RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SELENOKQ9Y6D0 94 aa11.72□□□□□ -0.53
LINC01116-202ENST00000339037 ZNF320A2RRD8 509 aa11.71□□□□□ -0.53
LINC01116-202ENST00000339037 TMEM213A2RRL7 107 aa11.71□□□□□ -0.53
LINC01116-202ENST00000339037 A8MWP6 167 aa11.71□□□□□ -0.53
LINC01116-202ENST00000339037 KBTBD11O94819 623 aa11.71□□□□□ -0.53
LINC01116-202ENST00000339037 IGHV3-23P01764 117 aa11.71□□□□□ -0.53
LINC01116-202ENST00000339037 EIF4EBP1Q13541 118 aaPredicted RBP11.71□□□□□ -0.53
LINC01116-202ENST00000339037 NEDD8Q15843 81 aa11.71□□□□□ -0.53
LINC01116-202ENST00000339037 FAM106AQ4KMX7 169 aa11.71□□□□□ -0.53
LINC01116-202ENST00000339037 CLEC19AQ6UXS0 136 aa11.71□□□□□ -0.53
LINC01116-202ENST00000339037 OR4S2Q8NH73 311 aa11.71□□□□□ -0.53
LINC01116-202ENST00000339037 FYTTD1Q96QD9 318 aaKnown RBP11.71□□□□□ -0.53
LINC01116-202ENST00000339037 CXorf65A6NEN9 183 aa11.7□□□□□ -0.54
LINC01116-202ENST00000339037 SLC22A5O76082 557 aa11.7□□□□□ -0.54
LINC01116-202ENST00000339037 DHFRP00374 187 aa11.7□□□□□ -0.54
LINC01116-202ENST00000339037 IL6RP08887 468 aaPredicted RBP11.7□□□□□ -0.54
LINC01116-202ENST00000339037 PTHLHP12272 177 aa11.7□□□□□ -0.54
LINC01116-202ENST00000339037 RPL27AP46776 148 aaKnown RBP11.7□□□□□ -0.54
LINC01116-202ENST00000339037 ANKRD55Q3KP44 614 aa11.7□□□□□ -0.54
LINC01116-202ENST00000339037 IDNKQ5T6J7 187 aa11.7□□□□□ -0.54
LINC01116-202ENST00000339037 GVQW1Q8N7I0 195 aa11.7□□□□□ -0.54
LINC01116-202ENST00000339037 FANCD2OSQ96PS1 177 aa11.7□□□□□ -0.54
LINC01116-202ENST00000339037 OR2A7Q96R45 310 aa11.7□□□□□ -0.54
LINC01116-202ENST00000339037 GPHA2Q96T91 129 aa11.7□□□□□ -0.54
LINC01116-202ENST00000339037 OVOL2Q9BRP0 275 aa11.7□□□□□ -0.54
LINC01116-202ENST00000339037 SLC2A9Q9NRM0 540 aa11.7□□□□□ -0.54
LINC01116-202ENST00000339037 MLXQ9UH92 298 aa11.7□□□□□ -0.54
LINC01116-202ENST00000339037 ETV7Q9Y603 341 aa11.7□□□□□ -0.54
LINC01116-202ENST00000339037 S4R3C0 116 aa11.7□□□□□ -0.54
LINC01116-202ENST00000339037 TRAV18A0A075B6X5 111 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 LOC102724200A0A096LPH7 203 aaPredicted RBP11.69□□□□□ -0.54
LINC01116-202ENST00000339037 SCAF4O95104 1147 aaKnown RBP11.69□□□□□ -0.54
LINC01116-202ENST00000339037 NDUFB8O95169 186 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 LY6G6CO95867 125 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 AREGP15514 252 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 MAS1LP35410 378 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 SCAND1P57086 179 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 BRWD1-AS2P59051 145 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 PMS2P11Q13670 270 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 OR4A47Q6IF82 309 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 UXS1Q8NBZ7 420 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 BEST4Q8NFU0 473 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 TMEM167AQ8TBQ9 72 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 TCTEX1D2Q8WW35 142 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 EEF1AKMT3Q96AZ1 226 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 HSD17B10Q99714 261 aaKnown RBP11.69□□□□□ -0.54
LINC01116-202ENST00000339037 TAS2R8Q9NYW2 309 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 SPATA2Q9UM82 520 aa11.69□□□□□ -0.54
LINC01116-202ENST00000339037 A0A1B0GW64 132 aa11.68□□□□□ -0.54
LINC01116-202ENST00000339037 E7EUB6 86 aa11.68□□□□□ -0.54
LINC01116-202ENST00000339037 CRYGCP07315 174 aa11.68□□□□□ -0.54
LINC01116-202ENST00000339037 ZNF735P0CB33 412 aa11.68□□□□□ -0.54
LINC01116-202ENST00000339037 DEFA4P12838 97 aa11.68□□□□□ -0.54
LINC01116-202ENST00000339037 PSMB6P28072 239 aa11.68□□□□□ -0.54
LINC01116-202ENST00000339037 TGFBR1P36897 503 aa11.68□□□□□ -0.54
LINC01116-202ENST00000339037 ARPC4P59998 168 aa11.68□□□□□ -0.54
LINC01116-202ENST00000339037 KCTD21Q4G0X4 260 aa11.68□□□□□ -0.54
LINC01116-202ENST00000339037 BTNL8Q6UX41 500 aa11.68□□□□□ -0.54
LINC01116-202ENST00000339037 PUSL1Q8N0Z8 303 aaKnown RBP11.68□□□□□ -0.54
LINC01116-202ENST00000339037 NUPR2A6NF83 97 aa11.67□□□□□ -0.54
LINC01116-202ENST00000339037 FCER2P06734 321 aa11.67□□□□□ -0.54
LINC01116-202ENST00000339037 HIST1H1BP16401 226 aaKnown RBP11.67□□□□□ -0.54
LINC01116-202ENST00000339037 RPL8P62917 257 aaKnown RBP11.67□□□□□ -0.54
LINC01116-202ENST00000339037 TM4SF20Q53R12 229 aa11.67□□□□□ -0.54
LINC01116-202ENST00000339037 HOGA1Q86XE5 327 aa11.67□□□□□ -0.54
LINC01116-202ENST00000339037 MFSD4AQ8N468 514 aa11.67□□□□□ -0.54
LINC01116-202ENST00000339037 CCL28Q9NRJ3 127 aa11.67□□□□□ -0.54
LINC01116-202ENST00000339037 TRBV7-1A0A0A6YYK4 115 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 A0A0J9YWU9 116 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 TNFSF12O43508 249 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 HRASP01112 189 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 REG1AP05451 166 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 CTRB1P17538 263 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 FCGR2CP31995 323 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 KLK9Q2XQG4 91 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 CTRB2Q6GPI1 263 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 RBPMS2Q6ZRY4 209 aaKnown RBP11.66□□□□□ -0.54
LINC01116-202ENST00000339037 SSX9Q7RTT3 188 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 OR1L6Q8NGR2 347 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 OR13F1Q8NGS4 319 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 SECTM1Q8WVN6 248 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 MARC2Q969Z3 335 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 CXorf58Q96LI9 332 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 AUNIPQ9H7T9 357 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 KLK9Q9UKQ9 250 aa11.66□□□□□ -0.54
LINC01116-202ENST00000339037 DNAH10Q8IVF4 4471 aa11.65□□□□□ -0.54
LINC01116-202ENST00000339037 IGLV11-55A0A075B6I3 123 aa11.65□□□□□ -0.54
LINC01116-202ENST00000339037 A0A0A6YYH2 397 aa11.65□□□□□ -0.54
LINC01116-202ENST00000339037 TRAV25A0A0B4J276 109 aa11.65□□□□□ -0.54
LINC01116-202ENST00000339037 MEIS3P1A6NDR6 274 aa11.65□□□□□ -0.54
LINC01116-202ENST00000339037 MFSD2BA6NFX1 497 aa11.65□□□□□ -0.54
LINC01116-202ENST00000339037 A6NJ64 397 aa11.65□□□□□ -0.54
LINC01116-202ENST00000339037 PPYP01298 95 aa11.65□□□□□ -0.54
LINC01116-202ENST00000339037 CLEC3BP05452 202 aa11.65□□□□□ -0.54
LINC01116-202ENST00000339037 HLA-GP17693 338 aa11.65□□□□□ -0.54
LINC01116-202ENST00000339037 UNQ9165/PRO28630Q6UXU0 137 aa11.65□□□□□ -0.54
LINC01116-202ENST00000339037 ZNF66Q6ZN08 573 aa11.65□□□□□ -0.54
LINC01116-202ENST00000339037 MYOD1P15172 320 aa11.64□□□□□ -0.55
LINC01116-202ENST00000339037 GPR183P32249 361 aa11.64□□□□□ -0.55
LINC01116-202ENST00000339037 BMI1P35226 326 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms