□□□□ 0.05
SMPD1-201ENST00000342245 TP73-AS1Q9UF72 201 aa15.39■□□□□ 0.05
SMPD1-201ENST00000342245 LEPROTL1O95214 131 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 COX8AP10176 69 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 RPS16P62249 146 aaKnown RBP15.38■□□□□ 0.05
SMPD1-201ENST00000342245 RTL8BQ17RB0 113 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 FAM120AOSQ5T036 256 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 MIC13Q5XKP0 118 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 NPFFR1Q9GZQ6 430 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 DEPPQ9NTK1 212 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 RP1P56715 2156 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 A0A087X0K7 114 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 A0A1B0GX78 115 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 ZIC3O60481 467 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 NEURL1O76050 574 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 GOSR1O95249 250 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 ARL4DP49703 201 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 PPOXP50336 477 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 EFNB3Q15768 340 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 WDR82Q6UXN9 313 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 ZNF837Q96EG3 531 aaPredicted RBP15.38■□□□□ 0.05
SMPD1-201ENST00000342245 MAP1LC3CQ9BXW4 147 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 SH2D2AQ9NP31 389 aa15.38■□□□□ 0.05
SMPD1-201ENST00000342245 FAM231DQ6ZW35 169 aa15.37■□□□□ 0.05
SMPD1-201ENST00000342245 GRAMD2BQ96HH9 432 aa15.37■□□□□ 0.05
SMPD1-201ENST00000342245 CLEC5AQ9NY25 188 aa15.37■□□□□ 0.05
SMPD1-201ENST00000342245 F5P12259 2224 aa15.37■□□□□ 0.05
SMPD1-201ENST00000342245 IGHV3-20A0A0C4DH32 117 aa15.37■□□□□ 0.05
SMPD1-201ENST00000342245 PSMB11A5LHX3 300 aa15.37■□□□□ 0.05
SMPD1-201ENST00000342245 C21orf140B9A014 251 aa15.37■□□□□ 0.05
SMPD1-201ENST00000342245 ZNF816Q0VGE8 651 aaPredicted RBP15.37■□□□□ 0.05
SMPD1-201ENST00000342245 SLC35E4Q6ICL7 350 aa15.37■□□□□ 0.05
SMPD1-201ENST00000342245 SYT13Q7L8C5 426 aa15.37■□□□□ 0.05
SMPD1-201ENST00000342245 KIR3DL3Q8N743 410 aa15.37■□□□□ 0.05
SMPD1-201ENST00000342245 PRDM6Q9NQX0 595 aa15.37■□□□□ 0.05
SMPD1-201ENST00000342245 PLSCR4Q9NRQ2 329 aa15.37■□□□□ 0.05
SMPD1-201ENST00000342245 HIST1H1EP10412 219 aaKnown RBP15.36■□□□□ 0.05
SMPD1-201ENST00000342245 TMEM92Q6UXU6 159 aa15.36■□□□□ 0.05
SMPD1-201ENST00000342245 FAM216AQ8WUB2 273 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms